RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 GCP02774 474 aa16.63■□□□□ 0.25
GGA2-213ENST00000568922 SOS2Q07890 1332 aaPredicted RBP16.63■□□□□ 0.25
GGA2-213ENST00000568922 ZNF521Q96K83 1311 aa16.63■□□□□ 0.25
GGA2-213ENST00000568922 MAPK8IP3Q9UPT6 1336 aa16.63■□□□□ 0.25
GGA2-213ENST00000568922 MED1Q15648 1581 aaPredicted RBP16.62■□□□□ 0.25
GGA2-213ENST00000568922 HOXC9P31274 260 aa16.62■□□□□ 0.25
GGA2-213ENST00000568922 RSPH6AQ9H0K4 717 aa16.62■□□□□ 0.25
GGA2-213ENST00000568922 NEFMP07197 916 aa16.61■□□□□ 0.25
GGA2-213ENST00000568922 CRYBG1Q9Y4K1 1723 aa16.61■□□□□ 0.25
GGA2-213ENST00000568922 CCDC27Q2M243 656 aa16.6■□□□□ 0.25
GGA2-213ENST00000568922 IP6K1Q92551 441 aa16.6■□□□□ 0.25
GGA2-213ENST00000568922 PRKAR2BP31323 418 aa16.59■□□□□ 0.25
GGA2-213ENST00000568922 ROBO1Q9Y6N7 1651 aa16.59■□□□□ 0.25
GGA2-213ENST00000568922 HMOX1P09601 288 aa16.59■□□□□ 0.25
GGA2-213ENST00000568922 GOLGA2Q08379 1002 aa16.59■□□□□ 0.25
GGA2-213ENST00000568922 ARHGEF25Q86VW2 580 aa16.59■□□□□ 0.25
GGA2-213ENST00000568922 WWC1Q8IX03 1113 aa16.57■□□□□ 0.24
GGA2-213ENST00000568922 PHF23Q9BUL5 403 aaPredicted RBP16.57■□□□□ 0.24
GGA2-213ENST00000568922 TMPOP42166 694 aaKnown RBP16.56■□□□□ 0.24
GGA2-213ENST00000568922 CDCA7LQ96GN5 454 aa16.56■□□□□ 0.24
GGA2-213ENST00000568922 RRP7AQ9Y3A4 280 aaKnown RBP16.56■□□□□ 0.24
GGA2-213ENST00000568922 IGSF1Q8N6C5 1336 aa16.56■□□□□ 0.24
GGA2-213ENST00000568922 NEUROD2Q15784 382 aa16.56■□□□□ 0.24
GGA2-213ENST00000568922 SULT6B1Q6IMI4 303 aa16.56■□□□□ 0.24
GGA2-213ENST00000568922 GTF3C3Q9Y5Q9 886 aa16.56■□□□□ 0.24
GGA2-213ENST00000568922 AHDC1Q5TGY3 1603 aaPredicted RBP16.55■□□□□ 0.24
GGA2-213ENST00000568922 ABCC6O95255 1503 aa16.55■□□□□ 0.24
GGA2-213ENST00000568922 KDRP35968 1356 aa16.55■□□□□ 0.24
GGA2-213ENST00000568922 WDR63Q8IWG1 891 aa16.54■□□□□ 0.24
GGA2-213ENST00000568922 E9PSI1 815 aa16.54■□□□□ 0.24
GGA2-213ENST00000568922 PLEKHG5O94827 1062 aa16.54■□□□□ 0.24
GGA2-213ENST00000568922 SLFN5Q08AF3 891 aa16.54■□□□□ 0.24
GGA2-213ENST00000568922 EYA1Q99502 592 aa16.54■□□□□ 0.24
GGA2-213ENST00000568922 ZBTB7CA1YPR0 619 aa16.53■□□□□ 0.24
GGA2-213ENST00000568922 ABCA3Q99758 1704 aa16.53■□□□□ 0.24
GGA2-213ENST00000568922 RIPK4P57078 832 aa16.52■□□□□ 0.24
GGA2-213ENST00000568922 NFE2L2Q16236 605 aa16.52■□□□□ 0.24
GGA2-213ENST00000568922 AEBP1Q8IUX7 1158 aa16.52■□□□□ 0.24
GGA2-213ENST00000568922 PHACTR3Q96KR7 559 aa16.52■□□□□ 0.24
GGA2-213ENST00000568922 RGPD5Q99666 1765 aa16.52■□□□□ 0.24
GGA2-213ENST00000568922 DLG5Q8TDM6 1919 aa16.52■□□□□ 0.24
GGA2-213ENST00000568922 TRMT2AQ8IZ69 625 aaKnown RBP16.52■□□□□ 0.23
GGA2-213ENST00000568922 SUPT16HQ9Y5B9 1047 aaKnown RBP16.52■□□□□ 0.23
GGA2-213ENST00000568922 COL18A1P39060 1754 aa16.52■□□□□ 0.23
GGA2-213ENST00000568922 CPDO75976 1380 aa16.51■□□□□ 0.23
GGA2-213ENST00000568922 TOM1O60784 492 aa16.51■□□□□ 0.23
GGA2-213ENST00000568922 ZC3H6P61129 1189 aaKnown RBP16.51■□□□□ 0.23
GGA2-213ENST00000568922 DUSP27Q5VZP5 1158 aa16.51■□□□□ 0.23
GGA2-213ENST00000568922 CABLES1Q8TDN4 633 aa16.51■□□□□ 0.23
GGA2-213ENST00000568922 LTV1Q96GA3 475 aaPredicted RBP16.51■□□□□ 0.23
GGA2-213ENST00000568922 TRIM35Q9UPQ4 493 aa16.5■□□□□ 0.23
GGA2-213ENST00000568922 RGPD2P0DJD1 1756 aa16.5■□□□□ 0.23
GGA2-213ENST00000568922 CAMTA1Q9Y6Y1 1673 aa16.49■□□□□ 0.23
GGA2-213ENST00000568922 LMOD3Q0VAK6 560 aa16.49■□□□□ 0.23
GGA2-213ENST00000568922 LRRC59Q96AG4 307 aaKnown RBP16.49■□□□□ 0.23
GGA2-213ENST00000568922 FAM208AQ9UK61 1670 aaKnown RBP16.49■□□□□ 0.23
GGA2-213ENST00000568922 NEFLP07196 543 aa16.48■□□□□ 0.23
GGA2-213ENST00000568922 PHLPP1O60346 1717 aa16.48■□□□□ 0.23
GGA2-213ENST00000568922 IL16Q14005 1332 aa16.48■□□□□ 0.23
GGA2-213ENST00000568922 ANKRD24Q8TF21 1146 aa16.47■□□□□ 0.23
GGA2-213ENST00000568922 SPINK5Q9NQ38 1064 aaPredicted RBP16.47■□□□□ 0.23
GGA2-213ENST00000568922 COL22A1Q8NFW1 1626 aaPredicted RBP16.47■□□□□ 0.23
GGA2-213ENST00000568922 KIAA0232Q92628 1395 aa16.47■□□□□ 0.23
GGA2-213ENST00000568922 AXIN2Q9Y2T1 843 aa16.47■□□□□ 0.23
GGA2-213ENST00000568922 NCAPD2Q15021 1401 aa16.46■□□□□ 0.23
GGA2-213ENST00000568922 HAP1P54257 671 aaPredicted RBP16.46■□□□□ 0.23
GGA2-213ENST00000568922 RCAN3Q9UKA8 241 aa16.46■□□□□ 0.23
GGA2-213ENST00000568922 LMO7Q8WWI1 1683 aa16.45■□□□□ 0.22
GGA2-213ENST00000568922 CALD1Q05682 793 aaKnown RBP16.45■□□□□ 0.22
GGA2-213ENST00000568922 NBPF6Q5VWK0 638 aa16.45■□□□□ 0.22
GGA2-213ENST00000568922 NBPF4Q96M43 638 aa16.45■□□□□ 0.22
GGA2-213ENST00000568922 MYH16Q9H6N6 1097 aa16.45■□□□□ 0.22
GGA2-213ENST00000568922 ERBB3P21860 1342 aa16.45■□□□□ 0.22
GGA2-213ENST00000568922 COL16A1Q07092 1604 aaPredicted RBP16.44■□□□□ 0.22
GGA2-213ENST00000568922 GAS2L2Q8NHY3 880 aa16.44■□□□□ 0.22
GGA2-213ENST00000568922 RNF123Q5XPI4 1314 aa16.44■□□□□ 0.22
GGA2-213ENST00000568922 CHRNA2Q15822 529 aa16.42■□□□□ 0.22
GGA2-213ENST00000568922 PRDM11Q9NQV5 511 aa16.42■□□□□ 0.22
GGA2-213ENST00000568922 UBAP1LF5GYI3 381 aa16.42■□□□□ 0.22
GGA2-213ENST00000568922 MTHFSDQ2M296 383 aaKnown RBP16.42■□□□□ 0.22
GGA2-213ENST00000568922 USHBP1Q8N6Y0 703 aa16.42■□□□□ 0.22
GGA2-213ENST00000568922 PIP4K2BP78356 416 aa16.41■□□□□ 0.22
GGA2-213ENST00000568922 FKBP8Q14318 412 aa16.4■□□□□ 0.22
GGA2-213ENST00000568922 HTATSF1O43719 755 aaKnown RBP16.39■□□□□ 0.21
GGA2-213ENST00000568922 CERKQ8TCT0 537 aa16.39■□□□□ 0.21
GGA2-213ENST00000568922 FANCIQ9NVI1 1328 aa16.38■□□□□ 0.21
GGA2-213ENST00000568922 CSB-PGBD3P0DP91 1061 aa16.38■□□□□ 0.21
GGA2-213ENST00000568922 IFT57Q9NWB7 429 aa16.38■□□□□ 0.21
GGA2-213ENST00000568922 COL14A1Q05707 1796 aaKnown RBP16.38■□□□□ 0.21
GGA2-213ENST00000568922 PLEKHG2Q9H7P9 1386 aa16.38■□□□□ 0.21
GGA2-213ENST00000568922 GNAI1P63096 354 aa16.38■□□□□ 0.21
GGA2-213ENST00000568922 RTF1Q92541 710 aaKnown RBP16.38■□□□□ 0.21
GGA2-213ENST00000568922 NLRP2Q9NX02 1062 aa16.38■□□□□ 0.21
GGA2-213ENST00000568922 COL5A2P05997 1499 aaPredicted RBP16.37■□□□□ 0.21
GGA2-213ENST00000568922 FAM83GA6ND36 823 aa16.37■□□□□ 0.21
GGA2-213ENST00000568922 AMOTQ4VCS5 1084 aa16.37■□□□□ 0.21
GGA2-213ENST00000568922 THUMPD2Q9BTF0 503 aaKnown RBP16.37■□□□□ 0.21
GGA2-213ENST00000568922 GNAT3A8MTJ3 354 aa16.36■□□□□ 0.21
GGA2-213ENST00000568922 CT47B1P0C2W7 299 aaPredicted RBP16.36■□□□□ 0.21
GGA2-213ENST00000568922 RRP1P56182 461 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms