RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 KIF24Q5T7B8 1368 aa23.37■■□□□ 1.33
HERC2-208ENST00000566635 SPATA31A3Q5VYP0 1347 aa23.37■■□□□ 1.33
HERC2-208ENST00000566635 CDCA7LQ96GN5 454 aa23.36■■□□□ 1.33
HERC2-208ENST00000566635 RTL1A6NKG5 1358 aa23.36■■□□□ 1.33
HERC2-208ENST00000566635 GCP02774 474 aa23.36■■□□□ 1.33
HERC2-208ENST00000566635 ROBO1Q9Y6N7 1651 aa23.36■■□□□ 1.33
HERC2-208ENST00000566635 NEUROD2Q15784 382 aa23.35■■□□□ 1.33
HERC2-208ENST00000566635 SOS2Q07890 1332 aaPredicted RBP23.35■■□□□ 1.33
HERC2-208ENST00000566635 ZBTB7CA1YPR0 619 aa23.34■■□□□ 1.33
HERC2-208ENST00000566635 FCHSD2O94868 740 aa23.34■■□□□ 1.33
HERC2-208ENST00000566635 PRKAR2BP31323 418 aa23.34■■□□□ 1.33
HERC2-208ENST00000566635 MAPK8IP3Q9UPT6 1336 aa23.34■■□□□ 1.33
HERC2-208ENST00000566635 PDE3BQ13370 1112 aa23.33■■□□□ 1.33
HERC2-208ENST00000566635 GTF3C3Q9Y5Q9 886 aa23.33■■□□□ 1.33
HERC2-208ENST00000566635 ARHGEF10O15013 1369 aa23.32■■□□□ 1.32
HERC2-208ENST00000566635 AEBP1Q8IUX7 1158 aa23.32■■□□□ 1.32
HERC2-208ENST00000566635 CABLES1Q8TDN4 633 aa23.3■■□□□ 1.32
HERC2-208ENST00000566635 ARHGEF25Q86VW2 580 aa23.3■■□□□ 1.32
HERC2-208ENST00000566635 PNNQ9H307 717 aaKnown RBP23.3■■□□□ 1.32
HERC2-208ENST00000566635 SULT6B1Q6IMI4 303 aa23.29■■□□□ 1.32
HERC2-208ENST00000566635 IP6K1Q92551 441 aa23.29■■□□□ 1.32
HERC2-208ENST00000566635 NGEFQ8N5V2 710 aa23.29■■□□□ 1.32
HERC2-208ENST00000566635 LTV1Q96GA3 475 aaPredicted RBP23.29■■□□□ 1.32
HERC2-208ENST00000566635 TMPOP42166 694 aaKnown RBP23.28■■□□□ 1.32
HERC2-208ENST00000566635 WWC1Q8IX03 1113 aa23.28■■□□□ 1.32
HERC2-208ENST00000566635 PHACTR3Q96KR7 559 aa23.28■■□□□ 1.32
HERC2-208ENST00000566635 ABCA3Q99758 1704 aa23.28■■□□□ 1.32
HERC2-208ENST00000566635 PHF23Q9BUL5 403 aaPredicted RBP23.27■■□□□ 1.32
HERC2-208ENST00000566635 ZC3H6P61129 1189 aaKnown RBP23.27■■□□□ 1.32
HERC2-208ENST00000566635 GOLGA2Q08379 1002 aa23.27■■□□□ 1.32
HERC2-208ENST00000566635 RGPD5Q99666 1765 aa23.26■■□□□ 1.31
HERC2-208ENST00000566635 EYA1Q99502 592 aa23.26■■□□□ 1.31
HERC2-208ENST00000566635 IGSF1Q8N6C5 1336 aa23.26■■□□□ 1.31
HERC2-208ENST00000566635 AHDC1Q5TGY3 1603 aaPredicted RBP23.26■■□□□ 1.31
HERC2-208ENST00000566635 SPINK5Q9NQ38 1064 aaPredicted RBP23.26■■□□□ 1.31
HERC2-208ENST00000566635 RGPD2P0DJD1 1756 aa23.25■■□□□ 1.31
HERC2-208ENST00000566635 MYT1Q01538 1121 aa23.24■■□□□ 1.31
HERC2-208ENST00000566635 CCDC27Q2M243 656 aa23.24■■□□□ 1.31
HERC2-208ENST00000566635 SUPT16HQ9Y5B9 1047 aaKnown RBP23.24■■□□□ 1.31
HERC2-208ENST00000566635 DLG5Q8TDM6 1919 aa23.23■■□□□ 1.31
HERC2-208ENST00000566635 NEFMP07197 916 aa23.23■■□□□ 1.31
HERC2-208ENST00000566635 KDRP35968 1356 aa23.23■■□□□ 1.31
HERC2-208ENST00000566635 COL18A1P39060 1754 aa23.23■■□□□ 1.31
HERC2-208ENST00000566635 RIPK4P57078 832 aa23.22■■□□□ 1.31
HERC2-208ENST00000566635 SLFN5Q08AF3 891 aa23.22■■□□□ 1.31
HERC2-208ENST00000566635 NCBP3Q53F19 620 aaKnown RBP23.22■■□□□ 1.31
HERC2-208ENST00000566635 TRIM35Q9UPQ4 493 aa23.22■■□□□ 1.31
HERC2-208ENST00000566635 DUSP27Q5VZP5 1158 aa23.21■■□□□ 1.31
HERC2-208ENST00000566635 NFE2L2Q16236 605 aa23.21■■□□□ 1.31
HERC2-208ENST00000566635 AXIN2Q9Y2T1 843 aa23.21■■□□□ 1.31
HERC2-208ENST00000566635 USHBP1Q8N6Y0 703 aa23.2■■□□□ 1.3
HERC2-208ENST00000566635 KIAA0232Q92628 1395 aa23.19■■□□□ 1.3
HERC2-208ENST00000566635 E9PSI1 815 aa23.18■■□□□ 1.3
HERC2-208ENST00000566635 TRMT2AQ8IZ69 625 aaKnown RBP23.18■■□□□ 1.3
HERC2-208ENST00000566635 LRRC59Q96AG4 307 aaKnown RBP23.18■■□□□ 1.3
HERC2-208ENST00000566635 CAMTA1Q9Y6Y1 1673 aa23.17■■□□□ 1.3
HERC2-208ENST00000566635 CHRNA2Q15822 529 aa23.17■■□□□ 1.3
HERC2-208ENST00000566635 WDR63Q8IWG1 891 aa23.17■■□□□ 1.3
HERC2-208ENST00000566635 ANKRD24Q8TF21 1146 aa23.17■■□□□ 1.3
HERC2-208ENST00000566635 PHLPP1O60346 1717 aa23.17■■□□□ 1.3
HERC2-208ENST00000566635 CPDO75976 1380 aa23.17■■□□□ 1.3
HERC2-208ENST00000566635 NBPF6Q5VWK0 638 aa23.17■■□□□ 1.3
HERC2-208ENST00000566635 NBPF4Q96M43 638 aa23.17■■□□□ 1.3
HERC2-208ENST00000566635 ABCC6O95255 1503 aa23.17■■□□□ 1.3
HERC2-208ENST00000566635 COL16A1Q07092 1604 aaPredicted RBP23.15■■□□□ 1.3
HERC2-208ENST00000566635 TOM1O60784 492 aa23.14■■□□□ 1.3
HERC2-208ENST00000566635 PIP4K2BP78356 416 aa23.14■■□□□ 1.3
HERC2-208ENST00000566635 ERBB3P21860 1342 aa23.13■■□□□ 1.29
HERC2-208ENST00000566635 LMO7Q8WWI1 1683 aa23.13■■□□□ 1.29
HERC2-208ENST00000566635 COL22A1Q8NFW1 1626 aaPredicted RBP23.12■■□□□ 1.29
HERC2-208ENST00000566635 HAP1P54257 671 aaPredicted RBP23.12■■□□□ 1.29
HERC2-208ENST00000566635 RCAN3Q9UKA8 241 aa23.12■■□□□ 1.29
HERC2-208ENST00000566635 NCAPD2Q15021 1401 aa23.12■■□□□ 1.29
HERC2-208ENST00000566635 UBAP1LF5GYI3 381 aa23.11■■□□□ 1.29
HERC2-208ENST00000566635 THUMPD2Q9BTF0 503 aaKnown RBP23.11■■□□□ 1.29
HERC2-208ENST00000566635 FAM208AQ9UK61 1670 aaKnown RBP23.1■■□□□ 1.29
HERC2-208ENST00000566635 MTHFSDQ2M296 383 aaKnown RBP23.1■■□□□ 1.29
HERC2-208ENST00000566635 FAM83GA6ND36 823 aa23.09■■□□□ 1.29
HERC2-208ENST00000566635 NEFLP07196 543 aa23.09■■□□□ 1.29
HERC2-208ENST00000566635 IRX6P78412 446 aaPredicted RBP23.09■■□□□ 1.29
HERC2-208ENST00000566635 PRDM11Q9NQV5 511 aa23.09■■□□□ 1.29
HERC2-208ENST00000566635 FKBP8Q14318 412 aa23.09■■□□□ 1.29
HERC2-208ENST00000566635 LMOD3Q0VAK6 560 aa23.07■■□□□ 1.28
HERC2-208ENST00000566635 DCTN1Q14203 1278 aa23.07■■□□□ 1.28
HERC2-208ENST00000566635 IL16Q14005 1332 aa23.07■■□□□ 1.28
HERC2-208ENST00000566635 RNF123Q5XPI4 1314 aa23.07■■□□□ 1.28
HERC2-208ENST00000566635 TSR2Q969E8 191 aaKnown RBP23.06■■□□□ 1.28
HERC2-208ENST00000566635 FANCIQ9NVI1 1328 aa23.06■■□□□ 1.28
HERC2-208ENST00000566635 MYH16Q9H6N6 1097 aa23.06■■□□□ 1.28
HERC2-208ENST00000566635 CSB-PGBD3P0DP91 1061 aa23.04■■□□□ 1.28
HERC2-208ENST00000566635 GAS2L2Q8NHY3 880 aa23.04■■□□□ 1.28
HERC2-208ENST00000566635 CERKQ8TCT0 537 aa23.03■■□□□ 1.28
HERC2-208ENST00000566635 NLRP2Q9NX02 1062 aa23.03■■□□□ 1.28
HERC2-208ENST00000566635 COL5A2P05997 1499 aaPredicted RBP23.03■■□□□ 1.28
HERC2-208ENST00000566635 MCM10Q7L590 875 aa23.03■■□□□ 1.28
HERC2-208ENST00000566635 LAS1LQ9Y4W2 734 aaKnown RBP23.02■■□□□ 1.28
HERC2-208ENST00000566635 RRP1P56182 461 aaKnown RBP23.01■■□□□ 1.27
HERC2-208ENST00000566635 LRRC37A3O60309 1634 aa23.01■■□□□ 1.27
HERC2-208ENST00000566635 CALD1Q05682 793 aaKnown RBP23■■□□□ 1.27
HERC2-208ENST00000566635 MAP3K5Q99683 1374 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms