RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 RREB1Q92766 1687 aa21.05■□□□□ 0.96
NDE1-203ENST00000570727 PEAK1Q9H792 1746 aa21.05■□□□□ 0.96
NDE1-203ENST00000570727 C11orf95C9JLR9 678 aaPredicted RBP21.04■□□□□ 0.96
NDE1-203ENST00000570727 DDB1Q16531 1140 aa21.04■□□□□ 0.96
NDE1-203ENST00000570727 SBF2Q86WG5 1849 aa21.04■□□□□ 0.96
NDE1-203ENST00000570727 NUP188Q5SRE5 1749 aa21.03■□□□□ 0.96
NDE1-203ENST00000570727 MON2Q7Z3U7 1717 aa21.03■□□□□ 0.96
NDE1-203ENST00000570727 NFAT5O94916 1531 aa21.03■□□□□ 0.96
NDE1-203ENST00000570727 CD163L1Q9NR16 1453 aa21.02■□□□□ 0.96
NDE1-203ENST00000570727 CARD10Q9BWT7 1032 aa21.02■□□□□ 0.96
NDE1-203ENST00000570727 LRRC37A3O60309 1634 aa21.02■□□□□ 0.96
NDE1-203ENST00000570727 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.01■□□□□ 0.95
NDE1-203ENST00000570727 SLC12A5Q9H2X9 1139 aa21.01■□□□□ 0.95
NDE1-203ENST00000570727 OVOS2A0A0G2JMS6 1433 aa21.01■□□□□ 0.95
NDE1-203ENST00000570727 OVOS2A0A0J9YW53 1432 aa21.01■□□□□ 0.95
NDE1-203ENST00000570727 OVOS2Q6IE36 1432 aa21.01■□□□□ 0.95
NDE1-203ENST00000570727 WNK3Q9BYP7 1800 aa21.01■□□□□ 0.95
NDE1-203ENST00000570727 USP31Q70CQ4 1352 aa21■□□□□ 0.95
NDE1-203ENST00000570727 PTF1AQ7RTS3 328 aa21■□□□□ 0.95
NDE1-203ENST00000570727 MARCH10Q8NA82 808 aaPredicted RBP21■□□□□ 0.95
NDE1-203ENST00000570727 NME9Q86XW9 330 aa20.99■□□□□ 0.95
NDE1-203ENST00000570727 CDCA7Q9BWT1 371 aaPredicted RBP20.99■□□□□ 0.95
NDE1-203ENST00000570727 PLSCR1O15162 318 aa20.98■□□□□ 0.95
NDE1-203ENST00000570727 CSB-PGBD3P0DP91 1061 aa20.98■□□□□ 0.95
NDE1-203ENST00000570727 NBPF14Q5TI25 921 aa20.98■□□□□ 0.95
NDE1-203ENST00000570727 TMC1Q8TDI8 760 aa20.98■□□□□ 0.95
NDE1-203ENST00000570727 TONSLQ96HA7 1378 aa20.97■□□□□ 0.95
NDE1-203ENST00000570727 USP54Q70EL1 1684 aa20.96■□□□□ 0.95
NDE1-203ENST00000570727 PUS7Q96PZ0 661 aaKnown RBP20.96■□□□□ 0.95
NDE1-203ENST00000570727 BCL11BQ9C0K0 894 aaPredicted RBP20.96■□□□□ 0.95
NDE1-203ENST00000570727 HDGFL2Q7Z4V5 671 aaPredicted RBP20.95■□□□□ 0.94
NDE1-203ENST00000570727 BCL9O00512 1426 aa20.95■□□□□ 0.94
NDE1-203ENST00000570727 ABCC6O95255 1503 aa20.94■□□□□ 0.94
NDE1-203ENST00000570727 EXOC5O00471 708 aa20.94■□□□□ 0.94
NDE1-203ENST00000570727 PROM2Q8N271 834 aa20.93■□□□□ 0.94
NDE1-203ENST00000570727 TESK2Q96S53 571 aa20.93■□□□□ 0.94
NDE1-203ENST00000570727 CCDC7Q96M83 1385 aa20.93■□□□□ 0.94
NDE1-203ENST00000570727 RGPD3A6NKT7 1758 aaPredicted RBP20.92■□□□□ 0.94
NDE1-203ENST00000570727 RGPD4Q7Z3J3 1758 aa20.92■□□□□ 0.94
NDE1-203ENST00000570727 EDC4Q6P2E9 1401 aaKnown RBP20.92■□□□□ 0.94
NDE1-203ENST00000570727 ST20-MTHFSA0A0A6YYL1 179 aa20.91■□□□□ 0.94
NDE1-203ENST00000570727 A0A1W2PP64 1363 aa20.91■□□□□ 0.94
NDE1-203ENST00000570727 LTN1O94822 1766 aa20.91■□□□□ 0.94
NDE1-203ENST00000570727 TERF2IPQ9NYB0 399 aa20.91■□□□□ 0.94
NDE1-203ENST00000570727 ERBB3P21860 1342 aa20.9■□□□□ 0.94
NDE1-203ENST00000570727 ANO8Q9HCE9 1232 aaPredicted RBP20.88■□□□□ 0.93
NDE1-203ENST00000570727 NLRP2Q9NX02 1062 aa20.88■□□□□ 0.93
NDE1-203ENST00000570727 KCNQ2O43526 872 aa20.87■□□□□ 0.93
NDE1-203ENST00000570727 ANKRD24Q8TF21 1146 aa20.87■□□□□ 0.93
NDE1-203ENST00000570727 SPON1Q9HCB6 807 aa20.86■□□□□ 0.93
NDE1-203ENST00000570727 TNS2Q63HR2 1409 aa20.86■□□□□ 0.93
NDE1-203ENST00000570727 IL2RBP14784 551 aa20.84■□□□□ 0.93
NDE1-203ENST00000570727 TRIM26Q12899 539 aaPredicted RBP20.84■□□□□ 0.93
NDE1-203ENST00000570727 TXNRD1Q16881 649 aa20.84■□□□□ 0.93
NDE1-203ENST00000570727 IP6K1Q92551 441 aa20.84■□□□□ 0.93
NDE1-203ENST00000570727 PDGFDQ9GZP0 370 aaPredicted RBP20.83■□□□□ 0.93
NDE1-203ENST00000570727 NINLQ9Y2I6 1382 aa20.83■□□□□ 0.92
NDE1-203ENST00000570727 SLC24A1O60721 1099 aa20.82■□□□□ 0.92
NDE1-203ENST00000570727 KAT6BQ8WYB5 2073 aa20.81■□□□□ 0.92
NDE1-203ENST00000570727 FBLN1P23142 703 aa20.81■□□□□ 0.92
NDE1-203ENST00000570727 ACSBG1Q96GR2 724 aa20.81■□□□□ 0.92
NDE1-203ENST00000570727 CASZ1Q86V15 1759 aa20.8■□□□□ 0.92
NDE1-203ENST00000570727 NHSQ6T4R5 1651 aa20.8■□□□□ 0.92
NDE1-203ENST00000570727 COG3Q96JB2 828 aa20.79■□□□□ 0.92
NDE1-203ENST00000570727 LTV1Q96GA3 475 aaPredicted RBP20.78■□□□□ 0.92
NDE1-203ENST00000570727 MAP3K19Q56UN5 1328 aa20.78■□□□□ 0.92
NDE1-203ENST00000570727 SLC15A2Q16348 729 aa20.77■□□□□ 0.92
NDE1-203ENST00000570727 PPP1R1BQ9UD71 204 aaPredicted RBP20.77■□□□□ 0.92
NDE1-203ENST00000570727 ANKRD36BQ8N2N9 1353 aa20.76■□□□□ 0.91
NDE1-203ENST00000570727 HOXC9P31274 260 aa20.76■□□□□ 0.91
NDE1-203ENST00000570727 STK32BQ9NY57 414 aa20.76■□□□□ 0.91
NDE1-203ENST00000570727 BTAF1O14981 1849 aa20.74■□□□□ 0.91
NDE1-203ENST00000570727 FYB1O15117 783 aa20.74■□□□□ 0.91
NDE1-203ENST00000570727 ZBTB7AO95365 584 aa20.74■□□□□ 0.91
NDE1-203ENST00000570727 TMF1P82094 1093 aa20.74■□□□□ 0.91
NDE1-203ENST00000570727 RGPD2P0DJD1 1756 aa20.74■□□□□ 0.91
NDE1-203ENST00000570727 FAM208AQ9UK61 1670 aaKnown RBP20.73■□□□□ 0.91
NDE1-203ENST00000570727 USP47Q96K76 1375 aa20.73■□□□□ 0.91
NDE1-203ENST00000570727 AMPHP49418 695 aa20.73■□□□□ 0.91
NDE1-203ENST00000570727 DDX54Q8TDD1 881 aaKnown RBP20.73■□□□□ 0.91
NDE1-203ENST00000570727 PTGER2P43116 358 aa20.72■□□□□ 0.91
NDE1-203ENST00000570727 ATF5Q9Y2D1 282 aaPredicted RBP20.72■□□□□ 0.91
NDE1-203ENST00000570727 GGNBP2Q9H3C7 697 aa20.71■□□□□ 0.91
NDE1-203ENST00000570727 RRS1Q15050 365 aaKnown RBP20.7■□□□□ 0.9
NDE1-203ENST00000570727 LRRC4BQ9NT99 713 aa20.7■□□□□ 0.9
NDE1-203ENST00000570727 PAPPAQ13219 1627 aa20.68■□□□□ 0.9
NDE1-203ENST00000570727 NBPF6Q5VWK0 638 aa20.68■□□□□ 0.9
NDE1-203ENST00000570727 NBPF4Q96M43 638 aa20.68■□□□□ 0.9
NDE1-203ENST00000570727 SGIP1Q9BQI5 828 aa20.67■□□□□ 0.9
NDE1-203ENST00000570727 PRIM1P49642 420 aaKnown RBP20.66■□□□□ 0.9
NDE1-203ENST00000570727 ZNF827Q17R98 1081 aa20.66■□□□□ 0.9
NDE1-203ENST00000570727 ZCRB1Q8TBF4 217 aaKnown RBP20.66■□□□□ 0.9
NDE1-203ENST00000570727 CARD14Q9BXL6 1004 aa20.66■□□□□ 0.9
NDE1-203ENST00000570727 SHANK3Q9BYB0 1731 aa20.66■□□□□ 0.9
NDE1-203ENST00000570727 MYOM1P52179 1685 aa20.65■□□□□ 0.9
NDE1-203ENST00000570727 RTL1A6NKG5 1358 aa20.65■□□□□ 0.9
NDE1-203ENST00000570727 CDCA8Q53HL2 280 aa20.65■□□□□ 0.9
NDE1-203ENST00000570727 MTFR1LQ9H019 292 aa20.65■□□□□ 0.9
NDE1-203ENST00000570727 MEGF6O75095 1541 aa20.64■□□□□ 0.9
NDE1-203ENST00000570727 YY1P25490 414 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms