RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 CABP1Q9NZU7 370 aa17.1■□□□□ 0.33
GTF3C1-209ENST00000568569 WDR17Q8IZU2 1322 aa17.1■□□□□ 0.33
GTF3C1-209ENST00000568569 PTF1AQ7RTS3 328 aa17.09■□□□□ 0.33
GTF3C1-209ENST00000568569 ZBTB7AO95365 584 aa17.08■□□□□ 0.32
GTF3C1-209ENST00000568569 PROM2Q8N271 834 aa17.08■□□□□ 0.32
GTF3C1-209ENST00000568569 MARCH10Q8NA82 808 aaPredicted RBP17.08■□□□□ 0.32
GTF3C1-209ENST00000568569 CPSF1Q10570 1443 aaKnown RBP17.07■□□□□ 0.32
GTF3C1-209ENST00000568569 PDGFDQ9GZP0 370 aaPredicted RBP17.07■□□□□ 0.32
GTF3C1-209ENST00000568569 AXIN2Q9Y2T1 843 aa17.07■□□□□ 0.32
GTF3C1-209ENST00000568569 PTGER2P43116 358 aa17.06■□□□□ 0.32
GTF3C1-209ENST00000568569 ARHGEF25Q86VW2 580 aa17.06■□□□□ 0.32
GTF3C1-209ENST00000568569 CASZ1Q86V15 1759 aa17.06■□□□□ 0.32
GTF3C1-209ENST00000568569 CSB-PGBD3P0DP91 1061 aa17.05■□□□□ 0.32
GTF3C1-209ENST00000568569 TXNRD1Q16881 649 aa17.05■□□□□ 0.32
GTF3C1-209ENST00000568569 KCNH5Q8NCM2 988 aa17.05■□□□□ 0.32
GTF3C1-209ENST00000568569 CARD10Q9BWT7 1032 aa17.05■□□□□ 0.32
GTF3C1-209ENST00000568569 STK32BQ9NY57 414 aa17.05■□□□□ 0.32
GTF3C1-209ENST00000568569 SBF2Q86WG5 1849 aa17.04■□□□□ 0.32
GTF3C1-209ENST00000568569 EVC2Q86UK5 1308 aa17.03■□□□□ 0.32
GTF3C1-209ENST00000568569 SLC15A2Q16348 729 aa17.03■□□□□ 0.32
GTF3C1-209ENST00000568569 ATF5Q9Y2D1 282 aaPredicted RBP17.03■□□□□ 0.32
GTF3C1-209ENST00000568569 PIK3C2AO00443 1686 aa17.03■□□□□ 0.32
GTF3C1-209ENST00000568569 COL18A1P39060 1754 aa17.02■□□□□ 0.32
GTF3C1-209ENST00000568569 QRICH2Q9H0J4 1663 aa17.02■□□□□ 0.32
GTF3C1-209ENST00000568569 EXOC5O00471 708 aa17.02■□□□□ 0.32
GTF3C1-209ENST00000568569 ZNF692Q9BU19 519 aaPredicted RBP17.02■□□□□ 0.32
GTF3C1-209ENST00000568569 CCDC7Q96M83 1385 aa17.02■□□□□ 0.31
GTF3C1-209ENST00000568569 TTC21BQ7Z4L5 1316 aa17.01■□□□□ 0.31
GTF3C1-209ENST00000568569 SOX12O15370 315 aa17.01■□□□□ 0.31
GTF3C1-209ENST00000568569 ZNF784Q8NCA9 323 aaPredicted RBP17.01■□□□□ 0.31
GTF3C1-209ENST00000568569 MTFR1LQ9H019 292 aa17.01■□□□□ 0.31
GTF3C1-209ENST00000568569 MYOM1P52179 1685 aa17.01■□□□□ 0.31
GTF3C1-209ENST00000568569 TTC21AQ8NDW8 1320 aa17■□□□□ 0.31
GTF3C1-209ENST00000568569 TNS2Q63HR2 1409 aa17■□□□□ 0.31
GTF3C1-209ENST00000568569 SYT17Q9BSW7 474 aa17■□□□□ 0.31
GTF3C1-209ENST00000568569 FHDC1Q9C0D6 1143 aaPredicted RBP17■□□□□ 0.31
GTF3C1-209ENST00000568569 WNK3Q9BYP7 1800 aa16.99■□□□□ 0.31
GTF3C1-209ENST00000568569 AKAP12Q02952 1782 aa16.98■□□□□ 0.31
GTF3C1-209ENST00000568569 SGIP1Q9BQI5 828 aa16.97■□□□□ 0.31
GTF3C1-209ENST00000568569 NFAT5O94916 1531 aa16.96■□□□□ 0.31
GTF3C1-209ENST00000568569 ABCC6O95255 1503 aa16.96■□□□□ 0.31
GTF3C1-209ENST00000568569 TRPM1Q7Z4N2 1603 aa16.96■□□□□ 0.3
GTF3C1-209ENST00000568569 GOLGB1Q14789 3259 aaKnown RBP16.95■□□□□ 0.3
GTF3C1-209ENST00000568569 KTN1Q86UP2 1357 aaKnown RBP16.94■□□□□ 0.3
GTF3C1-209ENST00000568569 ARXQ96QS3 562 aa16.94■□□□□ 0.3
GTF3C1-209ENST00000568569 ERBB3P21860 1342 aa16.94■□□□□ 0.3
GTF3C1-209ENST00000568569 MAP3K5Q99683 1374 aa16.93■□□□□ 0.3
GTF3C1-209ENST00000568569 L3MBTL2Q969R5 705 aa16.93■□□□□ 0.3
GTF3C1-209ENST00000568569 ACSBG1Q96GR2 724 aa16.93■□□□□ 0.3
GTF3C1-209ENST00000568569 ROCK2O75116 1388 aaKnown RBP16.92■□□□□ 0.3
GTF3C1-209ENST00000568569 NHSQ6T4R5 1651 aa16.92■□□□□ 0.3
GTF3C1-209ENST00000568569 NLRP2Q9NX02 1062 aa16.92■□□□□ 0.3
GTF3C1-209ENST00000568569 IL2RBP14784 551 aa16.91■□□□□ 0.3
GTF3C1-209ENST00000568569 USP31Q70CQ4 1352 aa16.9■□□□□ 0.3
GTF3C1-209ENST00000568569 RGPD5Q99666 1765 aa16.89■□□□□ 0.3
GTF3C1-209ENST00000568569 PAPPAQ13219 1627 aa16.89■□□□□ 0.29
GTF3C1-209ENST00000568569 SENP3-EIF4A1A0A087X0R7 540 aa16.89■□□□□ 0.29
GTF3C1-209ENST00000568569 ZNF827Q17R98 1081 aa16.89■□□□□ 0.29
GTF3C1-209ENST00000568569 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.89■□□□□ 0.29
GTF3C1-209ENST00000568569 C1QTNF8P60827 252 aa16.88■□□□□ 0.29
GTF3C1-209ENST00000568569 LRRC4BQ9NT99 713 aa16.87■□□□□ 0.29
GTF3C1-209ENST00000568569 GPR162Q16538 588 aa16.86■□□□□ 0.29
GTF3C1-209ENST00000568569 NME9Q86XW9 330 aa16.86■□□□□ 0.29
GTF3C1-209ENST00000568569 ANKRD24Q8TF21 1146 aa16.86■□□□□ 0.29
GTF3C1-209ENST00000568569 SLC16A10Q8TF71 515 aa16.86■□□□□ 0.29
GTF3C1-209ENST00000568569 SLC27A3Q5K4L6 730 aa16.85■□□□□ 0.29
GTF3C1-209ENST00000568569 SBNO2Q9Y2G9 1366 aa16.85■□□□□ 0.29
GTF3C1-209ENST00000568569 POLD1P28340 1107 aa16.84■□□□□ 0.29
GTF3C1-209ENST00000568569 AKT1S1Q96B36 256 aa16.84■□□□□ 0.29
GTF3C1-209ENST00000568569 MON2Q7Z3U7 1717 aa16.84■□□□□ 0.29
GTF3C1-209ENST00000568569 CHD4Q14839 1912 aa16.83■□□□□ 0.28
GTF3C1-209ENST00000568569 BTAF1O14981 1849 aa16.82■□□□□ 0.28
GTF3C1-209ENST00000568569 CD163L1Q9NR16 1453 aa16.82■□□□□ 0.28
GTF3C1-209ENST00000568569 HDGFL2Q7Z4V5 671 aaPredicted RBP16.82■□□□□ 0.28
GTF3C1-209ENST00000568569 KLHL34Q8N239 644 aa16.82■□□□□ 0.28
GTF3C1-209ENST00000568569 USP54Q70EL1 1684 aa16.81■□□□□ 0.28
GTF3C1-209ENST00000568569 EDC4Q6P2E9 1401 aaKnown RBP16.81■□□□□ 0.28
GTF3C1-209ENST00000568569 PNPLA7Q6ZV29 1317 aa16.81■□□□□ 0.28
GTF3C1-209ENST00000568569 TMC1Q8TDI8 760 aa16.81■□□□□ 0.28
GTF3C1-209ENST00000568569 SIN3AQ96ST3 1273 aa16.81■□□□□ 0.28
GTF3C1-209ENST00000568569 CEP350Q5VT06 3117 aa16.81■□□□□ 0.28
GTF3C1-209ENST00000568569 GIGYF1O75420 1035 aaPredicted RBP16.8■□□□□ 0.28
GTF3C1-209ENST00000568569 DDX54Q8TDD1 881 aaKnown RBP16.8■□□□□ 0.28
GTF3C1-209ENST00000568569 TFCP2L1Q9NZI6 479 aa16.8■□□□□ 0.28
GTF3C1-209ENST00000568569 PELP1Q8IZL8 1130 aaKnown RBP16.79■□□□□ 0.28
GTF3C1-209ENST00000568569 NEUROD1Q13562 356 aa16.78■□□□□ 0.28
GTF3C1-209ENST00000568569 IP6K1Q92551 441 aa16.78■□□□□ 0.28
GTF3C1-209ENST00000568569 SYTL4Q96C24 671 aaPredicted RBP16.78■□□□□ 0.28
GTF3C1-209ENST00000568569 SLC12A5Q9H2X9 1139 aa16.78■□□□□ 0.28
GTF3C1-209ENST00000568569 TERF2IPQ9NYB0 399 aa16.78■□□□□ 0.28
GTF3C1-209ENST00000568569 ANKRD36BQ8N2N9 1353 aa16.77■□□□□ 0.28
GTF3C1-209ENST00000568569 LTN1O94822 1766 aa16.77■□□□□ 0.28
GTF3C1-209ENST00000568569 A0A1W2PP64 1363 aa16.77■□□□□ 0.27
GTF3C1-209ENST00000568569 PRIM1P49642 420 aaKnown RBP16.76■□□□□ 0.27
GTF3C1-209ENST00000568569 NLGN2Q8NFZ4 835 aa16.76■□□□□ 0.27
GTF3C1-209ENST00000568569 LTV1Q96GA3 475 aaPredicted RBP16.76■□□□□ 0.27
GTF3C1-209ENST00000568569 CARD11Q9BXL7 1154 aa16.76■□□□□ 0.27
GTF3C1-209ENST00000568569 KAT6BQ8WYB5 2073 aa16.75■□□□□ 0.27
GTF3C1-209ENST00000568569 KCNQ4P56696 695 aa16.75■□□□□ 0.27
GTF3C1-209ENST00000568569 QSER1Q2KHR3 1735 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms