RNA–Protein interactions for RNA: ENST00000565684.5

KIFC3-223, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-223	ENST00000565684	NME9	Q86XW9	330 aa		31.92	■■■□□ 2.7
KIFC3-223	ENST00000565684	AXIN2	Q9Y2T1	843 aa		31.92	■■■□□ 2.7
KIFC3-223	ENST00000565684	ABCC6	O95255	1503 aa		31.91	■■■□□ 2.7
KIFC3-223	ENST00000565684	DEFB132	Q7Z7B7	95 aa		31.91	■■■□□ 2.7
KIFC3-223	ENST00000565684	NINL	Q9Y2I6	1382 aa		31.91	■■■□□ 2.7
KIFC3-223	ENST00000565684	SOX12	O15370	315 aa		31.9	■■■□□ 2.7
KIFC3-223	ENST00000565684	TCP11L2	Q8N4U5	519 aa		31.9	■■■□□ 2.7
KIFC3-223	ENST00000565684	LRRC37A3	O60309	1634 aa		31.89	■■■□□ 2.7
KIFC3-223	ENST00000565684	TERF2IP	Q9NYB0	399 aa		31.88	■■■□□ 2.69
KIFC3-223	ENST00000565684	THRAP3	Q9Y2W1	955 aa	Known RBP	31.88	■■■□□ 2.69
KIFC3-223	ENST00000565684	OVOS2	A0A0J9YW53	1432 aa		31.88	■■■□□ 2.69
KIFC3-223	ENST00000565684	OVOS2	Q6IE36	1432 aa		31.88	■■■□□ 2.69
KIFC3-223	ENST00000565684	SLC24A1	O60721	1099 aa		31.86	■■■□□ 2.69
KIFC3-223	ENST00000565684	MYOM1	P52179	1685 aa		31.85	■■■□□ 2.69
KIFC3-223	ENST00000565684	WDR17	Q8IZU2	1322 aa		31.84	■■■□□ 2.69
KIFC3-223	ENST00000565684	SF3B2	Q13435	895 aa	Known RBP	31.84	■■■□□ 2.69
KIFC3-223	ENST00000565684	PEAK1	Q9H792	1746 aa		31.83	■■■□□ 2.69
KIFC3-223	ENST00000565684	TMF1	P82094	1093 aa		31.81	■■■□□ 2.68
KIFC3-223	ENST00000565684	SRCAP	Q6ZRS2	3230 aa		31.81	■■■□□ 2.68
KIFC3-223	ENST00000565684	ANKRD36B	Q8N2N9	1353 aa		31.81	■■■□□ 2.68
KIFC3-223	ENST00000565684	TOM1L2	Q6ZVM7	507 aa		31.79	■■■□□ 2.68
KIFC3-223	ENST00000565684	DISP2	A7MBM2	1401 aa		31.78	■■■□□ 2.68
KIFC3-223	ENST00000565684	PDE3B	Q13370	1112 aa		31.76	■■■□□ 2.67
KIFC3-223	ENST00000565684	FAM196A	Q6ZSG2	479 aa		31.76	■■■□□ 2.67
KIFC3-223	ENST00000565684	SBF2	Q86WG5	1849 aa		31.76	■■■□□ 2.67
KIFC3-223	ENST00000565684	BAG6	P46379	1132 aa		31.75	■■■□□ 2.67
KIFC3-223	ENST00000565684	KIF20B	Q96Q89	1820 aa		31.75	■■■□□ 2.67
KIFC3-223	ENST00000565684	CCER1	Q8TC90	406 aa	Predicted RBP	31.74	■■■□□ 2.67
KIFC3-223	ENST00000565684	CARD10	Q9BWT7	1032 aa		31.72	■■■□□ 2.67
KIFC3-223	ENST00000565684	TRIM37	O94972	964 aa		31.71	■■■□□ 2.67
KIFC3-223	ENST00000565684	EN1	Q05925	392 aa	Predicted RBP	31.7	■■■□□ 2.67
KIFC3-223	ENST00000565684	ERBB3	P21860	1342 aa		31.7	■■■□□ 2.66
KIFC3-223	ENST00000565684	RREB1	Q92766	1687 aa		31.7	■■■□□ 2.66
KIFC3-223	ENST00000565684	CSB-PGBD3	P0DP91	1061 aa		31.69	■■■□□ 2.66
KIFC3-223	ENST00000565684	FAM208A	Q9UK61	1670 aa	Known RBP	31.68	■■■□□ 2.66
KIFC3-223	ENST00000565684	OVOS2	A0A0G2JMS6	1433 aa		31.67	■■■□□ 2.66
KIFC3-223	ENST00000565684	CCDC7	Q96M83	1385 aa		31.67	■■■□□ 2.66
KIFC3-223	ENST00000565684	CDCA8	Q53HL2	280 aa		31.66	■■■□□ 2.66
KIFC3-223	ENST00000565684	DDB1	Q16531	1140 aa		31.65	■■■□□ 2.66
KIFC3-223	ENST00000565684	COG3	Q96JB2	828 aa		31.64	■■■□□ 2.66
KIFC3-223	ENST00000565684	NUP188	Q5SRE5	1749 aa		31.63	■■■□□ 2.65
KIFC3-223	ENST00000565684	CDCA7	Q9BWT1	371 aa	Predicted RBP	31.63	■■■□□ 2.65
KIFC3-223	ENST00000565684	RGPD2	P0DJD1	1756 aa		31.61	■■■□□ 2.65
KIFC3-223	ENST00000565684	FYB1	O15117	783 aa		31.61	■■■□□ 2.65
KIFC3-223	ENST00000565684	EZH2	Q15910	746 aa	Known RBP	31.61	■■■□□ 2.65
KIFC3-223	ENST00000565684	ANKRD24	Q8TF21	1146 aa		31.61	■■■□□ 2.65
KIFC3-223	ENST00000565684	CAMKK2	Q96RR4	588 aa		31.61	■■■□□ 2.65
KIFC3-223	ENST00000565684	RGPD3	A6NKT7	1758 aa	Predicted RBP	31.61	■■■□□ 2.65
KIFC3-223	ENST00000565684	RGPD4	Q7Z3J3	1758 aa		31.61	■■■□□ 2.65
KIFC3-223	ENST00000565684	TNS2	Q63HR2	1409 aa		31.6	■■■□□ 2.65
KIFC3-223	ENST00000565684	FBLN1	P23142	703 aa		31.6	■■■□□ 2.65
KIFC3-223	ENST00000565684	MAP3K19	Q56UN5	1328 aa		31.59	■■■□□ 2.65
KIFC3-223	ENST00000565684	APBA3	O96018	575 aa		31.59	■■■□□ 2.65
KIFC3-223	ENST00000565684	MARCH10	Q8NA82	808 aa	Predicted RBP	31.59	■■■□□ 2.65
KIFC3-223	ENST00000565684	IP6K1	Q92551	441 aa		31.59	■■■□□ 2.65
KIFC3-223	ENST00000565684	CARD14	Q9BXL6	1004 aa		31.58	■■■□□ 2.65
KIFC3-223	ENST00000565684	GGNBP2	Q9H3C7	697 aa		31.58	■■■□□ 2.65
KIFC3-223	ENST00000565684	BCL9	O00512	1426 aa		31.58	■■■□□ 2.65
KIFC3-223	ENST00000565684	PARD3	Q8TEW0	1356 aa		31.56	■■■□□ 2.64
KIFC3-223	ENST00000565684	NLRP2	Q9NX02	1062 aa		31.56	■■■□□ 2.64
KIFC3-223	ENST00000565684	C11orf95	C9JLR9	678 aa	Predicted RBP	31.55	■■■□□ 2.64
KIFC3-223	ENST00000565684	NSD3	Q9BZ95	1437 aa		31.55	■■■□□ 2.64
KIFC3-223	ENST00000565684	HOXC9	P31274	260 aa		31.53	■■■□□ 2.64
KIFC3-223	ENST00000565684	LRP5	O75197	1615 aa		31.53	■■■□□ 2.64
KIFC3-223	ENST00000565684	PSD	A5PKW4	1024 aa	Predicted RBP	31.52	■■■□□ 2.64
KIFC3-223	ENST00000565684	HSPA5	P11021	654 aa	Known RBP	31.52	■■■□□ 2.64
KIFC3-223	ENST00000565684	RTL1	A6NKG5	1358 aa		31.52	■■■□□ 2.64
KIFC3-223	ENST00000565684	EIF4G2	P78344	907 aa	Known RBP eCLIP	31.51	■■■□□ 2.63
KIFC3-223	ENST00000565684	PTF1A	Q7RTS3	328 aa		31.51	■■■□□ 2.63
KIFC3-223	ENST00000565684	NHS	Q6T4R5	1651 aa		31.51	■■■□□ 2.63
KIFC3-223	ENST00000565684	EXOC5	O00471	708 aa		31.5	■■■□□ 2.63
KIFC3-223	ENST00000565684	ANKRD26	Q9UPS8	1709 aa		31.49	■■■□□ 2.63
KIFC3-223	ENST00000565684	RRS1	Q15050	365 aa	Known RBP	31.49	■■■□□ 2.63
KIFC3-223	ENST00000565684	IL2RB	P14784	551 aa		31.48	■■■□□ 2.63
KIFC3-223	ENST00000565684	LTV1	Q96GA3	475 aa	Predicted RBP	31.48	■■■□□ 2.63
KIFC3-223	ENST00000565684	SHANK3	Q9BYB0	1731 aa		31.48	■■■□□ 2.63
KIFC3-223	ENST00000565684	AMPH	P49418	695 aa		31.47	■■■□□ 2.63
KIFC3-223	ENST00000565684	BCL11B	Q9C0K0	894 aa	Predicted RBP	31.45	■■■□□ 2.63
KIFC3-223	ENST00000565684	R3HDM1	Q15032	1099 aa	Known RBP	31.44	■■■□□ 2.62
KIFC3-223	ENST00000565684	MAP2	P11137	1827 aa	Known RBP	31.41	■■■□□ 2.62
KIFC3-223	ENST00000565684	PLSCR1	O15162	318 aa		31.4	■■■□□ 2.62
KIFC3-223	ENST00000565684	POLR3GL	Q9BT43	218 aa		31.4	■■■□□ 2.62
KIFC3-223	ENST00000565684	BTAF1	O14981	1849 aa		31.39	■■■□□ 2.62
KIFC3-223	ENST00000565684	MEGF6	O75095	1541 aa		31.39	■■■□□ 2.61
KIFC3-223	ENST00000565684	INSR	P06213	1382 aa		31.38	■■■□□ 2.61
KIFC3-223	ENST00000565684	FLT4	P35916	1363 aa		31.38	■■■□□ 2.61
KIFC3-223	ENST00000565684	KIF24	Q5T7B8	1368 aa		31.38	■■■□□ 2.61
KIFC3-223	ENST00000565684	CGNL1	Q0VF96	1302 aa		31.35	■■■□□ 2.61
KIFC3-223	ENST00000565684	KCNQ2	O43526	872 aa		31.35	■■■□□ 2.61
KIFC3-223	ENST00000565684	HSP90AB2P	Q58FF8	381 aa		31.35	■■■□□ 2.61
KIFC3-223	ENST00000565684	DOT1L	Q8TEK3	1739 aa		31.35	■■■□□ 2.61
KIFC3-223	ENST00000565684	SMG6	Q86US8	1419 aa	Known RBP	31.34	■■■□□ 2.61
KIFC3-223	ENST00000565684	NBPF6	Q5VWK0	638 aa		31.34	■■■□□ 2.61
KIFC3-223	ENST00000565684	NBPF4	Q96M43	638 aa		31.34	■■■□□ 2.61
KIFC3-223	ENST00000565684	EMILIN1	Q9Y6C2	1016 aa		31.33	■■■□□ 2.61
KIFC3-223	ENST00000565684	PROM2	Q8N271	834 aa		31.32	■■■□□ 2.6
KIFC3-223	ENST00000565684	ACSBG1	Q96GR2	724 aa		31.31	■■■□□ 2.6
KIFC3-223	ENST00000565684	USHBP1	Q8N6Y0	703 aa		31.3	■■■□□ 2.6
KIFC3-223	ENST00000565684	KAT6B	Q8WYB5	2073 aa		31.29	■■■□□ 2.6
KIFC3-223	ENST00000565684	NBPF14	Q5TI25	921 aa		31.28	■■■□□ 2.6

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms