RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.81■■□□□ 1.88
SPSB3-207ENST00000565550 COL18A1P39060 1754 aa26.81■■□□□ 1.88
SPSB3-207ENST00000565550 AKAP12Q02952 1782 aa26.8■■□□□ 1.88
SPSB3-207ENST00000565550 C11orf95C9JLR9 678 aaPredicted RBP26.8■■□□□ 1.88
SPSB3-207ENST00000565550 PARP4Q9UKK3 1724 aaKnown RBP26.79■■□□□ 1.88
SPSB3-207ENST00000565550 CSB-PGBD3P0DP91 1061 aa26.79■■□□□ 1.88
SPSB3-207ENST00000565550 TMC1Q8TDI8 760 aa26.79■■□□□ 1.88
SPSB3-207ENST00000565550 CCER1Q8TC90 406 aaPredicted RBP26.78■■□□□ 1.88
SPSB3-207ENST00000565550 OVOS2A0A0G2JMS6 1433 aa26.76■■□□□ 1.87
SPSB3-207ENST00000565550 OVOS2A0A0J9YW53 1432 aa26.76■■□□□ 1.87
SPSB3-207ENST00000565550 OVOS2Q6IE36 1432 aa26.76■■□□□ 1.87
SPSB3-207ENST00000565550 CARD10Q9BWT7 1032 aa26.76■■□□□ 1.87
SPSB3-207ENST00000565550 SLC12A5Q9H2X9 1139 aa26.76■■□□□ 1.87
SPSB3-207ENST00000565550 NME9Q86XW9 330 aa26.75■■□□□ 1.87
SPSB3-207ENST00000565550 CDCA7Q9BWT1 371 aaPredicted RBP26.75■■□□□ 1.87
SPSB3-207ENST00000565550 NBPF14Q5TI25 921 aa26.74■■□□□ 1.87
SPSB3-207ENST00000565550 HDGFL2Q7Z4V5 671 aaPredicted RBP26.74■■□□□ 1.87
SPSB3-207ENST00000565550 CD163L1Q9NR16 1453 aa26.74■■□□□ 1.87
SPSB3-207ENST00000565550 USP31Q70CQ4 1352 aa26.73■■□□□ 1.87
SPSB3-207ENST00000565550 NFAT5O94916 1531 aa26.73■■□□□ 1.87
SPSB3-207ENST00000565550 MARCH10Q8NA82 808 aaPredicted RBP26.72■■□□□ 1.87
SPSB3-207ENST00000565550 LRRC37A3O60309 1634 aa26.71■■□□□ 1.87
SPSB3-207ENST00000565550 CLSPNQ9HAW4 1339 aa26.7■■□□□ 1.87
SPSB3-207ENST00000565550 PTF1AQ7RTS3 328 aa26.7■■□□□ 1.86
SPSB3-207ENST00000565550 MON2Q7Z3U7 1717 aa26.7■■□□□ 1.86
SPSB3-207ENST00000565550 PEAK1Q9H792 1746 aa26.7■■□□□ 1.86
SPSB3-207ENST00000565550 PUS7Q96PZ0 661 aaKnown RBP26.69■■□□□ 1.86
SPSB3-207ENST00000565550 BCL11BQ9C0K0 894 aaPredicted RBP26.69■■□□□ 1.86
SPSB3-207ENST00000565550 TERF2IPQ9NYB0 399 aa26.69■■□□□ 1.86
SPSB3-207ENST00000565550 RREB1Q92766 1687 aa26.69■■□□□ 1.86
SPSB3-207ENST00000565550 RGPD5Q99666 1765 aa26.69■■□□□ 1.86
SPSB3-207ENST00000565550 EXOC5O00471 708 aa26.68■■□□□ 1.86
SPSB3-207ENST00000565550 PLSCR1O15162 318 aa26.68■■□□□ 1.86
SPSB3-207ENST00000565550 CCDC7Q96M83 1385 aa26.66■■□□□ 1.86
SPSB3-207ENST00000565550 NUP188Q5SRE5 1749 aa26.65■■□□□ 1.86
SPSB3-207ENST00000565550 ST20-MTHFSA0A0A6YYL1 179 aa26.65■■□□□ 1.86
SPSB3-207ENST00000565550 TESK2Q96S53 571 aa26.65■■□□□ 1.86
SPSB3-207ENST00000565550 A0A1W2PP64 1363 aa26.65■■□□□ 1.86
SPSB3-207ENST00000565550 EDC4Q6P2E9 1401 aaKnown RBP26.65■■□□□ 1.86
SPSB3-207ENST00000565550 NLRP2Q9NX02 1062 aa26.63■■□□□ 1.85
SPSB3-207ENST00000565550 ABCC6O95255 1503 aa26.63■■□□□ 1.85
SPSB3-207ENST00000565550 BCL9O00512 1426 aa26.63■■□□□ 1.85
SPSB3-207ENST00000565550 ERBB3P21860 1342 aa26.63■■□□□ 1.85
SPSB3-207ENST00000565550 WNK3Q9BYP7 1800 aa26.61■■□□□ 1.85
SPSB3-207ENST00000565550 SBF2Q86WG5 1849 aa26.6■■□□□ 1.85
SPSB3-207ENST00000565550 PROM2Q8N271 834 aa26.6■■□□□ 1.85
SPSB3-207ENST00000565550 ANKRD24Q8TF21 1146 aa26.6■■□□□ 1.85
SPSB3-207ENST00000565550 USP54Q70EL1 1684 aa26.59■■□□□ 1.85
SPSB3-207ENST00000565550 SLC24A1O60721 1099 aa26.57■■□□□ 1.84
SPSB3-207ENST00000565550 ANO8Q9HCE9 1232 aaPredicted RBP26.57■■□□□ 1.84
SPSB3-207ENST00000565550 KCNQ2O43526 872 aa26.56■■□□□ 1.84
SPSB3-207ENST00000565550 IL2RBP14784 551 aa26.56■■□□□ 1.84
SPSB3-207ENST00000565550 TNS2Q63HR2 1409 aa26.56■■□□□ 1.84
SPSB3-207ENST00000565550 SPON1Q9HCB6 807 aa26.55■■□□□ 1.84
SPSB3-207ENST00000565550 NINLQ9Y2I6 1382 aa26.55■■□□□ 1.84
SPSB3-207ENST00000565550 IP6K1Q92551 441 aa26.54■■□□□ 1.84
SPSB3-207ENST00000565550 TXNRD1Q16881 649 aa26.53■■□□□ 1.84
SPSB3-207ENST00000565550 RGPD3A6NKT7 1758 aaPredicted RBP26.53■■□□□ 1.84
SPSB3-207ENST00000565550 RGPD4Q7Z3J3 1758 aa26.53■■□□□ 1.84
SPSB3-207ENST00000565550 LTN1O94822 1766 aa26.52■■□□□ 1.84
SPSB3-207ENST00000565550 ACSBG1Q96GR2 724 aa26.52■■□□□ 1.84
SPSB3-207ENST00000565550 COG3Q96JB2 828 aa26.52■■□□□ 1.84
SPSB3-207ENST00000565550 LTV1Q96GA3 475 aaPredicted RBP26.51■■□□□ 1.83
SPSB3-207ENST00000565550 FBLN1P23142 703 aa26.5■■□□□ 1.83
SPSB3-207ENST00000565550 PPP1R1BQ9UD71 204 aaPredicted RBP26.5■■□□□ 1.83
SPSB3-207ENST00000565550 TIMELESSQ9UNS1 1208 aa26.5■■□□□ 1.83
SPSB3-207ENST00000565550 TMF1P82094 1093 aa26.48■■□□□ 1.83
SPSB3-207ENST00000565550 PDGFDQ9GZP0 370 aaPredicted RBP26.48■■□□□ 1.83
SPSB3-207ENST00000565550 MAP3K19Q56UN5 1328 aa26.47■■□□□ 1.83
SPSB3-207ENST00000565550 ANKRD36BQ8N2N9 1353 aa26.46■■□□□ 1.83
SPSB3-207ENST00000565550 STK32BQ9NY57 414 aa26.46■■□□□ 1.83
SPSB3-207ENST00000565550 USP47Q96K76 1375 aa26.46■■□□□ 1.83
SPSB3-207ENST00000565550 HOXC9P31274 260 aa26.45■■□□□ 1.82
SPSB3-207ENST00000565550 AMPHP49418 695 aa26.45■■□□□ 1.82
SPSB3-207ENST00000565550 SLC15A2Q16348 729 aa26.43■■□□□ 1.82
SPSB3-207ENST00000565550 FYB1O15117 783 aa26.42■■□□□ 1.82
SPSB3-207ENST00000565550 ZBTB7AO95365 584 aa26.42■■□□□ 1.82
SPSB3-207ENST00000565550 DDX54Q8TDD1 881 aaKnown RBP26.42■■□□□ 1.82
SPSB3-207ENST00000565550 GGNBP2Q9H3C7 697 aa26.41■■□□□ 1.82
SPSB3-207ENST00000565550 NHSQ6T4R5 1651 aa26.4■■□□□ 1.82
SPSB3-207ENST00000565550 RRS1Q15050 365 aaKnown RBP26.39■■□□□ 1.82
SPSB3-207ENST00000565550 ATF5Q9Y2D1 282 aaPredicted RBP26.38■■□□□ 1.81
SPSB3-207ENST00000565550 CDCA8Q53HL2 280 aa26.37■■□□□ 1.81
SPSB3-207ENST00000565550 CASZ1Q86V15 1759 aa26.37■■□□□ 1.81
SPSB3-207ENST00000565550 PTGER2P43116 358 aa26.35■■□□□ 1.81
SPSB3-207ENST00000565550 NBPF6Q5VWK0 638 aa26.33■■□□□ 1.81
SPSB3-207ENST00000565550 ZCRB1Q8TBF4 217 aaKnown RBP26.33■■□□□ 1.81
SPSB3-207ENST00000565550 NBPF4Q96M43 638 aa26.33■■□□□ 1.81
SPSB3-207ENST00000565550 LRRC4BQ9NT99 713 aa26.33■■□□□ 1.81
SPSB3-207ENST00000565550 RTL1A6NKG5 1358 aa26.33■■□□□ 1.8
SPSB3-207ENST00000565550 KAT6BQ8WYB5 2073 aa26.32■■□□□ 1.8
SPSB3-207ENST00000565550 FAM208AQ9UK61 1670 aaKnown RBP26.31■■□□□ 1.8
SPSB3-207ENST00000565550 DCAF8L1A6NGE4 600 aa26.31■■□□□ 1.8
SPSB3-207ENST00000565550 PRIM1P49642 420 aaKnown RBP26.31■■□□□ 1.8
SPSB3-207ENST00000565550 SYTL4Q96C24 671 aaPredicted RBP26.31■■□□□ 1.8
SPSB3-207ENST00000565550 BTAF1O14981 1849 aa26.3■■□□□ 1.8
SPSB3-207ENST00000565550 CARD14Q9BXL6 1004 aa26.3■■□□□ 1.8
SPSB3-207ENST00000565550 MTFR1LQ9H019 292 aa26.3■■□□□ 1.8
SPSB3-207ENST00000565550 ZNF827Q17R98 1081 aa26.29■■□□□ 1.8
SPSB3-207ENST00000565550 USHBP1Q8N6Y0 703 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms