RNA–Protein interactions for RNA: ENST00000567195.5

COMMD4-217, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-217ENST00000567195 SPATA31A1Q5TZJ5 1347 aa21.57■■□□□ 1.04
COMMD4-217ENST00000567195 ONECUT3O60422 494 aaPredicted RBP21.57■■□□□ 1.04
COMMD4-217ENST00000567195 FAM98CQ17RN3 349 aaKnown RBP21.57■■□□□ 1.04
COMMD4-217ENST00000567195 LARP1Q6PKG0 1096 aaKnown RBP21.57■■□□□ 1.04
COMMD4-217ENST00000567195 AXIN2Q9Y2T1 843 aa21.57■■□□□ 1.04
COMMD4-217ENST00000567195 COL5A2P05997 1499 aaPredicted RBP21.57■■□□□ 1.04
COMMD4-217ENST00000567195 SEPT12Q8IYM1 358 aa21.56■■□□□ 1.04
COMMD4-217ENST00000567195 USP35Q9P2H5 1018 aa21.56■■□□□ 1.04
COMMD4-217ENST00000567195 KIF20BQ96Q89 1820 aa21.56■■□□□ 1.04
COMMD4-217ENST00000567195 COL18A1P39060 1754 aa21.56■■□□□ 1.04
COMMD4-217ENST00000567195 UPF1Q92900 1129 aaKnown RBP eCLIP21.55■■□□□ 1.047e-14■■■■■ 92.7
COMMD4-217ENST00000567195 ABCC6O95255 1503 aa21.55■■□□□ 1.04
COMMD4-217ENST00000567195 CSB-PGBD3P0DP91 1061 aa21.54■■□□□ 1.04
COMMD4-217ENST00000567195 TOM1L2Q6ZVM7 507 aa21.54■■□□□ 1.04
COMMD4-217ENST00000567195 CRB1P82279 1406 aa21.53■■□□□ 1.04
COMMD4-217ENST00000567195 WDR17Q8IZU2 1322 aa21.53■■□□□ 1.04
COMMD4-217ENST00000567195 CCDC7Q96M83 1385 aa21.52■■□□□ 1.04
COMMD4-217ENST00000567195 LTN1O94822 1766 aa21.52■■□□□ 1.04
COMMD4-217ENST00000567195 AMPHP49418 695 aa21.52■■□□□ 1.04
COMMD4-217ENST00000567195 TCP11L2Q8N4U5 519 aa21.52■■□□□ 1.04
COMMD4-217ENST00000567195 THRAP3Q9Y2W1 955 aaKnown RBP21.52■■□□□ 1.04
COMMD4-217ENST00000567195 ZEB1P37275 1124 aaPredicted RBP21.51■■□□□ 1.03
COMMD4-217ENST00000567195 BARGINQ6ZT62 677 aa21.51■■□□□ 1.03
COMMD4-217ENST00000567195 CCDC125Q86Z20 511 aa21.51■■□□□ 1.03
COMMD4-217ENST00000567195 IP6K1Q92551 441 aa21.51■■□□□ 1.03
COMMD4-217ENST00000567195 KNSTRNQ9Y448 316 aa21.51■■□□□ 1.03
COMMD4-217ENST00000567195 FBLN1P23142 703 aa21.5■■□□□ 1.03
COMMD4-217ENST00000567195 RGPD5Q99666 1765 aa21.5■■□□□ 1.03
COMMD4-217ENST00000567195 MAP3K19Q56UN5 1328 aa21.5■■□□□ 1.03
COMMD4-217ENST00000567195 WASHC2AQ641Q2 1341 aa21.5■■□□□ 1.03
COMMD4-217ENST00000567195 BRWD3Q6RI45 1802 aa21.48■■□□□ 1.03
COMMD4-217ENST00000567195 BLMP54132 1417 aaPredicted RBP21.48■■□□□ 1.03
COMMD4-217ENST00000567195 RRS1Q15050 365 aaKnown RBP21.48■■□□□ 1.03
COMMD4-217ENST00000567195 KRT27Q7Z3Y8 459 aa21.48■■□□□ 1.03
COMMD4-217ENST00000567195 HOXC9P31274 260 aa21.47■■□□□ 1.03
COMMD4-217ENST00000567195 ANKRD24Q8TF21 1146 aa21.47■■□□□ 1.03
COMMD4-217ENST00000567195 ERBB3P21860 1342 aa21.47■■□□□ 1.03
COMMD4-217ENST00000567195 NSD2O96028 1365 aa21.47■■□□□ 1.03
COMMD4-217ENST00000567195 CARD10Q9BWT7 1032 aa21.46■■□□□ 1.03
COMMD4-217ENST00000567195 RTL1A6NKG5 1358 aa21.46■■□□□ 1.03
COMMD4-217ENST00000567195 SF3B2Q13435 895 aaKnown RBP21.45■■□□□ 1.02
COMMD4-217ENST00000567195 THSD7AQ9UPZ6 1657 aa21.44■■□□□ 1.02
COMMD4-217ENST00000567195 LTV1Q96GA3 475 aaPredicted RBP21.44■■□□□ 1.02
COMMD4-217ENST00000567195 NLRP2Q9NX02 1062 aa21.44■■□□□ 1.02
COMMD4-217ENST00000567195 EP400Q96L91 3159 aa21.43■■□□□ 1.02
COMMD4-217ENST00000567195 KIF24Q5T7B8 1368 aa21.42■■□□□ 1.02
COMMD4-217ENST00000567195 MORC1Q86VD1 984 aa21.42■■□□□ 1.02
COMMD4-217ENST00000567195 CDCA7Q9BWT1 371 aaPredicted RBP21.42■■□□□ 1.02
COMMD4-217ENST00000567195 ANKRD26Q9UPS8 1709 aa21.42■■□□□ 1.02
COMMD4-217ENST00000567195 PPM1GO15355 546 aaPredicted RBP21.41■■□□□ 1.02
COMMD4-217ENST00000567195 TNNT2P45379 298 aaPredicted RBP21.41■■□□□ 1.02
COMMD4-217ENST00000567195 PDE3BQ13370 1112 aa21.41■■□□□ 1.02
COMMD4-217ENST00000567195 FLT4P35916 1363 aa21.4■■□□□ 1.02
COMMD4-217ENST00000567195 EMILIN1Q9Y6C2 1016 aa21.4■■□□□ 1.02
COMMD4-217ENST00000567195 PER1O15534 1290 aaPredicted RBP21.39■■□□□ 1.01
COMMD4-217ENST00000567195 AMER1Q5JTC6 1135 aaPredicted RBP21.39■■□□□ 1.01
COMMD4-217ENST00000567195 SMG6Q86US8 1419 aaKnown RBP21.38■■□□□ 1.01
COMMD4-217ENST00000567195 INSRP06213 1382 aa21.37■■□□□ 1.01
COMMD4-217ENST00000567195 DDB1Q16531 1140 aa21.37■■□□□ 1.01
COMMD4-217ENST00000567195 HSP90AB2PQ58FF8 381 aa21.37■■□□□ 1.01
COMMD4-217ENST00000567195 POLKQ9UBT6 870 aa21.37■■□□□ 1.01
COMMD4-217ENST00000567195 FAM208AQ9UK61 1670 aaKnown RBP21.36■■□□□ 1.01
COMMD4-217ENST00000567195 MAP2P11137 1827 aaKnown RBP21.36■■□□□ 1.01
COMMD4-217ENST00000567195 PARP4Q9UKK3 1724 aaKnown RBP21.35■■□□□ 1.01
COMMD4-217ENST00000567195 FAM182BQ5T319 152 aa21.35■■□□□ 1.01
COMMD4-217ENST00000567195 FAM196AQ6ZSG2 479 aa21.35■■□□□ 1.01
COMMD4-217ENST00000567195 EXOC5O00471 708 aa21.34■■□□□ 1.01
COMMD4-217ENST00000567195 IL2RBP14784 551 aa21.34■■□□□ 1.01
COMMD4-217ENST00000567195 CC2D1BQ5T0F9 858 aaKnown RBP21.34■■□□□ 1.01
COMMD4-217ENST00000567195 PEAK1Q9H792 1746 aa21.34■■□□□ 1.01
COMMD4-217ENST00000567195 DISP2A7MBM2 1401 aa21.33■■□□□ 1.01
COMMD4-217ENST00000567195 WNK3Q9BYP7 1800 aa21.33■■□□□ 1.01
COMMD4-217ENST00000567195 NBPF6Q5VWK0 638 aa21.31■■□□□ 1
COMMD4-217ENST00000567195 NBPF4Q96M43 638 aa21.31■■□□□ 1
COMMD4-217ENST00000567195 NPC1L1Q9UHC9 1359 aa21.31■■□□□ 1
COMMD4-217ENST00000567195 BAG6P46379 1132 aa21.3■■□□□ 1
COMMD4-217ENST00000567195 LRRC37A3O60309 1634 aa21.29■■□□□ 1
COMMD4-217ENST00000567195 CNGB1Q14028 1251 aaPredicted RBP21.29■■□□□ 1
COMMD4-217ENST00000567195 RGPD1P0DJD0 1748 aa21.29■■□□□ 1
COMMD4-217ENST00000567195 USHBP1Q8N6Y0 703 aa21.27■■□□□ 1
COMMD4-217ENST00000567195 RGPD2P0DJD1 1756 aa21.27■■□□□ 1
COMMD4-217ENST00000567195 RAPGEF4Q8WZA2 1011 aa21.26■□□□□ 0.99
COMMD4-217ENST00000567195 OVOS2A0A0G2JMS6 1433 aa21.26■□□□□ 0.99
COMMD4-217ENST00000567195 TNS2Q63HR2 1409 aa21.26■□□□□ 0.99
COMMD4-217ENST00000567195 MARCH10Q8NA82 808 aaPredicted RBP21.25■□□□□ 0.99
COMMD4-217ENST00000567195 TRIM37O94972 964 aa21.24■□□□□ 0.99
COMMD4-217ENST00000567195 EIF4A2Q14240 407 aaKnown RBP21.24■□□□□ 0.99
COMMD4-217ENST00000567195 TATP17735 454 aaPredicted RBP21.23■□□□□ 0.99
COMMD4-217ENST00000567195 EYA1Q99502 592 aa21.23■□□□□ 0.99
COMMD4-217ENST00000567195 MTHFSP49914 203 aa21.22■□□□□ 0.99
COMMD4-217ENST00000567195 ZCRB1Q8TBF4 217 aaKnown RBP21.22■□□□□ 0.99
COMMD4-217ENST00000567195 DDX54Q8TDD1 881 aaKnown RBP21.2■□□□□ 0.98
COMMD4-217ENST00000567195 MEGF6O75095 1541 aa21.19■□□□□ 0.98
COMMD4-217ENST00000567195 DDX10Q13206 875 aaKnown RBP21.19■□□□□ 0.98
COMMD4-217ENST00000567195 DEFB132Q7Z7B7 95 aa21.19■□□□□ 0.98
COMMD4-217ENST00000567195 BCL9O00512 1426 aa21.19■□□□□ 0.98
COMMD4-217ENST00000567195 APBA3O96018 575 aa21.18■□□□□ 0.98
COMMD4-217ENST00000567195 NCAPD2Q15021 1401 aa21.17■□□□□ 0.98
COMMD4-217ENST00000567195 PARD3Q8TEW0 1356 aa21.16■□□□□ 0.98
COMMD4-217ENST00000567195 IGSF1Q8N6C5 1336 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms