RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 LTN1O94822 1766 aa17.68■□□□□ 0.42
LPCAT4-206ENST00000566581 ABCC6O95255 1503 aa17.68■□□□□ 0.42
LPCAT4-206ENST00000566581 CRB1P82279 1406 aa17.68■□□□□ 0.42
LPCAT4-206ENST00000566581 AXIN2Q9Y2T1 843 aa17.68■□□□□ 0.42
LPCAT4-206ENST00000566581 ANKRD36BQ8N2N9 1353 aa17.67■□□□□ 0.42
LPCAT4-206ENST00000566581 USP35Q9P2H5 1018 aa17.67■□□□□ 0.42
LPCAT4-206ENST00000566581 ZBTB7CA1YPR0 619 aa17.66■□□□□ 0.42
LPCAT4-206ENST00000566581 PARP4Q9UKK3 1724 aaKnown RBP17.66■□□□□ 0.42
LPCAT4-206ENST00000566581 OVOS2A0A0J9YW53 1432 aa17.65■□□□□ 0.42
LPCAT4-206ENST00000566581 OVOS2Q6IE36 1432 aa17.65■□□□□ 0.42
LPCAT4-206ENST00000566581 SOX12O15370 315 aa17.65■□□□□ 0.42
LPCAT4-206ENST00000566581 WDR17Q8IZU2 1322 aa17.65■□□□□ 0.42
LPCAT4-206ENST00000566581 SF3B2Q13435 895 aaKnown RBP17.63■□□□□ 0.41
LPCAT4-206ENST00000566581 RGPD1P0DJD0 1748 aa17.63■□□□□ 0.41
LPCAT4-206ENST00000566581 WNK3Q9BYP7 1800 aa17.63■□□□□ 0.41
LPCAT4-206ENST00000566581 MYOM1P52179 1685 aa17.62■□□□□ 0.41
LPCAT4-206ENST00000566581 EIF4G2P78344 907 aaKnown RBP eCLIP17.62■□□□□ 0.41
LPCAT4-206ENST00000566581 TOM1L2Q6ZVM7 507 aa17.62■□□□□ 0.41
LPCAT4-206ENST00000566581 PDE3BQ13370 1112 aa17.61■□□□□ 0.41
LPCAT4-206ENST00000566581 FAM196AQ6ZSG2 479 aa17.61■□□□□ 0.41
LPCAT4-206ENST00000566581 COG3Q96JB2 828 aa17.61■□□□□ 0.41
LPCAT4-206ENST00000566581 CARD10Q9BWT7 1032 aa17.61■□□□□ 0.41
LPCAT4-206ENST00000566581 FAM182BQ5T319 152 aa17.6■□□□□ 0.41
LPCAT4-206ENST00000566581 KIF20BQ96Q89 1820 aa17.59■□□□□ 0.41
LPCAT4-206ENST00000566581 FYB1O15117 783 aa17.59■□□□□ 0.41
LPCAT4-206ENST00000566581 CDCA7Q9BWT1 371 aaPredicted RBP17.59■□□□□ 0.41
LPCAT4-206ENST00000566581 C11orf95C9JLR9 678 aaPredicted RBP17.58■□□□□ 0.4
LPCAT4-206ENST00000566581 CSB-PGBD3P0DP91 1061 aa17.58■□□□□ 0.4
LPCAT4-206ENST00000566581 TNS1Q9HBL0 1735 aaKnown RBP17.58■□□□□ 0.4
LPCAT4-206ENST00000566581 ERBB3P21860 1342 aa17.57■□□□□ 0.4
LPCAT4-206ENST00000566581 SBF2Q86WG5 1849 aa17.57■□□□□ 0.4
LPCAT4-206ENST00000566581 HSPA5P11021 654 aaKnown RBP17.57■□□□□ 0.4
LPCAT4-206ENST00000566581 DEFB132Q7Z7B7 95 aa17.57■□□□□ 0.4
LPCAT4-206ENST00000566581 IP6K1Q92551 441 aa17.57■□□□□ 0.4
LPCAT4-206ENST00000566581 CCDC7Q96M83 1385 aa17.56■□□□□ 0.4
LPCAT4-206ENST00000566581 SRCAPQ6ZRS2 3230 aa17.56■□□□□ 0.4
LPCAT4-206ENST00000566581 KAT6BQ8WYB5 2073 aa17.56■□□□□ 0.4
LPCAT4-206ENST00000566581 BAG6P46379 1132 aa17.56■□□□□ 0.4
LPCAT4-206ENST00000566581 LRRC37A3O60309 1634 aa17.56■□□□□ 0.4
LPCAT4-206ENST00000566581 CARD14Q9BXL6 1004 aa17.55■□□□□ 0.4
LPCAT4-206ENST00000566581 PEAK1Q9H792 1746 aa17.55■□□□□ 0.4
LPCAT4-206ENST00000566581 DISP2A7MBM2 1401 aa17.55■□□□□ 0.4
LPCAT4-206ENST00000566581 FAM208AQ9UK61 1670 aaKnown RBP17.55■□□□□ 0.4
LPCAT4-206ENST00000566581 DDB1Q16531 1140 aa17.54■□□□□ 0.4
LPCAT4-206ENST00000566581 GGNBP2Q9H3C7 697 aa17.54■□□□□ 0.4
LPCAT4-206ENST00000566581 MAP3K19Q56UN5 1328 aa17.53■□□□□ 0.4
LPCAT4-206ENST00000566581 ANKRD24Q8TF21 1146 aa17.53■□□□□ 0.4
LPCAT4-206ENST00000566581 TRIM37O94972 964 aa17.52■□□□□ 0.4
LPCAT4-206ENST00000566581 NLRP2Q9NX02 1062 aa17.52■□□□□ 0.4
LPCAT4-206ENST00000566581 MAP2P11137 1827 aaKnown RBP17.51■□□□□ 0.39
LPCAT4-206ENST00000566581 OVOS2A0A0G2JMS6 1433 aa17.51■□□□□ 0.39
LPCAT4-206ENST00000566581 NSD3Q9BZ95 1437 aa17.51■□□□□ 0.39
LPCAT4-206ENST00000566581 BCL9O00512 1426 aa17.5■□□□□ 0.39
LPCAT4-206ENST00000566581 EXOC5O00471 708 aa17.5■□□□□ 0.39
LPCAT4-206ENST00000566581 FBLN1P23142 703 aa17.5■□□□□ 0.39
LPCAT4-206ENST00000566581 HOXC9P31274 260 aa17.5■□□□□ 0.39
LPCAT4-206ENST00000566581 AMPHP49418 695 aa17.5■□□□□ 0.39
LPCAT4-206ENST00000566581 EN1Q05925 392 aaPredicted RBP17.5■□□□□ 0.39
LPCAT4-206ENST00000566581 RGPD2P0DJD1 1756 aa17.5■□□□□ 0.39
LPCAT4-206ENST00000566581 RTL1A6NKG5 1358 aa17.5■□□□□ 0.39
LPCAT4-206ENST00000566581 CGNL1Q0VF96 1302 aa17.48■□□□□ 0.39
LPCAT4-206ENST00000566581 MARCH10Q8NA82 808 aaPredicted RBP17.48■□□□□ 0.39
LPCAT4-206ENST00000566581 KIF24Q5T7B8 1368 aa17.48■□□□□ 0.39
LPCAT4-206ENST00000566581 APBA3O96018 575 aa17.47■□□□□ 0.39
LPCAT4-206ENST00000566581 IL2RBP14784 551 aa17.47■□□□□ 0.39
LPCAT4-206ENST00000566581 RRS1Q15050 365 aaKnown RBP17.47■□□□□ 0.39
LPCAT4-206ENST00000566581 CAMKK2Q96RR4 588 aa17.47■□□□□ 0.39
LPCAT4-206ENST00000566581 PARD3Q8TEW0 1356 aa17.47■□□□□ 0.39
LPCAT4-206ENST00000566581 ANKRD26Q9UPS8 1709 aa17.47■□□□□ 0.39
LPCAT4-206ENST00000566581 POLR3GLQ9BT43 218 aa17.46■□□□□ 0.39
LPCAT4-206ENST00000566581 TNS2Q63HR2 1409 aa17.46■□□□□ 0.39
LPCAT4-206ENST00000566581 RGPD3A6NKT7 1758 aaPredicted RBP17.45■□□□□ 0.38
LPCAT4-206ENST00000566581 RGPD4Q7Z3J3 1758 aa17.45■□□□□ 0.38
LPCAT4-206ENST00000566581 EZH2Q15910 746 aaKnown RBP17.44■□□□□ 0.38
LPCAT4-206ENST00000566581 LTV1Q96GA3 475 aaPredicted RBP17.44■□□□□ 0.38
LPCAT4-206ENST00000566581 INSRP06213 1382 aa17.43■□□□□ 0.38
LPCAT4-206ENST00000566581 RREB1Q92766 1687 aa17.43■□□□□ 0.38
LPCAT4-206ENST00000566581 BCL11BQ9C0K0 894 aaPredicted RBP17.43■□□□□ 0.38
LPCAT4-206ENST00000566581 PANK3Q9H999 370 aa17.43■□□□□ 0.38
LPCAT4-206ENST00000566581 FLT4P35916 1363 aa17.42■□□□□ 0.38
LPCAT4-206ENST00000566581 PLSCR1O15162 318 aa17.42■□□□□ 0.38
LPCAT4-206ENST00000566581 HSP90AB2PQ58FF8 381 aa17.41■□□□□ 0.38
LPCAT4-206ENST00000566581 SMG6Q86US8 1419 aaKnown RBP17.4■□□□□ 0.38
LPCAT4-206ENST00000566581 NUP188Q5SRE5 1749 aa17.39■□□□□ 0.37
LPCAT4-206ENST00000566581 NBPF6Q5VWK0 638 aa17.39■□□□□ 0.37
LPCAT4-206ENST00000566581 NBPF4Q96M43 638 aa17.39■□□□□ 0.37
LPCAT4-206ENST00000566581 EMILIN1Q9Y6C2 1016 aa17.38■□□□□ 0.37
LPCAT4-206ENST00000566581 WASHC2AQ641Q2 1341 aa17.38■□□□□ 0.37
LPCAT4-206ENST00000566581 NHSQ6T4R5 1651 aa17.38■□□□□ 0.37
LPCAT4-206ENST00000566581 NSD2O96028 1365 aa17.38■□□□□ 0.37
LPCAT4-206ENST00000566581 PTF1AQ7RTS3 328 aa17.37■□□□□ 0.37
LPCAT4-206ENST00000566581 POLKQ9UBT6 870 aa17.37■□□□□ 0.37
LPCAT4-206ENST00000566581 SHANK3Q9BYB0 1731 aa17.37■□□□□ 0.37
LPCAT4-206ENST00000566581 KIF7Q2M1P5 1343 aa17.37■□□□□ 0.37
LPCAT4-206ENST00000566581 ZCRB1Q8TBF4 217 aaKnown RBP17.35■□□□□ 0.37
LPCAT4-206ENST00000566581 KNSTRNQ9Y448 316 aa17.35■□□□□ 0.37
LPCAT4-206ENST00000566581 BTAF1O14981 1849 aa17.35■□□□□ 0.37
LPCAT4-206ENST00000566581 PPM1GO15355 546 aaPredicted RBP17.34■□□□□ 0.37
LPCAT4-206ENST00000566581 MEGF6O75095 1541 aa17.34■□□□□ 0.37
LPCAT4-206ENST00000566581 RAPGEF4Q8WZA2 1011 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms