RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 USP54Q70EL1 1684 aa30.06■■■□□ 2.4
LINC00543-201ENST00000567234 RARSP54136 660 aaKnown RBP30.06■■■□□ 2.4
LINC00543-201ENST00000567234 PIK3C2AO00443 1686 aa30.04■■■□□ 2.4
LINC00543-201ENST00000567234 NFE2L2Q16236 605 aa30.03■■■□□ 2.4
LINC00543-201ENST00000567234 C19orf44Q9H6X5 657 aa30.03■■■□□ 2.4
LINC00543-201ENST00000567234 PEAK1Q9H792 1746 aa30.01■■■□□ 2.39
LINC00543-201ENST00000567234 HMOX1P09601 288 aa30.01■■■□□ 2.39
LINC00543-201ENST00000567234 NCOA3Q9Y6Q9 1424 aa29.99■■■□□ 2.39
LINC00543-201ENST00000567234 CALD1Q05682 793 aaKnown RBP29.99■■■□□ 2.39
LINC00543-201ENST00000567234 RGPD1P0DJD0 1748 aa29.98■■■□□ 2.39
LINC00543-201ENST00000567234 EIF4A2Q14240 407 aaKnown RBP29.97■■■□□ 2.39
LINC00543-201ENST00000567234 PHACTR3Q96KR7 559 aa29.97■■■□□ 2.39
LINC00543-201ENST00000567234 DLG5Q8TDM6 1919 aa29.97■■■□□ 2.39
LINC00543-201ENST00000567234 ESCO1Q5FWF5 840 aa29.96■■■□□ 2.39
LINC00543-201ENST00000567234 ORAI2Q96SN7 254 aa29.96■■■□□ 2.39
LINC00543-201ENST00000567234 ANP32AP39687 249 aaKnown RBP29.95■■■□□ 2.39
LINC00543-201ENST00000567234 LMOD3Q0VAK6 560 aa29.95■■■□□ 2.39
LINC00543-201ENST00000567234 SBNO1A3KN83 1393 aa29.95■■■□□ 2.38
LINC00543-201ENST00000567234 MARF1Q9Y4F3 1742 aaKnown RBP29.94■■■□□ 2.38
LINC00543-201ENST00000567234 CANXP27824 592 aaKnown RBP29.94■■■□□ 2.38
LINC00543-201ENST00000567234 PHF8Q9UPP1 1060 aa29.94■■■□□ 2.38
LINC00543-201ENST00000567234 TSR2Q969E8 191 aaKnown RBP29.94■■■□□ 2.38
LINC00543-201ENST00000567234 MSH6P52701 1360 aa29.94■■■□□ 2.38
LINC00543-201ENST00000567234 KIF24Q5T7B8 1368 aa29.94■■■□□ 2.38
LINC00543-201ENST00000567234 MST1RQ04912 1400 aa29.94■■■□□ 2.38
LINC00543-201ENST00000567234 C1orf167Q5SNV9 1468 aa29.94■■■□□ 2.38
LINC00543-201ENST00000567234 ATF3P18847 181 aa29.93■■■□□ 2.38
LINC00543-201ENST00000567234 DCCP43146 1447 aa29.93■■■□□ 2.38
LINC00543-201ENST00000567234 AAMPQ13685 434 aa29.93■■■□□ 2.38
LINC00543-201ENST00000567234 IPO9Q96P70 1041 aaKnown RBP29.93■■■□□ 2.38
LINC00543-201ENST00000567234 FLT4P35916 1363 aa29.92■■■□□ 2.38
LINC00543-201ENST00000567234 MAP3K19Q56UN5 1328 aa29.92■■■□□ 2.38
LINC00543-201ENST00000567234 KDM2BQ8NHM5 1336 aa29.92■■■□□ 2.38
LINC00543-201ENST00000567234 EXOSC9Q06265 439 aaKnown RBP29.92■■■□□ 2.38
LINC00543-201ENST00000567234 CENPQQ7L2Z9 268 aaPredicted RBP29.91■■■□□ 2.38
LINC00543-201ENST00000567234 AEBP2Q6ZN18 517 aaPredicted RBP29.89■■■□□ 2.38
LINC00543-201ENST00000567234 TCERG1O14776 1098 aaKnown RBP29.89■■■□□ 2.38
LINC00543-201ENST00000567234 HSP90AB2PQ58FF8 381 aa29.89■■■□□ 2.38
LINC00543-201ENST00000567234 ARHGEF10O15013 1369 aa29.88■■■□□ 2.37
LINC00543-201ENST00000567234 NLRP6P59044 892 aa29.88■■■□□ 2.37
LINC00543-201ENST00000567234 FRAT1Q92837 279 aaPredicted RBP29.87■■■□□ 2.37
LINC00543-201ENST00000567234 ZNF428Q96B54 188 aa29.87■■■□□ 2.37
LINC00543-201ENST00000567234 RTL5Q5HYW3 569 aaPredicted RBP29.87■■■□□ 2.37
LINC00543-201ENST00000567234 MS4A1P11836 297 aa29.86■■■□□ 2.37
LINC00543-201ENST00000567234 CADPS2Q86UW7 1296 aa29.86■■■□□ 2.37
LINC00543-201ENST00000567234 IFT57Q9NWB7 429 aa29.86■■■□□ 2.37
LINC00543-201ENST00000567234 LTBP4Q8N2S1 1624 aa29.85■■■□□ 2.37
LINC00543-201ENST00000567234 GNAI1P63096 354 aa29.85■■■□□ 2.37
LINC00543-201ENST00000567234 SULT6B1Q6IMI4 303 aa29.85■■■□□ 2.37
LINC00543-201ENST00000567234 FOXO3O43524 673 aa29.83■■■□□ 2.37
LINC00543-201ENST00000567234 ZNF853P0CG23 659 aa29.83■■■□□ 2.37
LINC00543-201ENST00000567234 ABTB2Q8N961 1025 aa29.83■■■□□ 2.37
LINC00543-201ENST00000567234 PANK1Q8TE04 598 aa29.83■■■□□ 2.37
LINC00543-201ENST00000567234 USP35Q9P2H5 1018 aa29.83■■■□□ 2.37
LINC00543-201ENST00000567234 KIF1AQ12756 1690 aa29.82■■■□□ 2.36
LINC00543-201ENST00000567234 PRKCSHP14314 528 aaPredicted RBP29.82■■■□□ 2.36
LINC00543-201ENST00000567234 AMPHP49418 695 aa29.82■■■□□ 2.36
LINC00543-201ENST00000567234 ALDH1L2Q3SY69 923 aa29.82■■■□□ 2.36
LINC00543-201ENST00000567234 ZKSCAN2Q63HK3 967 aa29.82■■■□□ 2.36
LINC00543-201ENST00000567234 XPCQ01831 940 aaPredicted RBP29.81■■■□□ 2.36
LINC00543-201ENST00000567234 SOX12O15370 315 aa29.8■■■□□ 2.36
LINC00543-201ENST00000567234 AEBP1Q8IUX7 1158 aa29.8■■■□□ 2.36
LINC00543-201ENST00000567234 BCL2L13Q9BXK5 485 aa29.8■■■□□ 2.36
LINC00543-201ENST00000567234 SMC4Q9NTJ3 1288 aa29.8■■■□□ 2.36
LINC00543-201ENST00000567234 COG6Q9Y2V7 657 aa29.8■■■□□ 2.36
LINC00543-201ENST00000567234 KDRP35968 1356 aa29.8■■■□□ 2.36
LINC00543-201ENST00000567234 CLUAP1Q96AJ1 413 aa29.8■■■□□ 2.36
LINC00543-201ENST00000567234 SSH1Q8WYL5 1049 aa29.79■■■□□ 2.36
LINC00543-201ENST00000567234 DDX17Q92841 729 aaKnown RBP29.78■■■□□ 2.36
LINC00543-201ENST00000567234 CFAP44Q96MT7 982 aa29.78■■■□□ 2.36
LINC00543-201ENST00000567234 PAK3O75914 559 aaPredicted RBP29.78■■■□□ 2.36
LINC00543-201ENST00000567234 BRPF1P55201 1214 aaPredicted RBP29.78■■■□□ 2.36
LINC00543-201ENST00000567234 PSME1Q06323 249 aa29.78■■■□□ 2.36
LINC00543-201ENST00000567234 ZBTB47Q9UFB7 747 aaPredicted RBP29.78■■■□□ 2.36
LINC00543-201ENST00000567234 RTL1A6NKG5 1358 aa29.77■■■□□ 2.36
LINC00543-201ENST00000567234 IGSF1Q8N6C5 1336 aa29.77■■■□□ 2.36
LINC00543-201ENST00000567234 KIF16BQ96L93 1317 aa29.76■■■□□ 2.35
LINC00543-201ENST00000567234 RLBP1P12271 317 aa29.75■■■□□ 2.35
LINC00543-201ENST00000567234 NUTM2GQ5VZR2 741 aa29.75■■■□□ 2.35
LINC00543-201ENST00000567234 HOXC9P31274 260 aa29.74■■■□□ 2.35
LINC00543-201ENST00000567234 DZIP1LQ8IYY4 767 aaKnown RBP29.74■■■□□ 2.35
LINC00543-201ENST00000567234 THUMPD2Q9BTF0 503 aaKnown RBP29.74■■■□□ 2.35
LINC00543-201ENST00000567234 TRPM3Q9HCF6 1732 aaPredicted RBP29.74■■■□□ 2.35
LINC00543-201ENST00000567234 LAS1LQ9Y4W2 734 aaKnown RBP29.73■■■□□ 2.35
LINC00543-201ENST00000567234 LTN1O94822 1766 aa29.73■■■□□ 2.35
LINC00543-201ENST00000567234 IPO8O15397 1037 aaKnown RBP29.73■■■□□ 2.35
LINC00543-201ENST00000567234 MVPQ14764 893 aaKnown RBP29.72■■■□□ 2.35
LINC00543-201ENST00000567234 MBIPQ9NS73 344 aa29.72■■■□□ 2.35
LINC00543-201ENST00000567234 SLAIN2Q9P270 581 aa29.72■■■□□ 2.35
LINC00543-201ENST00000567234 PHRF1Q9P1Y6 1649 aaKnown RBP29.72■■■□□ 2.35
LINC00543-201ENST00000567234 NFAT5O94916 1531 aa29.71■■■□□ 2.35
LINC00543-201ENST00000567234 ATF7IPQ6VMQ6 1270 aa29.71■■■□□ 2.35
LINC00543-201ENST00000567234 BRINP3Q76B58 766 aa29.71■■■□□ 2.35
LINC00543-201ENST00000567234 FTSJ3Q8IY81 847 aaKnown RBP29.71■■■□□ 2.35
LINC00543-201ENST00000567234 EYA1Q99502 592 aa29.71■■■□□ 2.35
LINC00543-201ENST00000567234 VAMP4O75379 141 aa29.69■■■□□ 2.34
LINC00543-201ENST00000567234 KRT28Q7Z3Y7 464 aa29.69■■■□□ 2.34
LINC00543-201ENST00000567234 KCNH5Q8NCM2 988 aa29.69■■■□□ 2.34
LINC00543-201ENST00000567234 TNNQ9UQP3 1299 aa29.69■■■□□ 2.34
LINC00543-201ENST00000567234 FAM83GA6ND36 823 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms