RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 AXIN2Q9Y2T1 843 aa28.26■■■□□ 2.11
ABCA3-206ENST00000569062 BARGINQ6ZT62 677 aa28.24■■■□□ 2.11
ABCA3-206ENST00000569062 TCP11L2Q8N4U5 519 aa28.24■■■□□ 2.11
ABCA3-206ENST00000569062 CRB1P82279 1406 aa28.23■■■□□ 2.11
ABCA3-206ENST00000569062 LTN1O94822 1766 aa28.22■■■□□ 2.11
ABCA3-206ENST00000569062 THRAP3Q9Y2W1 955 aaKnown RBP28.2■■■□□ 2.1
ABCA3-206ENST00000569062 ANKRD36BQ8N2N9 1353 aa28.19■■■□□ 2.1
ABCA3-206ENST00000569062 OVOS2A0A0J9YW53 1432 aa28.18■■■□□ 2.1
ABCA3-206ENST00000569062 OVOS2Q6IE36 1432 aa28.18■■■□□ 2.1
ABCA3-206ENST00000569062 PARP4Q9UKK3 1724 aaKnown RBP28.18■■■□□ 2.1
ABCA3-206ENST00000569062 DEFB132Q7Z7B7 95 aa28.18■■■□□ 2.1
ABCA3-206ENST00000569062 WDR17Q8IZU2 1322 aa28.18■■■□□ 2.1
ABCA3-206ENST00000569062 SF3B2Q13435 895 aaKnown RBP28.17■■■□□ 2.1
ABCA3-206ENST00000569062 TOM1L2Q6ZVM7 507 aa28.17■■■□□ 2.1
ABCA3-206ENST00000569062 MYOM1P52179 1685 aa28.16■■■□□ 2.1
ABCA3-206ENST00000569062 WNK3Q9BYP7 1800 aa28.16■■■□□ 2.1
ABCA3-206ENST00000569062 ABCC6O95255 1503 aa28.16■■■□□ 2.1
ABCA3-206ENST00000569062 RGPD1P0DJD0 1748 aa28.15■■■□□ 2.1
ABCA3-206ENST00000569062 CDCA8Q53HL2 280 aa28.15■■■□□ 2.1
ABCA3-206ENST00000569062 PDE3BQ13370 1112 aa28.13■■■□□ 2.09
ABCA3-206ENST00000569062 TNS1Q9HBL0 1735 aaKnown RBP28.12■■■□□ 2.09
ABCA3-206ENST00000569062 LRRC37A3O60309 1634 aa28.11■■■□□ 2.09
ABCA3-206ENST00000569062 CSB-PGBD3P0DP91 1061 aa28.11■■■□□ 2.09
ABCA3-206ENST00000569062 FAM196AQ6ZSG2 479 aa28.09■■■□□ 2.09
ABCA3-206ENST00000569062 COG3Q96JB2 828 aa28.09■■■□□ 2.09
ABCA3-206ENST00000569062 KIF20BQ96Q89 1820 aa28.07■■■□□ 2.08
ABCA3-206ENST00000569062 CARD10Q9BWT7 1032 aa28.07■■■□□ 2.08
ABCA3-206ENST00000569062 BAG6P46379 1132 aa28.06■■■□□ 2.08
ABCA3-206ENST00000569062 FYB1O15117 783 aa28.05■■■□□ 2.08
ABCA3-206ENST00000569062 TRIM37O94972 964 aa28.05■■■□□ 2.08
ABCA3-206ENST00000569062 HSPA5P11021 654 aaKnown RBP28.05■■■□□ 2.08
ABCA3-206ENST00000569062 ERBB3P21860 1342 aa28.05■■■□□ 2.08
ABCA3-206ENST00000569062 FBLN1P23142 703 aa28.05■■■□□ 2.08
ABCA3-206ENST00000569062 EIF4G2P78344 907 aaKnown RBP eCLIP28.05■■■□□ 2.08
ABCA3-206ENST00000569062 GGNBP2Q9H3C7 697 aa28.04■■■□□ 2.08
ABCA3-206ENST00000569062 DDB1Q16531 1140 aa28.03■■■□□ 2.08
ABCA3-206ENST00000569062 PEAK1Q9H792 1746 aa28.03■■■□□ 2.08
ABCA3-206ENST00000569062 DISP2A7MBM2 1401 aa28.02■■■□□ 2.08
ABCA3-206ENST00000569062 EN1Q05925 392 aaPredicted RBP28.02■■■□□ 2.08
ABCA3-206ENST00000569062 ANKRD24Q8TF21 1146 aa28.02■■■□□ 2.08
ABCA3-206ENST00000569062 CARD14Q9BXL6 1004 aa28.02■■■□□ 2.08
ABCA3-206ENST00000569062 CCDC7Q96M83 1385 aa28.01■■■□□ 2.07
ABCA3-206ENST00000569062 IP6K1Q92551 441 aa28■■■□□ 2.07
ABCA3-206ENST00000569062 POLR3GLQ9BT43 218 aa28■■■□□ 2.07
ABCA3-206ENST00000569062 CDCA7Q9BWT1 371 aaPredicted RBP28■■■□□ 2.07
ABCA3-206ENST00000569062 MAP3K19Q56UN5 1328 aa27.99■■■□□ 2.07
ABCA3-206ENST00000569062 NLRP2Q9NX02 1062 aa27.99■■■□□ 2.07
ABCA3-206ENST00000569062 NSD3Q9BZ95 1437 aa27.99■■■□□ 2.07
ABCA3-206ENST00000569062 SBF2Q86WG5 1849 aa27.98■■■□□ 2.07
ABCA3-206ENST00000569062 OVOS2A0A0G2JMS6 1433 aa27.97■■■□□ 2.07
ABCA3-206ENST00000569062 FAM208AQ9UK61 1670 aaKnown RBP27.95■■■□□ 2.07
ABCA3-206ENST00000569062 APBA3O96018 575 aa27.95■■■□□ 2.06
ABCA3-206ENST00000569062 HOXC9P31274 260 aa27.95■■■□□ 2.06
ABCA3-206ENST00000569062 RRS1Q15050 365 aaKnown RBP27.95■■■□□ 2.06
ABCA3-206ENST00000569062 LTV1Q96GA3 475 aaPredicted RBP27.95■■■□□ 2.06
ABCA3-206ENST00000569062 RGPD2P0DJD1 1756 aa27.94■■■□□ 2.06
ABCA3-206ENST00000569062 AMPHP49418 695 aa27.94■■■□□ 2.06
ABCA3-206ENST00000569062 EZH2Q15910 746 aaKnown RBP27.94■■■□□ 2.06
ABCA3-206ENST00000569062 MARCH10Q8NA82 808 aaPredicted RBP27.94■■■□□ 2.06
ABCA3-206ENST00000569062 EXOC5O00471 708 aa27.92■■■□□ 2.06
ABCA3-206ENST00000569062 C11orf95C9JLR9 678 aaPredicted RBP27.91■■■□□ 2.06
ABCA3-206ENST00000569062 CAMKK2Q96RR4 588 aa27.91■■■□□ 2.06
ABCA3-206ENST00000569062 TNS2Q63HR2 1409 aa27.9■■■□□ 2.06
ABCA3-206ENST00000569062 IL2RBP14784 551 aa27.89■■■□□ 2.06
ABCA3-206ENST00000569062 RTL1A6NKG5 1358 aa27.88■■■□□ 2.05
ABCA3-206ENST00000569062 RREB1Q92766 1687 aa27.87■■■□□ 2.05
ABCA3-206ENST00000569062 SRCAPQ6ZRS2 3230 aa27.86■■■□□ 2.05
ABCA3-206ENST00000569062 BCL9O00512 1426 aa27.85■■■□□ 2.05
ABCA3-206ENST00000569062 PTF1AQ7RTS3 328 aa27.85■■■□□ 2.05
ABCA3-206ENST00000569062 CGNL1Q0VF96 1302 aa27.84■■■□□ 2.05
ABCA3-206ENST00000569062 NUP188Q5SRE5 1749 aa27.84■■■□□ 2.05
ABCA3-206ENST00000569062 ANKRD26Q9UPS8 1709 aa27.84■■■□□ 2.05
ABCA3-206ENST00000569062 PSDA5PKW4 1024 aaPredicted RBP27.83■■■□□ 2.05
ABCA3-206ENST00000569062 PARD3Q8TEW0 1356 aa27.83■■■□□ 2.05
ABCA3-206ENST00000569062 PANK3Q9H999 370 aa27.82■■■□□ 2.04
ABCA3-206ENST00000569062 MAP2P11137 1827 aaKnown RBP27.82■■■□□ 2.04
ABCA3-206ENST00000569062 HSP90AB2PQ58FF8 381 aa27.81■■■□□ 2.04
ABCA3-206ENST00000569062 BCL11BQ9C0K0 894 aaPredicted RBP27.81■■■□□ 2.04
ABCA3-206ENST00000569062 EMILIN1Q9Y6C2 1016 aa27.8■■■□□ 2.04
ABCA3-206ENST00000569062 FLT4P35916 1363 aa27.8■■■□□ 2.04
ABCA3-206ENST00000569062 RGPD3A6NKT7 1758 aaPredicted RBP27.79■■■□□ 2.04
ABCA3-206ENST00000569062 RGPD4Q7Z3J3 1758 aa27.79■■■□□ 2.04
ABCA3-206ENST00000569062 INSRP06213 1382 aa27.79■■■□□ 2.04
ABCA3-206ENST00000569062 NBPF6Q5VWK0 638 aa27.79■■■□□ 2.04
ABCA3-206ENST00000569062 NBPF4Q96M43 638 aa27.79■■■□□ 2.04
ABCA3-206ENST00000569062 KIF24Q5T7B8 1368 aa27.78■■■□□ 2.04
ABCA3-206ENST00000569062 NHSQ6T4R5 1651 aa27.78■■■□□ 2.04
ABCA3-206ENST00000569062 SMG6Q86US8 1419 aaKnown RBP27.77■■■□□ 2.04
ABCA3-206ENST00000569062 SHANK3Q9BYB0 1731 aa27.76■■■□□ 2.03
ABCA3-206ENST00000569062 R3HDM1Q15032 1099 aaKnown RBP27.76■■■□□ 2.03
ABCA3-206ENST00000569062 USHBP1Q8N6Y0 703 aa27.76■■■□□ 2.03
ABCA3-206ENST00000569062 PLSCR1O15162 318 aa27.75■■■□□ 2.03
ABCA3-206ENST00000569062 KCNQ2O43526 872 aa27.75■■■□□ 2.03
ABCA3-206ENST00000569062 ACSBG1Q96GR2 724 aa27.75■■■□□ 2.03
ABCA3-206ENST00000569062 MEGF6O75095 1541 aa27.75■■■□□ 2.03
ABCA3-206ENST00000569062 PPM1GO15355 546 aaPredicted RBP27.74■■■□□ 2.03
ABCA3-206ENST00000569062 KAT6BQ8WYB5 2073 aa27.72■■■□□ 2.03
ABCA3-206ENST00000569062 KIF7Q2M1P5 1343 aa27.72■■■□□ 2.03
ABCA3-206ENST00000569062 DDX54Q8TDD1 881 aaKnown RBP27.72■■■□□ 2.03
ABCA3-206ENST00000569062 TNNT2P45379 298 aaPredicted RBP27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms