RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 MS4A1P11836 297 aa7□□□□□ -1.29
SF3B3-213ENST00000569687 ANKLE2Q86XL3 938 aa7□□□□□ -1.29
SF3B3-213ENST00000569687 FAM212AQ96EL1 285 aa7□□□□□ -1.29
SF3B3-213ENST00000569687 CRBNQ96SW2 442 aa7□□□□□ -1.29
SF3B3-213ENST00000569687 SGIP1Q9BQI5 828 aa7□□□□□ -1.29
SF3B3-213ENST00000569687 PTPRUQ92729 1446 aa7□□□□□ -1.29
SF3B3-213ENST00000569687 PIK3R4Q99570 1358 aa6.99□□□□□ -1.29
SF3B3-213ENST00000569687 TMPOP42166 694 aaKnown RBP6.99□□□□□ -1.29
SF3B3-213ENST00000569687 C20orf194Q5TEA3 1177 aa6.99□□□□□ -1.29
SF3B3-213ENST00000569687 LMOD2Q6P5Q4 547 aa6.99□□□□□ -1.29
SF3B3-213ENST00000569687 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.99□□□□□ -1.29
SF3B3-213ENST00000569687 HOMEZQ8IX15 550 aa6.99□□□□□ -1.29
SF3B3-213ENST00000569687 SLC26A8Q96RN1 970 aa6.99□□□□□ -1.29
SF3B3-213ENST00000569687 MYH16Q9H6N6 1097 aa6.99□□□□□ -1.29
SF3B3-213ENST00000569687 TRIM35Q9UPQ4 493 aa6.99□□□□□ -1.29
SF3B3-213ENST00000569687 PTCH1Q13635 1447 aa6.99□□□□□ -1.29
SF3B3-213ENST00000569687 PPIP5K1Q6PFW1 1433 aa6.99□□□□□ -1.29
SF3B3-213ENST00000569687 PRR36Q9H6K5 1346 aa6.99□□□□□ -1.29
SF3B3-213ENST00000569687 XRN1Q8IZH2 1706 aaKnown RBP6.98□□□□□ -1.29
SF3B3-213ENST00000569687 IL13P35225 146 aa6.98□□□□□ -1.29
SF3B3-213ENST00000569687 RARSP54136 660 aaKnown RBP6.98□□□□□ -1.29
SF3B3-213ENST00000569687 AMOTL2Q9Y2J4 779 aa6.98□□□□□ -1.29
SF3B3-213ENST00000569687 NPHP4O75161 1426 aaPredicted RBP6.98□□□□□ -1.29
SF3B3-213ENST00000569687 ANKRD26Q9UPS8 1709 aa6.98□□□□□ -1.29
SF3B3-213ENST00000569687 ADGRB2O60241 1585 aa6.97□□□□□ -1.29
SF3B3-213ENST00000569687 BCAR3O75815 825 aa6.97□□□□□ -1.29
SF3B3-213ENST00000569687 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.97□□□□□ -1.29
SF3B3-213ENST00000569687 KCNV2Q8TDN2 545 aa6.97□□□□□ -1.29
SF3B3-213ENST00000569687 COG3Q96JB2 828 aa6.97□□□□□ -1.29
SF3B3-213ENST00000569687 RSPH6AQ9H0K4 717 aa6.97□□□□□ -1.29
SF3B3-213ENST00000569687 RRP7AQ9Y3A4 280 aaKnown RBP6.97□□□□□ -1.29
SF3B3-213ENST00000569687 LMTK3Q96Q04 1460 aa6.97□□□□□ -1.29
SF3B3-213ENST00000569687 TTC21BQ7Z4L5 1316 aa6.97□□□□□ -1.29
SF3B3-213ENST00000569687 KDM2BQ8NHM5 1336 aa6.97□□□□□ -1.29
SF3B3-213ENST00000569687 SSH2Q76I76 1423 aa6.96□□□□□ -1.3
SF3B3-213ENST00000569687 U2SURPO15042 1029 aaKnown RBP6.96□□□□□ -1.3
SF3B3-213ENST00000569687 NEUROD2Q15784 382 aa6.96□□□□□ -1.3
SF3B3-213ENST00000569687 CENPQQ7L2Z9 268 aaPredicted RBP6.96□□□□□ -1.3
SF3B3-213ENST00000569687 NME9Q86XW9 330 aa6.96□□□□□ -1.3
SF3B3-213ENST00000569687 ACEP12821 1306 aa6.96□□□□□ -1.3
SF3B3-213ENST00000569687 NCKAP5LQ9HCH0 1330 aa6.96□□□□□ -1.3
SF3B3-213ENST00000569687 MAPK8IP3Q9UPT6 1336 aa6.96□□□□□ -1.3
SF3B3-213ENST00000569687 USP31Q70CQ4 1352 aa6.95□□□□□ -1.3
SF3B3-213ENST00000569687 MNX1P50219 401 aaPredicted RBP6.95□□□□□ -1.3
SF3B3-213ENST00000569687 BRPF1P55201 1214 aaPredicted RBP6.95□□□□□ -1.3
SF3B3-213ENST00000569687 RIPK4P57078 832 aa6.95□□□□□ -1.3
SF3B3-213ENST00000569687 CALD1Q05682 793 aaKnown RBP6.95□□□□□ -1.3
SF3B3-213ENST00000569687 CADPS2Q86UW7 1296 aa6.95□□□□□ -1.3
SF3B3-213ENST00000569687 RASEFQ8IZ41 740 aa6.95□□□□□ -1.3
SF3B3-213ENST00000569687 ZNF428Q96B54 188 aa6.95□□□□□ -1.3
SF3B3-213ENST00000569687 CREBZFQ9NS37 354 aa6.95□□□□□ -1.3
SF3B3-213ENST00000569687 WDR70Q9NW82 654 aa6.95□□□□□ -1.3
SF3B3-213ENST00000569687 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.95□□□□□ -1.3
SF3B3-213ENST00000569687 TTC21AQ8NDW8 1320 aa6.95□□□□□ -1.3
SF3B3-213ENST00000569687 NWD1Q149M9 1564 aa6.95□□□□□ -1.3
SF3B3-213ENST00000569687 NFE2L2Q16236 605 aa6.94□□□□□ -1.3
SF3B3-213ENST00000569687 ZRANB1Q9UGI0 708 aa6.94□□□□□ -1.3
SF3B3-213ENST00000569687 CHD2O14647 1828 aaKnown RBP6.94□□□□□ -1.3
SF3B3-213ENST00000569687 CDK12Q9NYV4 1490 aaPredicted RBP6.93□□□□□ -1.3
SF3B3-213ENST00000569687 KIF20BQ96Q89 1820 aa6.93□□□□□ -1.3
SF3B3-213ENST00000569687 NEFMP07197 916 aa6.93□□□□□ -1.3
SF3B3-213ENST00000569687 ZNF853P0CG23 659 aa6.93□□□□□ -1.3
SF3B3-213ENST00000569687 PYGBP11216 843 aa6.93□□□□□ -1.3
SF3B3-213ENST00000569687 KCNA6P17658 529 aa6.93□□□□□ -1.3
SF3B3-213ENST00000569687 FBLN1P23142 703 aa6.93□□□□□ -1.3
SF3B3-213ENST00000569687 PRKAR2BP31323 418 aa6.93□□□□□ -1.3
SF3B3-213ENST00000569687 ALDH1L2Q3SY69 923 aa6.93□□□□□ -1.3
SF3B3-213ENST00000569687 PHACTR3Q96KR7 559 aa6.93□□□□□ -1.3
SF3B3-213ENST00000569687 BACH2Q9BYV9 841 aa6.93□□□□□ -1.3
SF3B3-213ENST00000569687 EMILIN1Q9Y6C2 1016 aa6.93□□□□□ -1.3
SF3B3-213ENST00000569687 MON2Q7Z3U7 1717 aa6.93□□□□□ -1.3
SF3B3-213ENST00000569687 USP6P35125 1406 aa6.93□□□□□ -1.3
SF3B3-213ENST00000569687 ANKARQ7Z5J8 1434 aa6.93□□□□□ -1.3
SF3B3-213ENST00000569687 PDE4AP27815 886 aa6.92□□□□□ -1.3
SF3B3-213ENST00000569687 HSPA2P54652 639 aa6.92□□□□□ -1.3
SF3B3-213ENST00000569687 EXOSC9Q06265 439 aaKnown RBP6.92□□□□□ -1.3
SF3B3-213ENST00000569687 LMOD3Q0VAK6 560 aa6.92□□□□□ -1.3
SF3B3-213ENST00000569687 AKAP12Q02952 1782 aa6.92□□□□□ -1.3
SF3B3-213ENST00000569687 TOPAZ1Q8N9V7 1692 aa6.91□□□□□ -1.3
SF3B3-213ENST00000569687 PPM1GO15355 546 aaPredicted RBP6.91□□□□□ -1.3
SF3B3-213ENST00000569687 GNAI1P63096 354 aa6.91□□□□□ -1.3
SF3B3-213ENST00000569687 ZKSCAN2Q63HK3 967 aa6.91□□□□□ -1.3
SF3B3-213ENST00000569687 SPDYE1Q8NFV5 336 aaPredicted RBP6.91□□□□□ -1.3
SF3B3-213ENST00000569687 PANK1Q8TE04 598 aa6.91□□□□□ -1.3
SF3B3-213ENST00000569687 ARHGAP45Q92619 1136 aa6.91□□□□□ -1.3
SF3B3-213ENST00000569687 CLUAP1Q96AJ1 413 aa6.91□□□□□ -1.3
SF3B3-213ENST00000569687 IFT57Q9NWB7 429 aa6.91□□□□□ -1.3
SF3B3-213ENST00000569687 KIF24Q5T7B8 1368 aa6.91□□□□□ -1.3
SF3B3-213ENST00000569687 OVOS2A0A0J9YW53 1432 aa6.91□□□□□ -1.3
SF3B3-213ENST00000569687 OVOS2Q6IE36 1432 aa6.91□□□□□ -1.3
SF3B3-213ENST00000569687 NALCNQ8IZF0 1738 aa6.9□□□□□ -1.3
SF3B3-213ENST00000569687 STRCQ7RTU9 1775 aa6.9□□□□□ -1.3
SF3B3-213ENST00000569687 IPO8O15397 1037 aaKnown RBP6.9□□□□□ -1.3
SF3B3-213ENST00000569687 EIF4A2Q14240 407 aaKnown RBP6.9□□□□□ -1.3
SF3B3-213ENST00000569687 RRS1Q15050 365 aaKnown RBP6.9□□□□□ -1.3
SF3B3-213ENST00000569687 DZIP1LQ8IYY4 767 aaKnown RBP6.9□□□□□ -1.3
SF3B3-213ENST00000569687 NGDNQ8NEJ9 315 aaKnown RBP6.9□□□□□ -1.3
SF3B3-213ENST00000569687 PMFBP1Q8TBY8 1022 aa6.9□□□□□ -1.3
SF3B3-213ENST00000569687 SSH1Q8WYL5 1049 aa6.9□□□□□ -1.3
SF3B3-213ENST00000569687 ADGRL3Q9HAR2 1447 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms