RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 EZH2Q15910 746 aaKnown RBP19.73■□□□□ 0.75
GTF3C1-211ENST00000569653 FAM196AQ6ZSG2 479 aa19.73■□□□□ 0.75
GTF3C1-211ENST00000569653 ZNF692Q9BU19 519 aaPredicted RBP19.73■□□□□ 0.75
GTF3C1-211ENST00000569653 CAMKK2Q96RR4 588 aa19.72■□□□□ 0.75
GTF3C1-211ENST00000569653 THRAP3Q9Y2W1 955 aaKnown RBP19.72■□□□□ 0.75
GTF3C1-211ENST00000569653 NME9Q86XW9 330 aa19.71■□□□□ 0.75
GTF3C1-211ENST00000569653 TESK2Q96S53 571 aa19.71■□□□□ 0.75
GTF3C1-211ENST00000569653 SLC12A5Q9H2X9 1139 aa19.71■□□□□ 0.75
GTF3C1-211ENST00000569653 USP31Q70CQ4 1352 aa19.7■□□□□ 0.74
GTF3C1-211ENST00000569653 TRIM26Q12899 539 aaPredicted RBP19.7■□□□□ 0.74
GTF3C1-211ENST00000569653 WDR17Q8IZU2 1322 aa19.7■□□□□ 0.74
GTF3C1-211ENST00000569653 PDE3BQ13370 1112 aa19.69■□□□□ 0.74
GTF3C1-211ENST00000569653 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.69■□□□□ 0.74
GTF3C1-211ENST00000569653 A0A1W2PP64 1363 aa19.69■□□□□ 0.74
GTF3C1-211ENST00000569653 ABCC6O95255 1503 aa19.68■□□□□ 0.74
GTF3C1-211ENST00000569653 TOM1L2Q6ZVM7 507 aa19.67■□□□□ 0.74
GTF3C1-211ENST00000569653 PTF1AQ7RTS3 328 aa19.67■□□□□ 0.74
GTF3C1-211ENST00000569653 APBA3O96018 575 aa19.66■□□□□ 0.74
GTF3C1-211ENST00000569653 R3HDM1Q15032 1099 aaKnown RBP19.66■□□□□ 0.74
GTF3C1-211ENST00000569653 KCNH5Q8NCM2 988 aa19.66■□□□□ 0.74
GTF3C1-211ENST00000569653 TMC1Q8TDI8 760 aa19.66■□□□□ 0.74
GTF3C1-211ENST00000569653 OVOS2A0A0J9YW53 1432 aa19.66■□□□□ 0.74
GTF3C1-211ENST00000569653 OVOS2Q6IE36 1432 aa19.66■□□□□ 0.74
GTF3C1-211ENST00000569653 EDC4Q6P2E9 1401 aaKnown RBP19.66■□□□□ 0.74
GTF3C1-211ENST00000569653 ST20-MTHFSA0A0A6YYL1 179 aa19.65■□□□□ 0.74
GTF3C1-211ENST00000569653 OVOS2A0A0G2JMS6 1433 aa19.64■□□□□ 0.73
GTF3C1-211ENST00000569653 RGPD3A6NKT7 1758 aaPredicted RBP19.64■□□□□ 0.73
GTF3C1-211ENST00000569653 RGPD4Q7Z3J3 1758 aa19.64■□□□□ 0.73
GTF3C1-211ENST00000569653 MARCH10Q8NA82 808 aaPredicted RBP19.63■□□□□ 0.73
GTF3C1-211ENST00000569653 PARD3Q8TEW0 1356 aa19.62■□□□□ 0.73
GTF3C1-211ENST00000569653 CARD10Q9BWT7 1032 aa19.62■□□□□ 0.73
GTF3C1-211ENST00000569653 DDB1Q16531 1140 aa19.61■□□□□ 0.73
GTF3C1-211ENST00000569653 PUS7Q96PZ0 661 aaKnown RBP19.6■□□□□ 0.73
GTF3C1-211ENST00000569653 HDGFL2Q7Z4V5 671 aaPredicted RBP19.59■□□□□ 0.73
GTF3C1-211ENST00000569653 BCL9O00512 1426 aa19.59■□□□□ 0.73
GTF3C1-211ENST00000569653 ERBB3P21860 1342 aa19.58■□□□□ 0.73
GTF3C1-211ENST00000569653 RGPD2P0DJD1 1756 aa19.58■□□□□ 0.73
GTF3C1-211ENST00000569653 CSB-PGBD3P0DP91 1061 aa19.58■□□□□ 0.72
GTF3C1-211ENST00000569653 TNS2Q63HR2 1409 aa19.58■□□□□ 0.72
GTF3C1-211ENST00000569653 USP47Q96K76 1375 aa19.57■□□□□ 0.72
GTF3C1-211ENST00000569653 TERF2IPQ9NYB0 399 aa19.56■□□□□ 0.72
GTF3C1-211ENST00000569653 CCDC7Q96M83 1385 aa19.56■□□□□ 0.72
GTF3C1-211ENST00000569653 MYOM1P52179 1685 aa19.56■□□□□ 0.72
GTF3C1-211ENST00000569653 FBLN1P23142 703 aa19.55■□□□□ 0.72
GTF3C1-211ENST00000569653 NHSQ6T4R5 1651 aa19.55■□□□□ 0.72
GTF3C1-211ENST00000569653 NINLQ9Y2I6 1382 aa19.55■□□□□ 0.72
GTF3C1-211ENST00000569653 CDCA7Q9BWT1 371 aaPredicted RBP19.54■□□□□ 0.72
GTF3C1-211ENST00000569653 FAM208AQ9UK61 1670 aaKnown RBP19.54■□□□□ 0.72
GTF3C1-211ENST00000569653 CASZ1Q86V15 1759 aa19.53■□□□□ 0.72
GTF3C1-211ENST00000569653 PROM2Q8N271 834 aa19.53■□□□□ 0.72
GTF3C1-211ENST00000569653 ANKRD24Q8TF21 1146 aa19.53■□□□□ 0.72
GTF3C1-211ENST00000569653 BCL11BQ9C0K0 894 aaPredicted RBP19.52■□□□□ 0.72
GTF3C1-211ENST00000569653 ANO8Q9HCE9 1232 aaPredicted RBP19.52■□□□□ 0.72
GTF3C1-211ENST00000569653 ANKRD36BQ8N2N9 1353 aa19.52■□□□□ 0.72
GTF3C1-211ENST00000569653 SHANK3Q9BYB0 1731 aa19.51■□□□□ 0.71
GTF3C1-211ENST00000569653 KIF20BQ96Q89 1820 aa19.51■□□□□ 0.71
GTF3C1-211ENST00000569653 NLRP2Q9NX02 1062 aa19.51■□□□□ 0.71
GTF3C1-211ENST00000569653 PLSCR1O15162 318 aa19.5■□□□□ 0.71
GTF3C1-211ENST00000569653 BTAF1O14981 1849 aa19.5■□□□□ 0.71
GTF3C1-211ENST00000569653 MAP3K19Q56UN5 1328 aa19.5■□□□□ 0.71
GTF3C1-211ENST00000569653 C11orf95C9JLR9 678 aaPredicted RBP19.49■□□□□ 0.71
GTF3C1-211ENST00000569653 KCNQ2O43526 872 aa19.49■□□□□ 0.71
GTF3C1-211ENST00000569653 IP6K1Q92551 441 aa19.49■□□□□ 0.71
GTF3C1-211ENST00000569653 EXOC5O00471 708 aa19.48■□□□□ 0.71
GTF3C1-211ENST00000569653 KAT6BQ8WYB5 2073 aa19.48■□□□□ 0.71
GTF3C1-211ENST00000569653 PDGFDQ9GZP0 370 aaPredicted RBP19.47■□□□□ 0.71
GTF3C1-211ENST00000569653 IL2RBP14784 551 aa19.46■□□□□ 0.71
GTF3C1-211ENST00000569653 LTV1Q96GA3 475 aaPredicted RBP19.46■□□□□ 0.71
GTF3C1-211ENST00000569653 PAPPAQ13219 1627 aa19.46■□□□□ 0.71
GTF3C1-211ENST00000569653 FYB1O15117 783 aa19.45■□□□□ 0.7
GTF3C1-211ENST00000569653 HOXC9P31274 260 aa19.45■□□□□ 0.7
GTF3C1-211ENST00000569653 TMF1P82094 1093 aa19.45■□□□□ 0.7
GTF3C1-211ENST00000569653 COG3Q96JB2 828 aa19.45■□□□□ 0.7
GTF3C1-211ENST00000569653 GGNBP2Q9H3C7 697 aa19.45■□□□□ 0.7
GTF3C1-211ENST00000569653 NBPF14Q5TI25 921 aa19.44■□□□□ 0.7
GTF3C1-211ENST00000569653 ACSBG1Q96GR2 724 aa19.44■□□□□ 0.7
GTF3C1-211ENST00000569653 MEGF6O75095 1541 aa19.43■□□□□ 0.7
GTF3C1-211ENST00000569653 CARD14Q9BXL6 1004 aa19.43■□□□□ 0.7
GTF3C1-211ENST00000569653 DOT1LQ8TEK3 1739 aa19.42■□□□□ 0.7
GTF3C1-211ENST00000569653 RRS1Q15050 365 aaKnown RBP19.42■□□□□ 0.7
GTF3C1-211ENST00000569653 TXNRD1Q16881 649 aa19.42■□□□□ 0.7
GTF3C1-211ENST00000569653 PCGF6Q9BYE7 350 aa19.42■□□□□ 0.7
GTF3C1-211ENST00000569653 SLC24A1O60721 1099 aa19.4■□□□□ 0.7
GTF3C1-211ENST00000569653 RTL1A6NKG5 1358 aa19.39■□□□□ 0.69
GTF3C1-211ENST00000569653 ANKRD26Q9UPS8 1709 aa19.39■□□□□ 0.69
GTF3C1-211ENST00000569653 NSD3Q9BZ95 1437 aa19.38■□□□□ 0.69
GTF3C1-211ENST00000569653 CLSPNQ9HAW4 1339 aa19.37■□□□□ 0.69
GTF3C1-211ENST00000569653 AMPHP49418 695 aa19.37■□□□□ 0.69
GTF3C1-211ENST00000569653 NBPF6Q5VWK0 638 aa19.37■□□□□ 0.69
GTF3C1-211ENST00000569653 NBPF4Q96M43 638 aa19.37■□□□□ 0.69
GTF3C1-211ENST00000569653 TIMELESSQ9UNS1 1208 aa19.37■□□□□ 0.69
GTF3C1-211ENST00000569653 TUBGCP6Q96RT7 1819 aa19.37■□□□□ 0.69
GTF3C1-211ENST00000569653 NSD2O96028 1365 aa19.36■□□□□ 0.69
GTF3C1-211ENST00000569653 USHBP1Q8N6Y0 703 aa19.36■□□□□ 0.69
GTF3C1-211ENST00000569653 LY75O60449 1722 aa19.35■□□□□ 0.69
GTF3C1-211ENST00000569653 DDX54Q8TDD1 881 aaKnown RBP19.35■□□□□ 0.69
GTF3C1-211ENST00000569653 SPON1Q9HCB6 807 aa19.35■□□□□ 0.69
GTF3C1-211ENST00000569653 HSP90AB2PQ58FF8 381 aa19.34■□□□□ 0.69
GTF3C1-211ENST00000569653 LRRC4BQ9NT99 713 aa19.34■□□□□ 0.69
GTF3C1-211ENST00000569653 MAP2P11137 1827 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms