RNA–Protein interactions for RNA: ENST00000568346.1

KLHDC4-221, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 343 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-221ENST00000568346 TRIM35Q9UPQ4 493 aa11.06□□□□□ -0.64
KLHDC4-221ENST00000568346 EP400Q96L91 3159 aa11.05□□□□□ -0.64
KLHDC4-221ENST00000568346 PTPRUQ92729 1446 aa11.05□□□□□ -0.64
KLHDC4-221ENST00000568346 CLUAP1Q96AJ1 413 aa11.05□□□□□ -0.64
KLHDC4-221ENST00000568346 POLKQ9UBT6 870 aa11.05□□□□□ -0.64
KLHDC4-221ENST00000568346 CCDC61Q9Y6R9 512 aa11.05□□□□□ -0.64
KLHDC4-221ENST00000568346 PIK3C2AO00443 1686 aa11.04□□□□□ -0.64
KLHDC4-221ENST00000568346 NPHP4O75161 1426 aaPredicted RBP11.04□□□□□ -0.64
KLHDC4-221ENST00000568346 USP6P35125 1406 aa11.04□□□□□ -0.64
KLHDC4-221ENST00000568346 SSH2Q76I76 1423 aa11.04□□□□□ -0.64
KLHDC4-221ENST00000568346 U2SURPO15042 1029 aaKnown RBP11.04□□□□□ -0.64
KLHDC4-221ENST00000568346 NUDT16Q96DE0 195 aaKnown RBP11.04□□□□□ -0.64
KLHDC4-221ENST00000568346 ZNF692Q9BU19 519 aaPredicted RBP11.04□□□□□ -0.64
KLHDC4-221ENST00000568346 RSPH6AQ9H0K4 717 aa11.04□□□□□ -0.64
KLHDC4-221ENST00000568346 NHSL1Q5SYE7 1610 aa11.04□□□□□ -0.64
KLHDC4-221ENST00000568346 CACNA1FO60840 1977 aa11.04□□□□□ -0.64
KLHDC4-221ENST00000568346 PRR36Q9H6K5 1346 aa11.04□□□□□ -0.64
KLHDC4-221ENST00000568346 CANXP27824 592 aaKnown RBP11.03□□□□□ -0.64
KLHDC4-221ENST00000568346 NEUROD2Q15784 382 aa11.03□□□□□ -0.64
KLHDC4-221ENST00000568346 ZNF784Q8NCA9 323 aaPredicted RBP11.03□□□□□ -0.64
KLHDC4-221ENST00000568346 ZNF428Q96B54 188 aa11.03□□□□□ -0.64
KLHDC4-221ENST00000568346 AFF2P51816 1311 aa11.03□□□□□ -0.64
KLHDC4-221ENST00000568346 N4BP2Q86UW6 1770 aaPredicted RBP11.03□□□□□ -0.64
KLHDC4-221ENST00000568346 USP31Q70CQ4 1352 aa11.03□□□□□ -0.64
KLHDC4-221ENST00000568346 PIK3R4Q99570 1358 aa11.03□□□□□ -0.64
KLHDC4-221ENST00000568346 ANKARQ7Z5J8 1434 aa11.02□□□□□ -0.64
KLHDC4-221ENST00000568346 BRPF1P55201 1214 aaPredicted RBP11.02□□□□□ -0.65
KLHDC4-221ENST00000568346 FAM161AQ3B820 660 aa11.02□□□□□ -0.65
KLHDC4-221ENST00000568346 TXNDC2Q86VQ3 553 aa11.02□□□□□ -0.65
KLHDC4-221ENST00000568346 PMFBP1Q8TBY8 1022 aa11.02□□□□□ -0.65
KLHDC4-221ENST00000568346 LRRC37A3O60309 1634 aa11.02□□□□□ -0.65
KLHDC4-221ENST00000568346 PLEKHG3A1L390 1219 aa11.01□□□□□ -0.65
KLHDC4-221ENST00000568346 CAPN15O75808 1086 aa11.01□□□□□ -0.65
KLHDC4-221ENST00000568346 IL13P35225 146 aa11.01□□□□□ -0.65
KLHDC4-221ENST00000568346 ZKSCAN2Q63HK3 967 aa11.01□□□□□ -0.65
KLHDC4-221ENST00000568346 PANK1Q8TE04 598 aa11.01□□□□□ -0.65
KLHDC4-221ENST00000568346 COG6Q9Y2V7 657 aa11.01□□□□□ -0.65
KLHDC4-221ENST00000568346 COL16A1Q07092 1604 aaPredicted RBP11□□□□□ -0.65
KLHDC4-221ENST00000568346 NEFMP07197 916 aa11□□□□□ -0.65
KLHDC4-221ENST00000568346 RBM6P78332 1123 aaKnown RBP11□□□□□ -0.65
KLHDC4-221ENST00000568346 CALD1Q05682 793 aaKnown RBP11□□□□□ -0.65
KLHDC4-221ENST00000568346 MVPQ14764 893 aaKnown RBP11□□□□□ -0.65
KLHDC4-221ENST00000568346 NFE2L2Q16236 605 aa11□□□□□ -0.65
KLHDC4-221ENST00000568346 ALDH1L2Q3SY69 923 aa11□□□□□ -0.65
KLHDC4-221ENST00000568346 C8orf34Q49A92 452 aa11□□□□□ -0.65
KLHDC4-221ENST00000568346 ANKLE2Q86XL3 938 aa11□□□□□ -0.65
KLHDC4-221ENST00000568346 DDRGK1Q96HY6 314 aa11□□□□□ -0.65
KLHDC4-221ENST00000568346 TBX22Q9Y458 520 aa11□□□□□ -0.65
KLHDC4-221ENST00000568346 KIF16BQ96L93 1317 aa11□□□□□ -0.65
KLHDC4-221ENST00000568346 PHRF1Q9P1Y6 1649 aaKnown RBP10.99□□□□□ -0.65
KLHDC4-221ENST00000568346 LTKP29376 864 aa10.99□□□□□ -0.65
KLHDC4-221ENST00000568346 RIPK4P57078 832 aa10.99□□□□□ -0.65
KLHDC4-221ENST00000568346 EXOSC9Q06265 439 aaKnown RBP10.99□□□□□ -0.65
KLHDC4-221ENST00000568346 DEFB132Q7Z7B7 95 aa10.99□□□□□ -0.65
KLHDC4-221ENST00000568346 NME9Q86XW9 330 aa10.99□□□□□ -0.65
KLHDC4-221ENST00000568346 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.99□□□□□ -0.65
KLHDC4-221ENST00000568346 COG3Q96JB2 828 aa10.99□□□□□ -0.65
KLHDC4-221ENST00000568346 ZBTB47Q9UFB7 747 aaPredicted RBP10.99□□□□□ -0.65
KLHDC4-221ENST00000568346 SPATA31A6Q5VVP1 1343 aa10.99□□□□□ -0.65
KLHDC4-221ENST00000568346 LTN1O94822 1766 aa10.98□□□□□ -0.65
KLHDC4-221ENST00000568346 IGHDP01880 384 aa10.98□□□□□ -0.65
KLHDC4-221ENST00000568346 RLBP1P12271 317 aa10.98□□□□□ -0.65
KLHDC4-221ENST00000568346 PRKAR2BP31323 418 aa10.98□□□□□ -0.65
KLHDC4-221ENST00000568346 LMOD3Q0VAK6 560 aa10.98□□□□□ -0.65
KLHDC4-221ENST00000568346 QTRT2Q9H974 415 aaKnown RBP10.98□□□□□ -0.65
KLHDC4-221ENST00000568346 EID1Q9Y6B2 187 aa10.98□□□□□ -0.65
KLHDC4-221ENST00000568346 TTC21BQ7Z4L5 1316 aa10.98□□□□□ -0.65
KLHDC4-221ENST00000568346 TTC21AQ8NDW8 1320 aa10.98□□□□□ -0.65
KLHDC4-221ENST00000568346 PAK3O75914 559 aaPredicted RBP10.97□□□□□ -0.65
KLHDC4-221ENST00000568346 DZIP1LQ8IYY4 767 aaKnown RBP10.97□□□□□ -0.65
KLHDC4-221ENST00000568346 FRAT1Q92837 279 aaPredicted RBP10.97□□□□□ -0.65
KLHDC4-221ENST00000568346 TSR2Q969E8 191 aaKnown RBP10.97□□□□□ -0.65
KLHDC4-221ENST00000568346 EMILIN1Q9Y6C2 1016 aa10.97□□□□□ -0.65
KLHDC4-221ENST00000568346 FAM208AQ9UK61 1670 aaKnown RBP10.96□□□□□ -0.65
KLHDC4-221ENST00000568346 ZNF853P0CG23 659 aa10.96□□□□□ -0.65
KLHDC4-221ENST00000568346 SKAP1Q86WV1 359 aa10.96□□□□□ -0.65
KLHDC4-221ENST00000568346 SSH1Q8WYL5 1049 aa10.96□□□□□ -0.65
KLHDC4-221ENST00000568346 SMC4Q9NTJ3 1288 aa10.96□□□□□ -0.65
KLHDC4-221ENST00000568346 IFT57Q9NWB7 429 aa10.96□□□□□ -0.65
KLHDC4-221ENST00000568346 DDX19BQ9UMR2 479 aa10.96□□□□□ -0.65
KLHDC4-221ENST00000568346 BCL9LQ86UU0 1499 aa10.95□□□□□ -0.66
KLHDC4-221ENST00000568346 ARHGEF10O15013 1369 aa10.95□□□□□ -0.66
KLHDC4-221ENST00000568346 KIF24Q5T7B8 1368 aa10.95□□□□□ -0.66
KLHDC4-221ENST00000568346 TRIM27P14373 513 aa10.95□□□□□ -0.66
KLHDC4-221ENST00000568346 ATF7IPQ6VMQ6 1270 aa10.95□□□□□ -0.66
KLHDC4-221ENST00000568346 RWDD1Q9H446 243 aaPredicted RBP10.95□□□□□ -0.66
KLHDC4-221ENST00000568346 PCDH10Q9P2E7 1040 aa10.95□□□□□ -0.66
KLHDC4-221ENST00000568346 TNNQ9UQP3 1299 aa10.95□□□□□ -0.66
KLHDC4-221ENST00000568346 PCDHB15Q9Y5E8 787 aa10.95□□□□□ -0.66
KLHDC4-221ENST00000568346 NWD1Q149M9 1564 aa10.94□□□□□ -0.66
KLHDC4-221ENST00000568346 ACEP12821 1306 aa10.94□□□□□ -0.66
KLHDC4-221ENST00000568346 IPO8O15397 1037 aaKnown RBP10.94□□□□□ -0.66
KLHDC4-221ENST00000568346 GNAI1P63096 354 aa10.94□□□□□ -0.66
KLHDC4-221ENST00000568346 HDAC1Q13547 482 aaPredicted RBP10.94□□□□□ -0.66
KLHDC4-221ENST00000568346 FTSJ3Q8IY81 847 aaKnown RBP10.94□□□□□ -0.66
KLHDC4-221ENST00000568346 THEMISQ8N1K5 641 aaPredicted RBP10.94□□□□□ -0.66
KLHDC4-221ENST00000568346 BCL2L13Q9BXK5 485 aa10.94□□□□□ -0.66
KLHDC4-221ENST00000568346 RGS3P49796 1198 aa10.93□□□□□ -0.66
KLHDC4-221ENST00000568346 ARHGAP45Q92619 1136 aa10.93□□□□□ -0.66
KLHDC4-221ENST00000568346 SBNO1A3KN83 1393 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms