RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 TOM1L2Q6ZVM7 507 aa21.18■□□□□ 0.98
SPG7-210ENST00000564409 NINLQ9Y2I6 1382 aa21.18■□□□□ 0.98
SPG7-210ENST00000564409 NFAT5O94916 1531 aa21.18■□□□□ 0.98
SPG7-210ENST00000564409 TRIM37O94972 964 aa21.17■□□□□ 0.98
SPG7-210ENST00000564409 TMC1Q8TDI8 760 aa21.17■□□□□ 0.98
SPG7-210ENST00000564409 EDC4Q6P2E9 1401 aaKnown RBP21.17■□□□□ 0.98
SPG7-210ENST00000564409 CD163L1Q9NR16 1453 aa21.17■□□□□ 0.98
SPG7-210ENST00000564409 RGPD5Q99666 1765 aa21.17■□□□□ 0.98
SPG7-210ENST00000564409 AXIN2Q9Y2T1 843 aa21.16■□□□□ 0.98
SPG7-210ENST00000564409 SLC12A5Q9H2X9 1139 aa21.15■□□□□ 0.98
SPG7-210ENST00000564409 WNK3Q9BYP7 1800 aa21.14■□□□□ 0.97
SPG7-210ENST00000564409 APBA3O96018 575 aa21.14■□□□□ 0.97
SPG7-210ENST00000564409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.14■□□□□ 0.97
SPG7-210ENST00000564409 CAMKK2Q96RR4 588 aa21.14■□□□□ 0.97
SPG7-210ENST00000564409 TESK2Q96S53 571 aa21.14■□□□□ 0.97
SPG7-210ENST00000564409 CARD10Q9BWT7 1032 aa21.14■□□□□ 0.97
SPG7-210ENST00000564409 OVOS2A0A0G2JMS6 1433 aa21.13■□□□□ 0.97
SPG7-210ENST00000564409 OVOS2A0A0J9YW53 1432 aa21.13■□□□□ 0.97
SPG7-210ENST00000564409 OVOS2Q6IE36 1432 aa21.13■□□□□ 0.97
SPG7-210ENST00000564409 SRCAPQ6ZRS2 3230 aa21.13■□□□□ 0.97
SPG7-210ENST00000564409 DDB1Q16531 1140 aa21.13■□□□□ 0.97
SPG7-210ENST00000564409 LRP5O75197 1615 aa21.13■□□□□ 0.97
SPG7-210ENST00000564409 ST20-MTHFSA0A0A6YYL1 179 aa21.12■□□□□ 0.97
SPG7-210ENST00000564409 LRRC37A3O60309 1634 aa21.11■□□□□ 0.97
SPG7-210ENST00000564409 SOX12O15370 315 aa21.11■□□□□ 0.97
SPG7-210ENST00000564409 CSB-PGBD3P0DP91 1061 aa21.11■□□□□ 0.97
SPG7-210ENST00000564409 EZH2Q15910 746 aaKnown RBP21.11■□□□□ 0.97
SPG7-210ENST00000564409 TIMELESSQ9UNS1 1208 aa21.11■□□□□ 0.97
SPG7-210ENST00000564409 A0A1W2PP64 1363 aa21.1■□□□□ 0.97
SPG7-210ENST00000564409 CCDC7Q96M83 1385 aa21.1■□□□□ 0.97
SPG7-210ENST00000564409 PEAK1Q9H792 1746 aa21.1■□□□□ 0.97
SPG7-210ENST00000564409 NME9Q86XW9 330 aa21.1■□□□□ 0.97
SPG7-210ENST00000564409 SBF2Q86WG5 1849 aa21.1■□□□□ 0.97
SPG7-210ENST00000564409 LTN1O94822 1766 aa21.1■□□□□ 0.97
SPG7-210ENST00000564409 CLSPNQ9HAW4 1339 aa21.09■□□□□ 0.97
SPG7-210ENST00000564409 BCL9O00512 1426 aa21.09■□□□□ 0.97
SPG7-210ENST00000564409 RREB1Q92766 1687 aa21.09■□□□□ 0.97
SPG7-210ENST00000564409 PSDA5PKW4 1024 aaPredicted RBP21.07■□□□□ 0.96
SPG7-210ENST00000564409 RGPD3A6NKT7 1758 aaPredicted RBP21.07■□□□□ 0.96
SPG7-210ENST00000564409 RGPD4Q7Z3J3 1758 aa21.07■□□□□ 0.96
SPG7-210ENST00000564409 ERBB3P21860 1342 aa21.05■□□□□ 0.96
SPG7-210ENST00000564409 TMF1P82094 1093 aa21.05■□□□□ 0.96
SPG7-210ENST00000564409 EXOC5O00471 708 aa21.04■□□□□ 0.96
SPG7-210ENST00000564409 R3HDM1Q15032 1099 aaKnown RBP21.04■□□□□ 0.96
SPG7-210ENST00000564409 CDCA8Q53HL2 280 aa21.04■□□□□ 0.96
SPG7-210ENST00000564409 NBPF14Q5TI25 921 aa21.04■□□□□ 0.96
SPG7-210ENST00000564409 USP47Q96K76 1375 aa21.04■□□□□ 0.96
SPG7-210ENST00000564409 PLSCR1O15162 318 aa21.03■□□□□ 0.96
SPG7-210ENST00000564409 BCL11BQ9C0K0 894 aaPredicted RBP21.03■□□□□ 0.96
SPG7-210ENST00000564409 NUP188Q5SRE5 1749 aa21.03■□□□□ 0.96
SPG7-210ENST00000564409 ANKRD36BQ8N2N9 1353 aa21.02■□□□□ 0.96
SPG7-210ENST00000564409 MARCH10Q8NA82 808 aaPredicted RBP21.02■□□□□ 0.96
SPG7-210ENST00000564409 COG3Q96JB2 828 aa21.01■□□□□ 0.95
SPG7-210ENST00000564409 FAM208AQ9UK61 1670 aaKnown RBP21■□□□□ 0.95
SPG7-210ENST00000564409 NLRP2Q9NX02 1062 aa21■□□□□ 0.95
SPG7-210ENST00000564409 TNS2Q63HR2 1409 aa20.99■□□□□ 0.95
SPG7-210ENST00000564409 ANKRD24Q8TF21 1146 aa20.99■□□□□ 0.95
SPG7-210ENST00000564409 IP6K1Q92551 441 aa20.99■□□□□ 0.95
SPG7-210ENST00000564409 IL2RBP14784 551 aa20.98■□□□□ 0.95
SPG7-210ENST00000564409 KAT6BQ8WYB5 2073 aa20.92■□□□□ 0.94
SPG7-210ENST00000564409 AMPHP49418 695 aa20.92■□□□□ 0.94
SPG7-210ENST00000564409 RTL1A6NKG5 1358 aa20.92■□□□□ 0.94
SPG7-210ENST00000564409 FYB1O15117 783 aa20.91■□□□□ 0.94
SPG7-210ENST00000564409 MAP3K19Q56UN5 1328 aa20.91■□□□□ 0.94
SPG7-210ENST00000564409 NHSQ6T4R5 1651 aa20.91■□□□□ 0.94
SPG7-210ENST00000564409 PCGF6Q9BYE7 350 aa20.91■□□□□ 0.94
SPG7-210ENST00000564409 HOXC9P31274 260 aa20.9■□□□□ 0.94
SPG7-210ENST00000564409 KIF20BQ96Q89 1820 aa20.89■□□□□ 0.93
SPG7-210ENST00000564409 PTF1AQ7RTS3 328 aa20.88■□□□□ 0.93
SPG7-210ENST00000564409 KIF24Q5T7B8 1368 aa20.87■□□□□ 0.93
SPG7-210ENST00000564409 PROM2Q8N271 834 aa20.86■□□□□ 0.93
SPG7-210ENST00000564409 LTV1Q96GA3 475 aaPredicted RBP20.86■□□□□ 0.93
SPG7-210ENST00000564409 SPON1Q9HCB6 807 aa20.86■□□□□ 0.93
SPG7-210ENST00000564409 MYOM1P52179 1685 aa20.86■□□□□ 0.93
SPG7-210ENST00000564409 TXNRD1Q16881 649 aa20.85■□□□□ 0.93
SPG7-210ENST00000564409 GGNBP2Q9H3C7 697 aa20.85■□□□□ 0.93
SPG7-210ENST00000564409 KCNQ2O43526 872 aa20.84■□□□□ 0.93
SPG7-210ENST00000564409 SMG6Q86US8 1419 aaKnown RBP20.84■□□□□ 0.93
SPG7-210ENST00000564409 BTAF1O14981 1849 aa20.83■□□□□ 0.93
SPG7-210ENST00000564409 CGNL1Q0VF96 1302 aa20.83■□□□□ 0.93
SPG7-210ENST00000564409 RGPD2P0DJD1 1756 aa20.83■□□□□ 0.93
SPG7-210ENST00000564409 FBLN1P23142 703 aa20.81■□□□□ 0.92
SPG7-210ENST00000564409 RRS1Q15050 365 aaKnown RBP20.81■□□□□ 0.92
SPG7-210ENST00000564409 ACSBG1Q96GR2 724 aa20.81■□□□□ 0.92
SPG7-210ENST00000564409 ANO8Q9HCE9 1232 aaPredicted RBP20.81■□□□□ 0.92
SPG7-210ENST00000564409 STK32BQ9NY57 414 aa20.81■□□□□ 0.92
SPG7-210ENST00000564409 CASZ1Q86V15 1759 aa20.81■□□□□ 0.92
SPG7-210ENST00000564409 INSRP06213 1382 aa20.81■□□□□ 0.92
SPG7-210ENST00000564409 DDX54Q8TDD1 881 aaKnown RBP20.8■□□□□ 0.92
SPG7-210ENST00000564409 CARD14Q9BXL6 1004 aa20.8■□□□□ 0.92
SPG7-210ENST00000564409 FLT4P35916 1363 aa20.8■□□□□ 0.92
SPG7-210ENST00000564409 SLC15A2Q16348 729 aa20.79■□□□□ 0.92
SPG7-210ENST00000564409 ZCRB1Q8TBF4 217 aaKnown RBP20.79■□□□□ 0.92
SPG7-210ENST00000564409 NSD3Q9BZ95 1437 aa20.78■□□□□ 0.92
SPG7-210ENST00000564409 EIF4G2P78344 907 aaKnown RBP eCLIP20.77■□□□□ 0.92
SPG7-210ENST00000564409 CCER1Q8TC90 406 aaPredicted RBP20.77■□□□□ 0.92
SPG7-210ENST00000564409 RAPGEF4Q8WZA2 1011 aa20.77■□□□□ 0.92
SPG7-210ENST00000564409 PPP1R1BQ9UD71 204 aaPredicted RBP20.77■□□□□ 0.92
SPG7-210ENST00000564409 NBPF6Q5VWK0 638 aa20.76■□□□□ 0.91
SPG7-210ENST00000564409 NBPF4Q96M43 638 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms