RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 MON2Q7Z3U7 1717 aa21.44■■□□□ 1.02
CMTM3-212ENST00000566121 CAMKK2Q96RR4 588 aa21.44■■□□□ 1.02
CMTM3-212ENST00000566121 CARD10Q9BWT7 1032 aa21.44■■□□□ 1.02
CMTM3-212ENST00000566121 USP35Q9P2H5 1018 aa21.44■■□□□ 1.02
CMTM3-212ENST00000566121 BCL9O00512 1426 aa21.44■■□□□ 1.02
CMTM3-212ENST00000566121 EDC4Q6P2E9 1401 aaKnown RBP21.44■■□□□ 1.02
CMTM3-212ENST00000566121 NFAT5O94916 1531 aa21.44■■□□□ 1.02
CMTM3-212ENST00000566121 PARP4Q9UKK3 1724 aaKnown RBP21.43■■□□□ 1.02
CMTM3-212ENST00000566121 SLC12A5Q9H2X9 1139 aa21.43■■□□□ 1.02
CMTM3-212ENST00000566121 ST20-MTHFSA0A0A6YYL1 179 aa21.42■■□□□ 1.02
CMTM3-212ENST00000566121 EN1Q05925 392 aaPredicted RBP21.42■■□□□ 1.02
CMTM3-212ENST00000566121 FAM182BQ5T319 152 aa21.42■■□□□ 1.02
CMTM3-212ENST00000566121 TOM1L2Q6ZVM7 507 aa21.4■■□□□ 1.02
CMTM3-212ENST00000566121 TNS1Q9HBL0 1735 aaKnown RBP21.39■■□□□ 1.01
CMTM3-212ENST00000566121 TRIM37O94972 964 aa21.39■■□□□ 1.01
CMTM3-212ENST00000566121 TMC1Q8TDI8 760 aa21.39■■□□□ 1.01
CMTM3-212ENST00000566121 CCDC7Q96M83 1385 aa21.38■■□□□ 1.01
CMTM3-212ENST00000566121 DDB1Q16531 1140 aa21.37■■□□□ 1.01
CMTM3-212ENST00000566121 OVOS2A0A0G2JMS6 1433 aa21.37■■□□□ 1.01
CMTM3-212ENST00000566121 OVOS2A0A0J9YW53 1432 aa21.37■■□□□ 1.01
CMTM3-212ENST00000566121 OVOS2Q6IE36 1432 aa21.37■■□□□ 1.01
CMTM3-212ENST00000566121 A0A1W2PP64 1363 aa21.36■■□□□ 1.01
CMTM3-212ENST00000566121 APBA3O96018 575 aa21.36■■□□□ 1.01
CMTM3-212ENST00000566121 PLSCR1O15162 318 aa21.35■■□□□ 1.01
CMTM3-212ENST00000566121 EZH2Q15910 746 aaKnown RBP21.35■■□□□ 1.01
CMTM3-212ENST00000566121 NME9Q86XW9 330 aa21.35■■□□□ 1.01
CMTM3-212ENST00000566121 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.35■■□□□ 1.01
CMTM3-212ENST00000566121 ERBB3P21860 1342 aa21.33■■□□□ 1.01
CMTM3-212ENST00000566121 PEAK1Q9H792 1746 aa21.33■■□□□ 1.01
CMTM3-212ENST00000566121 CDCA8Q53HL2 280 aa21.33■■□□□ 1.01
CMTM3-212ENST00000566121 ZBTB7CA1YPR0 619 aa21.32■■□□□ 1
CMTM3-212ENST00000566121 TMF1P82094 1093 aa21.32■■□□□ 1
CMTM3-212ENST00000566121 BCL11BQ9C0K0 894 aaPredicted RBP21.32■■□□□ 1
CMTM3-212ENST00000566121 LRP5O75197 1615 aa21.31■■□□□ 1
CMTM3-212ENST00000566121 ANKRD36BQ8N2N9 1353 aa21.31■■□□□ 1
CMTM3-212ENST00000566121 EXOC5O00471 708 aa21.3■■□□□ 1
CMTM3-212ENST00000566121 CSB-PGBD3P0DP91 1061 aa21.3■■□□□ 1
CMTM3-212ENST00000566121 IP6K1Q92551 441 aa21.3■■□□□ 1
CMTM3-212ENST00000566121 USP47Q96K76 1375 aa21.3■■□□□ 1
CMTM3-212ENST00000566121 MARCH10Q8NA82 808 aaPredicted RBP21.29■■□□□ 1
CMTM3-212ENST00000566121 LRRC37A3O60309 1634 aa21.29■■□□□ 1
CMTM3-212ENST00000566121 NBPF14Q5TI25 921 aa21.27■■□□□ 1
CMTM3-212ENST00000566121 RGPD3A6NKT7 1758 aaPredicted RBP21.27■■□□□ 1
CMTM3-212ENST00000566121 RGPD4Q7Z3J3 1758 aa21.27■■□□□ 1
CMTM3-212ENST00000566121 RGPD5Q99666 1765 aa21.26■□□□□ 0.99
CMTM3-212ENST00000566121 SOX12O15370 315 aa21.26■□□□□ 0.99
CMTM3-212ENST00000566121 COG3Q96JB2 828 aa21.26■□□□□ 0.99
CMTM3-212ENST00000566121 WNK3Q9BYP7 1800 aa21.26■□□□□ 0.99
CMTM3-212ENST00000566121 RREB1Q92766 1687 aa21.25■□□□□ 0.99
CMTM3-212ENST00000566121 R3HDM1Q15032 1099 aaKnown RBP21.24■□□□□ 0.99
CMTM3-212ENST00000566121 ANKRD24Q8TF21 1146 aa21.24■□□□□ 0.99
CMTM3-212ENST00000566121 SBF2Q86WG5 1849 aa21.24■□□□□ 0.99
CMTM3-212ENST00000566121 TNS2Q63HR2 1409 aa21.23■□□□□ 0.99
CMTM3-212ENST00000566121 PSDA5PKW4 1024 aaPredicted RBP21.23■□□□□ 0.99
CMTM3-212ENST00000566121 IL2RBP14784 551 aa21.23■□□□□ 0.99
CMTM3-212ENST00000566121 FYB1O15117 783 aa21.22■□□□□ 0.99
CMTM3-212ENST00000566121 NLRP2Q9NX02 1062 aa21.22■□□□□ 0.99
CMTM3-212ENST00000566121 KIF24Q5T7B8 1368 aa21.21■□□□□ 0.99
CMTM3-212ENST00000566121 LTN1O94822 1766 aa21.2■□□□□ 0.99
CMTM3-212ENST00000566121 RTL1A6NKG5 1358 aa21.2■□□□□ 0.98
CMTM3-212ENST00000566121 MAP3K19Q56UN5 1328 aa21.19■□□□□ 0.98
CMTM3-212ENST00000566121 HOXC9P31274 260 aa21.18■□□□□ 0.98
CMTM3-212ENST00000566121 PROM2Q8N271 834 aa21.18■□□□□ 0.98
CMTM3-212ENST00000566121 NUP188Q5SRE5 1749 aa21.18■□□□□ 0.98
CMTM3-212ENST00000566121 FAM208AQ9UK61 1670 aaKnown RBP21.16■□□□□ 0.98
CMTM3-212ENST00000566121 CGNL1Q0VF96 1302 aa21.14■□□□□ 0.97
CMTM3-212ENST00000566121 AMPHP49418 695 aa21.14■□□□□ 0.97
CMTM3-212ENST00000566121 PTF1AQ7RTS3 328 aa21.13■□□□□ 0.97
CMTM3-212ENST00000566121 TXNRD1Q16881 649 aa21.11■□□□□ 0.97
CMTM3-212ENST00000566121 CARD14Q9BXL6 1004 aa21.11■□□□□ 0.97
CMTM3-212ENST00000566121 PCGF6Q9BYE7 350 aa21.11■□□□□ 0.97
CMTM3-212ENST00000566121 GGNBP2Q9H3C7 697 aa21.1■□□□□ 0.97
CMTM3-212ENST00000566121 INSRP06213 1382 aa21.1■□□□□ 0.97
CMTM3-212ENST00000566121 KCNQ2O43526 872 aa21.09■□□□□ 0.97
CMTM3-212ENST00000566121 NHSQ6T4R5 1651 aa21.09■□□□□ 0.97
CMTM3-212ENST00000566121 SPON1Q9HCB6 807 aa21.08■□□□□ 0.97
CMTM3-212ENST00000566121 FLT4P35916 1363 aa21.07■□□□□ 0.96
CMTM3-212ENST00000566121 FBLN1P23142 703 aa21.06■□□□□ 0.96
CMTM3-212ENST00000566121 EIF4G2P78344 907 aaKnown RBP eCLIP21.05■□□□□ 0.96
CMTM3-212ENST00000566121 RRS1Q15050 365 aaKnown RBP21.05■□□□□ 0.96
CMTM3-212ENST00000566121 SLC15A2Q16348 729 aa21.05■□□□□ 0.96
CMTM3-212ENST00000566121 NBPF6Q5VWK0 638 aa21.05■□□□□ 0.96
CMTM3-212ENST00000566121 ZCRB1Q8TBF4 217 aaKnown RBP21.05■□□□□ 0.96
CMTM3-212ENST00000566121 NBPF4Q96M43 638 aa21.05■□□□□ 0.96
CMTM3-212ENST00000566121 ANO8Q9HCE9 1232 aaPredicted RBP21.05■□□□□ 0.96
CMTM3-212ENST00000566121 LTV1Q96GA3 475 aaPredicted RBP21.04■□□□□ 0.96
CMTM3-212ENST00000566121 SMG6Q86US8 1419 aaKnown RBP21.04■□□□□ 0.96
CMTM3-212ENST00000566121 SLC27A3Q5K4L6 730 aa21.03■□□□□ 0.96
CMTM3-212ENST00000566121 STK32BQ9NY57 414 aa21.03■□□□□ 0.96
CMTM3-212ENST00000566121 NSD3Q9BZ95 1437 aa21.03■□□□□ 0.96
CMTM3-212ENST00000566121 MYOM1P52179 1685 aa21.02■□□□□ 0.96
CMTM3-212ENST00000566121 HMGB2P26583 209 aaKnown RBP21.02■□□□□ 0.96
CMTM3-212ENST00000566121 WASHC2AQ641Q2 1341 aa21.02■□□□□ 0.95
CMTM3-212ENST00000566121 HSP90AB2PQ58FF8 381 aa21.01■□□□□ 0.95
CMTM3-212ENST00000566121 ACSBG1Q96GR2 724 aa21.01■□□□□ 0.95
CMTM3-212ENST00000566121 NCAPD2Q15021 1401 aa21.01■□□□□ 0.95
CMTM3-212ENST00000566121 NSD2O96028 1365 aa21■□□□□ 0.95
CMTM3-212ENST00000566121 PLEKHG2Q9H7P9 1386 aa21■□□□□ 0.95
CMTM3-212ENST00000566121 KIF20BQ96Q89 1820 aa21■□□□□ 0.95
CMTM3-212ENST00000566121 DDX54Q8TDD1 881 aaKnown RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms