RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.76■■□□□ 1.87
SPSB3-210ENST00000568416 EZH2Q15910 746 aaKnown RBP26.75■■□□□ 1.87
SPSB3-210ENST00000568416 HDGFL2Q7Z4V5 671 aaPredicted RBP26.75■■□□□ 1.87
SPSB3-210ENST00000568416 CAMKK2Q96RR4 588 aa26.75■■□□□ 1.87
SPSB3-210ENST00000568416 TESK2Q96S53 571 aa26.75■■□□□ 1.87
SPSB3-210ENST00000568416 USP54Q70EL1 1684 aa26.73■■□□□ 1.87
SPSB3-210ENST00000568416 APBA3O96018 575 aa26.73■■□□□ 1.87
SPSB3-210ENST00000568416 NME9Q86XW9 330 aa26.73■■□□□ 1.87
SPSB3-210ENST00000568416 ABCC6O95255 1503 aa26.72■■□□□ 1.87
SPSB3-210ENST00000568416 ST20-MTHFSA0A0A6YYL1 179 aa26.72■■□□□ 1.87
SPSB3-210ENST00000568416 PSDA5PKW4 1024 aaPredicted RBP26.72■■□□□ 1.87
SPSB3-210ENST00000568416 EDC4Q6P2E9 1401 aaKnown RBP26.72■■□□□ 1.87
SPSB3-210ENST00000568416 TERF2IPQ9NYB0 399 aa26.71■■□□□ 1.87
SPSB3-210ENST00000568416 A0A1W2PP64 1363 aa26.71■■□□□ 1.87
SPSB3-210ENST00000568416 PARD3Q8TEW0 1356 aa26.71■■□□□ 1.87
SPSB3-210ENST00000568416 LRRC37A3O60309 1634 aa26.7■■□□□ 1.86
SPSB3-210ENST00000568416 C11orf95C9JLR9 678 aaPredicted RBP26.69■■□□□ 1.86
SPSB3-210ENST00000568416 CARD10Q9BWT7 1032 aa26.69■■□□□ 1.86
SPSB3-210ENST00000568416 OVOS2A0A0G2JMS6 1433 aa26.68■■□□□ 1.86
SPSB3-210ENST00000568416 OVOS2A0A0J9YW53 1432 aa26.68■■□□□ 1.86
SPSB3-210ENST00000568416 OVOS2Q6IE36 1432 aa26.68■■□□□ 1.86
SPSB3-210ENST00000568416 DDB1Q16531 1140 aa26.68■■□□□ 1.86
SPSB3-210ENST00000568416 CDCA7Q9BWT1 371 aaPredicted RBP26.68■■□□□ 1.86
SPSB3-210ENST00000568416 PEAK1Q9H792 1746 aa26.68■■□□□ 1.86
SPSB3-210ENST00000568416 SLC24A1O60721 1099 aa26.67■■□□□ 1.86
SPSB3-210ENST00000568416 CSB-PGBD3P0DP91 1061 aa26.67■■□□□ 1.86
SPSB3-210ENST00000568416 NINLQ9Y2I6 1382 aa26.67■■□□□ 1.86
SPSB3-210ENST00000568416 RGPD5Q99666 1765 aa26.66■■□□□ 1.86
SPSB3-210ENST00000568416 LRP5O75197 1615 aa26.65■■□□□ 1.86
SPSB3-210ENST00000568416 WNK3Q9BYP7 1800 aa26.65■■□□□ 1.86
SPSB3-210ENST00000568416 R3HDM1Q15032 1099 aaKnown RBP26.65■■□□□ 1.86
SPSB3-210ENST00000568416 CCDC7Q96M83 1385 aa26.63■■□□□ 1.85
SPSB3-210ENST00000568416 RREB1Q92766 1687 aa26.62■■□□□ 1.85
SPSB3-210ENST00000568416 MARCH10Q8NA82 808 aaPredicted RBP26.61■■□□□ 1.85
SPSB3-210ENST00000568416 ERBB3P21860 1342 aa26.61■■□□□ 1.85
SPSB3-210ENST00000568416 USP47Q96K76 1375 aa26.6■■□□□ 1.85
SPSB3-210ENST00000568416 BCL9O00512 1426 aa26.6■■□□□ 1.85
SPSB3-210ENST00000568416 SRCAPQ6ZRS2 3230 aa26.59■■□□□ 1.85
SPSB3-210ENST00000568416 NUP188Q5SRE5 1749 aa26.57■■□□□ 1.84
SPSB3-210ENST00000568416 EXOC5O00471 708 aa26.56■■□□□ 1.84
SPSB3-210ENST00000568416 TMF1P82094 1093 aa26.56■■□□□ 1.84
SPSB3-210ENST00000568416 ANKRD36BQ8N2N9 1353 aa26.56■■□□□ 1.84
SPSB3-210ENST00000568416 LTN1O94822 1766 aa26.56■■□□□ 1.84
SPSB3-210ENST00000568416 ANKRD24Q8TF21 1146 aa26.55■■□□□ 1.84
SPSB3-210ENST00000568416 BCL11BQ9C0K0 894 aaPredicted RBP26.55■■□□□ 1.84
SPSB3-210ENST00000568416 PLSCR1O15162 318 aa26.54■■□□□ 1.84
SPSB3-210ENST00000568416 PTF1AQ7RTS3 328 aa26.54■■□□□ 1.84
SPSB3-210ENST00000568416 NLRP2Q9NX02 1062 aa26.54■■□□□ 1.84
SPSB3-210ENST00000568416 TIMELESSQ9UNS1 1208 aa26.54■■□□□ 1.84
SPSB3-210ENST00000568416 TNS2Q63HR2 1409 aa26.54■■□□□ 1.84
SPSB3-210ENST00000568416 SBF2Q86WG5 1849 aa26.53■■□□□ 1.84
SPSB3-210ENST00000568416 NBPF14Q5TI25 921 aa26.52■■□□□ 1.84
SPSB3-210ENST00000568416 IP6K1Q92551 441 aa26.52■■□□□ 1.84
SPSB3-210ENST00000568416 COG3Q96JB2 828 aa26.52■■□□□ 1.84
SPSB3-210ENST00000568416 CLSPNQ9HAW4 1339 aa26.52■■□□□ 1.84
SPSB3-210ENST00000568416 RGPD3A6NKT7 1758 aaPredicted RBP26.51■■□□□ 1.83
SPSB3-210ENST00000568416 RGPD4Q7Z3J3 1758 aa26.51■■□□□ 1.83
SPSB3-210ENST00000568416 IL2RBP14784 551 aa26.49■■□□□ 1.83
SPSB3-210ENST00000568416 MAP3K19Q56UN5 1328 aa26.47■■□□□ 1.83
SPSB3-210ENST00000568416 CDCA8Q53HL2 280 aa26.46■■□□□ 1.83
SPSB3-210ENST00000568416 PCGF6Q9BYE7 350 aa26.46■■□□□ 1.83
SPSB3-210ENST00000568416 FYB1O15117 783 aa26.44■■□□□ 1.82
SPSB3-210ENST00000568416 FBLN1P23142 703 aa26.44■■□□□ 1.82
SPSB3-210ENST00000568416 HOXC9P31274 260 aa26.44■■□□□ 1.82
SPSB3-210ENST00000568416 PROM2Q8N271 834 aa26.44■■□□□ 1.82
SPSB3-210ENST00000568416 LTV1Q96GA3 475 aaPredicted RBP26.42■■□□□ 1.82
SPSB3-210ENST00000568416 GGNBP2Q9H3C7 697 aa26.42■■□□□ 1.82
SPSB3-210ENST00000568416 KCNQ2O43526 872 aa26.41■■□□□ 1.82
SPSB3-210ENST00000568416 AMPHP49418 695 aa26.41■■□□□ 1.82
SPSB3-210ENST00000568416 FAM208AQ9UK61 1670 aaKnown RBP26.41■■□□□ 1.82
SPSB3-210ENST00000568416 ANO8Q9HCE9 1232 aaPredicted RBP26.4■■□□□ 1.82
SPSB3-210ENST00000568416 NHSQ6T4R5 1651 aa26.39■■□□□ 1.82
SPSB3-210ENST00000568416 RTL1A6NKG5 1358 aa26.39■■□□□ 1.82
SPSB3-210ENST00000568416 ACSBG1Q96GR2 724 aa26.38■■□□□ 1.81
SPSB3-210ENST00000568416 TXNRD1Q16881 649 aa26.37■■□□□ 1.81
SPSB3-210ENST00000568416 RRS1Q15050 365 aaKnown RBP26.36■■□□□ 1.81
SPSB3-210ENST00000568416 CARD14Q9BXL6 1004 aa26.36■■□□□ 1.81
SPSB3-210ENST00000568416 MYOM1P52179 1685 aa26.35■■□□□ 1.81
SPSB3-210ENST00000568416 SPON1Q9HCB6 807 aa26.32■■□□□ 1.8
SPSB3-210ENST00000568416 NSD3Q9BZ95 1437 aa26.31■■□□□ 1.8
SPSB3-210ENST00000568416 KIF20BQ96Q89 1820 aa26.3■■□□□ 1.8
SPSB3-210ENST00000568416 DDX54Q8TDD1 881 aaKnown RBP26.3■■□□□ 1.8
SPSB3-210ENST00000568416 CASZ1Q86V15 1759 aa26.29■■□□□ 1.8
SPSB3-210ENST00000568416 NBPF6Q5VWK0 638 aa26.29■■□□□ 1.8
SPSB3-210ENST00000568416 NBPF4Q96M43 638 aa26.29■■□□□ 1.8
SPSB3-210ENST00000568416 MEGF6O75095 1541 aa26.29■■□□□ 1.8
SPSB3-210ENST00000568416 SLC15A2Q16348 729 aa26.28■■□□□ 1.8
SPSB3-210ENST00000568416 STK32BQ9NY57 414 aa26.28■■□□□ 1.8
SPSB3-210ENST00000568416 INSRP06213 1382 aa26.28■■□□□ 1.8
SPSB3-210ENST00000568416 KIF24Q5T7B8 1368 aa26.28■■□□□ 1.8
SPSB3-210ENST00000568416 PDGFDQ9GZP0 370 aaPredicted RBP26.27■■□□□ 1.8
SPSB3-210ENST00000568416 SMG6Q86US8 1419 aaKnown RBP26.26■■□□□ 1.79
SPSB3-210ENST00000568416 FLT4P35916 1363 aa26.26■■□□□ 1.79
SPSB3-210ENST00000568416 HSP90AB2PQ58FF8 381 aa26.26■■□□□ 1.79
SPSB3-210ENST00000568416 ZCRB1Q8TBF4 217 aaKnown RBP26.26■■□□□ 1.79
SPSB3-210ENST00000568416 RGPD2P0DJD1 1756 aa26.25■■□□□ 1.79
SPSB3-210ENST00000568416 BTAF1O14981 1849 aa26.25■■□□□ 1.79
SPSB3-210ENST00000568416 USHBP1Q8N6Y0 703 aa26.24■■□□□ 1.79
SPSB3-210ENST00000568416 CCER1Q8TC90 406 aaPredicted RBP26.23■■□□□ 1.79
SPSB3-210ENST00000568416 PAPPAQ13219 1627 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms