RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 CDCA7Q9BWT1 371 aaPredicted RBP23.41■■□□□ 1.34
USB1-211ENST00000565662 WDR17Q8IZU2 1322 aa23.39■■□□□ 1.34
USB1-211ENST00000565662 BAG6P46379 1132 aa23.39■■□□□ 1.33
USB1-211ENST00000565662 CCER1Q8TC90 406 aaPredicted RBP23.39■■□□□ 1.33
USB1-211ENST00000565662 SLC12A5Q9H2X9 1139 aa23.39■■□□□ 1.33
USB1-211ENST00000565662 PDE3BQ13370 1112 aa23.38■■□□□ 1.33
USB1-211ENST00000565662 LARP1Q6PKG0 1096 aaKnown RBP23.38■■□□□ 1.33
USB1-211ENST00000565662 FAM196AQ6ZSG2 479 aa23.38■■□□□ 1.33
USB1-211ENST00000565662 WNK3Q9BYP7 1800 aa23.38■■□□□ 1.33
USB1-211ENST00000565662 OVOS2A0A0J9YW53 1432 aa23.37■■□□□ 1.33
USB1-211ENST00000565662 OVOS2Q6IE36 1432 aa23.37■■□□□ 1.33
USB1-211ENST00000565662 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.37■■□□□ 1.33
USB1-211ENST00000565662 ZRANB1Q9UGI0 708 aa23.37■■□□□ 1.33
USB1-211ENST00000565662 DISP2A7MBM2 1401 aa23.36■■□□□ 1.33
USB1-211ENST00000565662 ZBTB7CA1YPR0 619 aa23.36■■□□□ 1.33
USB1-211ENST00000565662 USP35Q9P2H5 1018 aa23.36■■□□□ 1.33
USB1-211ENST00000565662 LTN1O94822 1766 aa23.36■■□□□ 1.33
USB1-211ENST00000565662 CCDC7Q96M83 1385 aa23.36■■□□□ 1.33
USB1-211ENST00000565662 TOM1L2Q6ZVM7 507 aa23.35■■□□□ 1.33
USB1-211ENST00000565662 FAM208AQ9UK61 1670 aaKnown RBP23.35■■□□□ 1.33
USB1-211ENST00000565662 PARD3Q8TEW0 1356 aa23.33■■□□□ 1.33
USB1-211ENST00000565662 COG3Q96JB2 828 aa23.32■■□□□ 1.32
USB1-211ENST00000565662 TNS1Q9HBL0 1735 aaKnown RBP23.32■■□□□ 1.32
USB1-211ENST00000565662 CSB-PGBD3P0DP91 1061 aa23.31■■□□□ 1.32
USB1-211ENST00000565662 NME9Q86XW9 330 aa23.31■■□□□ 1.32
USB1-211ENST00000565662 CARD10Q9BWT7 1032 aa23.31■■□□□ 1.32
USB1-211ENST00000565662 RGPD5Q99666 1765 aa23.31■■□□□ 1.32
USB1-211ENST00000565662 OVOS2A0A0G2JMS6 1433 aa23.31■■□□□ 1.32
USB1-211ENST00000565662 LRRC37A3O60309 1634 aa23.3■■□□□ 1.32
USB1-211ENST00000565662 SOX12O15370 315 aa23.28■■□□□ 1.32
USB1-211ENST00000565662 KIF20BQ96Q89 1820 aa23.28■■□□□ 1.32
USB1-211ENST00000565662 ERBB3P21860 1342 aa23.28■■□□□ 1.32
USB1-211ENST00000565662 RTL1A6NKG5 1358 aa23.27■■□□□ 1.32
USB1-211ENST00000565662 DDB1Q16531 1140 aa23.27■■□□□ 1.32
USB1-211ENST00000565662 MYOM1P52179 1685 aa23.26■■□□□ 1.31
USB1-211ENST00000565662 AXIN2Q9Y2T1 843 aa23.26■■□□□ 1.31
USB1-211ENST00000565662 BCL9O00512 1426 aa23.25■■□□□ 1.31
USB1-211ENST00000565662 EIF4G2P78344 907 aaKnown RBP eCLIP23.25■■□□□ 1.31
USB1-211ENST00000565662 RGPD3A6NKT7 1758 aaPredicted RBP23.24■■□□□ 1.31
USB1-211ENST00000565662 RGPD4Q7Z3J3 1758 aa23.24■■□□□ 1.31
USB1-211ENST00000565662 KIF24Q5T7B8 1368 aa23.24■■□□□ 1.31
USB1-211ENST00000565662 TNS2Q63HR2 1409 aa23.22■■□□□ 1.31
USB1-211ENST00000565662 PEAK1Q9H792 1746 aa23.22■■□□□ 1.31
USB1-211ENST00000565662 DEFB132Q7Z7B7 95 aa23.21■■□□□ 1.31
USB1-211ENST00000565662 IP6K1Q92551 441 aa23.21■■□□□ 1.31
USB1-211ENST00000565662 SMG6Q86US8 1419 aaKnown RBP23.2■■□□□ 1.3
USB1-211ENST00000565662 EXOC5O00471 708 aa23.18■■□□□ 1.3
USB1-211ENST00000565662 TRIM37O94972 964 aa23.18■■□□□ 1.3
USB1-211ENST00000565662 ANKRD24Q8TF21 1146 aa23.18■■□□□ 1.3
USB1-211ENST00000565662 NLRP2Q9NX02 1062 aa23.17■■□□□ 1.3
USB1-211ENST00000565662 SBF2Q86WG5 1849 aa23.17■■□□□ 1.3
USB1-211ENST00000565662 RREB1Q92766 1687 aa23.16■■□□□ 1.3
USB1-211ENST00000565662 AMPHP49418 695 aa23.16■■□□□ 1.3
USB1-211ENST00000565662 FAM182BQ5T319 152 aa23.16■■□□□ 1.3
USB1-211ENST00000565662 CGNL1Q0VF96 1302 aa23.15■■□□□ 1.3
USB1-211ENST00000565662 FYB1O15117 783 aa23.15■■□□□ 1.3
USB1-211ENST00000565662 APBA3O96018 575 aa23.15■■□□□ 1.3
USB1-211ENST00000565662 IL2RBP14784 551 aa23.15■■□□□ 1.3
USB1-211ENST00000565662 NSD3Q9BZ95 1437 aa23.15■■□□□ 1.3
USB1-211ENST00000565662 MAP3K19Q56UN5 1328 aa23.13■■□□□ 1.29
USB1-211ENST00000565662 EN1Q05925 392 aaPredicted RBP23.13■■□□□ 1.29
USB1-211ENST00000565662 HOXC9P31274 260 aa23.12■■□□□ 1.29
USB1-211ENST00000565662 FLT4P35916 1363 aa23.12■■□□□ 1.29
USB1-211ENST00000565662 ANKRD26Q9UPS8 1709 aa23.11■■□□□ 1.29
USB1-211ENST00000565662 BCL11BQ9C0K0 894 aaPredicted RBP23.11■■□□□ 1.29
USB1-211ENST00000565662 LRP5O75197 1615 aa23.11■■□□□ 1.29
USB1-211ENST00000565662 CAMKK2Q96RR4 588 aa23.1■■□□□ 1.29
USB1-211ENST00000565662 GGNBP2Q9H3C7 697 aa23.1■■□□□ 1.29
USB1-211ENST00000565662 PLSCR1O15162 318 aa23.09■■□□□ 1.29
USB1-211ENST00000565662 NSD2O96028 1365 aa23.09■■□□□ 1.29
USB1-211ENST00000565662 NHSQ6T4R5 1651 aa23.09■■□□□ 1.29
USB1-211ENST00000565662 HSPA5P11021 654 aaKnown RBP23.08■■□□□ 1.29
USB1-211ENST00000565662 NBPF14Q5TI25 921 aa23.08■■□□□ 1.29
USB1-211ENST00000565662 INSRP06213 1382 aa23.08■■□□□ 1.29
USB1-211ENST00000565662 NUP188Q5SRE5 1749 aa23.08■■□□□ 1.28
USB1-211ENST00000565662 EZH2Q15910 746 aaKnown RBP23.06■■□□□ 1.28
USB1-211ENST00000565662 MARCH10Q8NA82 808 aaPredicted RBP23.06■■□□□ 1.28
USB1-211ENST00000565662 CARD14Q9BXL6 1004 aa23.03■■□□□ 1.28
USB1-211ENST00000565662 POLR3GLQ9BT43 218 aa23.02■■□□□ 1.28
USB1-211ENST00000565662 PLEKHG2Q9H7P9 1386 aa23.01■■□□□ 1.27
USB1-211ENST00000565662 RRS1Q15050 365 aaKnown RBP23.01■■□□□ 1.27
USB1-211ENST00000565662 LTV1Q96GA3 475 aaPredicted RBP23■■□□□ 1.27
USB1-211ENST00000565662 HMGB2P26583 209 aaKnown RBP22.99■■□□□ 1.27
USB1-211ENST00000565662 RAPGEF4Q8WZA2 1011 aa22.99■■□□□ 1.27
USB1-211ENST00000565662 MAP2P11137 1827 aaKnown RBP22.98■■□□□ 1.27
USB1-211ENST00000565662 RGPD2P0DJD1 1756 aa22.97■■□□□ 1.27
USB1-211ENST00000565662 R3HDM1Q15032 1099 aaKnown RBP22.95■■□□□ 1.26
USB1-211ENST00000565662 WASHC2AQ641Q2 1341 aa22.95■■□□□ 1.26
USB1-211ENST00000565662 ZCRB1Q8TBF4 217 aaKnown RBP22.95■■□□□ 1.26
USB1-211ENST00000565662 TATP17735 454 aaPredicted RBP22.94■■□□□ 1.26
USB1-211ENST00000565662 BTAF1O14981 1849 aa22.94■■□□□ 1.26
USB1-211ENST00000565662 NCAPD2Q15021 1401 aa22.93■■□□□ 1.26
USB1-211ENST00000565662 PCDH11XQ9BZA7 1347 aa22.93■■□□□ 1.26
USB1-211ENST00000565662 PCDH11YQ9BZA8 1340 aa22.93■■□□□ 1.26
USB1-211ENST00000565662 PANK3Q9H999 370 aa22.93■■□□□ 1.26
USB1-211ENST00000565662 KNSTRNQ9Y448 316 aa22.93■■□□□ 1.26
USB1-211ENST00000565662 SHANK3Q9BYB0 1731 aa22.93■■□□□ 1.26
USB1-211ENST00000565662 MEGF6O75095 1541 aa22.92■■□□□ 1.26
USB1-211ENST00000565662 PSDA5PKW4 1024 aaPredicted RBP22.92■■□□□ 1.26
USB1-211ENST00000565662 HSP90AB2PQ58FF8 381 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms