RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 TMC1Q8TDI8 760 aa25.94■■□□□ 1.74
USB1-213ENST00000566292 SLC12A5Q9H2X9 1139 aa25.94■■□□□ 1.74
USB1-213ENST00000566292 PEAK1Q9H792 1746 aa25.93■■□□□ 1.74
USB1-213ENST00000566292 USP31Q70CQ4 1352 aa25.93■■□□□ 1.74
USB1-213ENST00000566292 WDR17Q8IZU2 1322 aa25.92■■□□□ 1.74
USB1-213ENST00000566292 TOM1L2Q6ZVM7 507 aa25.92■■□□□ 1.74
USB1-213ENST00000566292 TESK2Q96S53 571 aa25.92■■□□□ 1.74
USB1-213ENST00000566292 ST20-MTHFSA0A0A6YYL1 179 aa25.91■■□□□ 1.74
USB1-213ENST00000566292 EZH2Q15910 746 aaKnown RBP25.91■■□□□ 1.74
USB1-213ENST00000566292 NME9Q86XW9 330 aa25.91■■□□□ 1.74
USB1-213ENST00000566292 PUS7Q96PZ0 661 aaKnown RBP25.91■■□□□ 1.74
USB1-213ENST00000566292 LTN1O94822 1766 aa25.91■■□□□ 1.74
USB1-213ENST00000566292 ABCC6O95255 1503 aa25.9■■□□□ 1.74
USB1-213ENST00000566292 HDGFL2Q7Z4V5 671 aaPredicted RBP25.9■■□□□ 1.74
USB1-213ENST00000566292 A0A1W2PP64 1363 aa25.9■■□□□ 1.74
USB1-213ENST00000566292 SBF2Q86WG5 1849 aa25.9■■□□□ 1.74
USB1-213ENST00000566292 EDC4Q6P2E9 1401 aaKnown RBP25.89■■□□□ 1.74
USB1-213ENST00000566292 PSDA5PKW4 1024 aaPredicted RBP25.89■■□□□ 1.74
USB1-213ENST00000566292 CAMKK2Q96RR4 588 aa25.89■■□□□ 1.74
USB1-213ENST00000566292 RREB1Q92766 1687 aa25.89■■□□□ 1.73
USB1-213ENST00000566292 APBA3O96018 575 aa25.87■■□□□ 1.73
USB1-213ENST00000566292 LRP5O75197 1615 aa25.87■■□□□ 1.73
USB1-213ENST00000566292 TERF2IPQ9NYB0 399 aa25.85■■□□□ 1.73
USB1-213ENST00000566292 NUP188Q5SRE5 1749 aa25.85■■□□□ 1.73
USB1-213ENST00000566292 OVOS2A0A0G2JMS6 1433 aa25.84■■□□□ 1.73
USB1-213ENST00000566292 OVOS2A0A0J9YW53 1432 aa25.84■■□□□ 1.73
USB1-213ENST00000566292 DDB1Q16531 1140 aa25.84■■□□□ 1.73
USB1-213ENST00000566292 OVOS2Q6IE36 1432 aa25.84■■□□□ 1.73
USB1-213ENST00000566292 CARD10Q9BWT7 1032 aa25.84■■□□□ 1.73
USB1-213ENST00000566292 CSB-PGBD3P0DP91 1061 aa25.83■■□□□ 1.73
USB1-213ENST00000566292 PARD3Q8TEW0 1356 aa25.82■■□□□ 1.72
USB1-213ENST00000566292 NINLQ9Y2I6 1382 aa25.82■■□□□ 1.72
USB1-213ENST00000566292 C11orf95C9JLR9 678 aaPredicted RBP25.8■■□□□ 1.72
USB1-213ENST00000566292 R3HDM1Q15032 1099 aaKnown RBP25.8■■□□□ 1.72
USB1-213ENST00000566292 USP47Q96K76 1375 aa25.8■■□□□ 1.72
USB1-213ENST00000566292 CDCA7Q9BWT1 371 aaPredicted RBP25.79■■□□□ 1.72
USB1-213ENST00000566292 MARCH10Q8NA82 808 aaPredicted RBP25.78■■□□□ 1.72
USB1-213ENST00000566292 ERBB3P21860 1342 aa25.78■■□□□ 1.72
USB1-213ENST00000566292 CCDC7Q96M83 1385 aa25.78■■□□□ 1.72
USB1-213ENST00000566292 RGPD3A6NKT7 1758 aaPredicted RBP25.77■■□□□ 1.72
USB1-213ENST00000566292 RGPD4Q7Z3J3 1758 aa25.77■■□□□ 1.72
USB1-213ENST00000566292 SLC24A1O60721 1099 aa25.77■■□□□ 1.72
USB1-213ENST00000566292 PTF1AQ7RTS3 328 aa25.74■■□□□ 1.71
USB1-213ENST00000566292 BCL9O00512 1426 aa25.73■■□□□ 1.71
USB1-213ENST00000566292 ANKRD36BQ8N2N9 1353 aa25.73■■□□□ 1.71
USB1-213ENST00000566292 ANKRD24Q8TF21 1146 aa25.72■■□□□ 1.71
USB1-213ENST00000566292 TNS2Q63HR2 1409 aa25.71■■□□□ 1.71
USB1-213ENST00000566292 EXOC5O00471 708 aa25.71■■□□□ 1.71
USB1-213ENST00000566292 TMF1P82094 1093 aa25.71■■□□□ 1.71
USB1-213ENST00000566292 NLRP2Q9NX02 1062 aa25.71■■□□□ 1.71
USB1-213ENST00000566292 BCL11BQ9C0K0 894 aaPredicted RBP25.7■■□□□ 1.7
USB1-213ENST00000566292 FAM208AQ9UK61 1670 aaKnown RBP25.7■■□□□ 1.7
USB1-213ENST00000566292 PCGF6Q9BYE7 350 aa25.69■■□□□ 1.7
USB1-213ENST00000566292 PLSCR1O15162 318 aa25.68■■□□□ 1.7
USB1-213ENST00000566292 COG3Q96JB2 828 aa25.68■■□□□ 1.7
USB1-213ENST00000566292 MYOM1P52179 1685 aa25.68■■□□□ 1.7
USB1-213ENST00000566292 CLSPNQ9HAW4 1339 aa25.67■■□□□ 1.7
USB1-213ENST00000566292 IP6K1Q92551 441 aa25.67■■□□□ 1.7
USB1-213ENST00000566292 TIMELESSQ9UNS1 1208 aa25.67■■□□□ 1.7
USB1-213ENST00000566292 KIF20BQ96Q89 1820 aa25.66■■□□□ 1.7
USB1-213ENST00000566292 FBLN1P23142 703 aa25.66■■□□□ 1.7
USB1-213ENST00000566292 RGPD2P0DJD1 1756 aa25.66■■□□□ 1.7
USB1-213ENST00000566292 NHSQ6T4R5 1651 aa25.65■■□□□ 1.7
USB1-213ENST00000566292 IL2RBP14784 551 aa25.65■■□□□ 1.7
USB1-213ENST00000566292 NBPF14Q5TI25 921 aa25.65■■□□□ 1.7
USB1-213ENST00000566292 MAP3K19Q56UN5 1328 aa25.64■■□□□ 1.7
USB1-213ENST00000566292 FYB1O15117 783 aa25.62■■□□□ 1.69
USB1-213ENST00000566292 PROM2Q8N271 834 aa25.61■■□□□ 1.69
USB1-213ENST00000566292 LTV1Q96GA3 475 aaPredicted RBP25.61■■□□□ 1.69
USB1-213ENST00000566292 KCNQ2O43526 872 aa25.6■■□□□ 1.69
USB1-213ENST00000566292 HOXC9P31274 260 aa25.6■■□□□ 1.69
USB1-213ENST00000566292 CDCA8Q53HL2 280 aa25.6■■□□□ 1.69
USB1-213ENST00000566292 GGNBP2Q9H3C7 697 aa25.6■■□□□ 1.69
USB1-213ENST00000566292 KAT6BQ8WYB5 2073 aa25.6■■□□□ 1.69
USB1-213ENST00000566292 AMPHP49418 695 aa25.58■■□□□ 1.69
USB1-213ENST00000566292 ANO8Q9HCE9 1232 aaPredicted RBP25.58■■□□□ 1.69
USB1-213ENST00000566292 BTAF1O14981 1849 aa25.58■■□□□ 1.68
USB1-213ENST00000566292 RRS1Q15050 365 aaKnown RBP25.56■■□□□ 1.68
USB1-213ENST00000566292 ACSBG1Q96GR2 724 aa25.56■■□□□ 1.68
USB1-213ENST00000566292 CASZ1Q86V15 1759 aa25.56■■□□□ 1.68
USB1-213ENST00000566292 RTL1A6NKG5 1358 aa25.56■■□□□ 1.68
USB1-213ENST00000566292 SHANK3Q9BYB0 1731 aa25.55■■□□□ 1.68
USB1-213ENST00000566292 CARD14Q9BXL6 1004 aa25.54■■□□□ 1.68
USB1-213ENST00000566292 TXNRD1Q16881 649 aa25.53■■□□□ 1.68
USB1-213ENST00000566292 NSD3Q9BZ95 1437 aa25.52■■□□□ 1.68
USB1-213ENST00000566292 MEGF6O75095 1541 aa25.5■■□□□ 1.67
USB1-213ENST00000566292 DDX54Q8TDD1 881 aaKnown RBP25.48■■□□□ 1.67
USB1-213ENST00000566292 DOT1LQ8TEK3 1739 aa25.48■■□□□ 1.67
USB1-213ENST00000566292 NBPF6Q5VWK0 638 aa25.47■■□□□ 1.67
USB1-213ENST00000566292 NBPF4Q96M43 638 aa25.47■■□□□ 1.67
USB1-213ENST00000566292 PDGFDQ9GZP0 370 aaPredicted RBP25.47■■□□□ 1.67
USB1-213ENST00000566292 SPON1Q9HCB6 807 aa25.47■■□□□ 1.67
USB1-213ENST00000566292 PAPPAQ13219 1627 aa25.47■■□□□ 1.67
USB1-213ENST00000566292 HSP90AB2PQ58FF8 381 aa25.45■■□□□ 1.66
USB1-213ENST00000566292 ANKRD26Q9UPS8 1709 aa25.45■■□□□ 1.66
USB1-213ENST00000566292 INSRP06213 1382 aa25.44■■□□□ 1.66
USB1-213ENST00000566292 FLT4P35916 1363 aa25.44■■□□□ 1.66
USB1-213ENST00000566292 MAP2P11137 1827 aaKnown RBP25.44■■□□□ 1.66
USB1-213ENST00000566292 USHBP1Q8N6Y0 703 aa25.44■■□□□ 1.66
USB1-213ENST00000566292 CCER1Q8TC90 406 aaPredicted RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms