RNA–Protein interactions for RNA: ENST00000564240.1

AC004449.1-201, humanhuman

BASIC

Gene AC004449.1, Length 433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004449.1-201ENST00000564240 PIK3C2AO00443 1686 aa23.21■■□□□ 1.31
AC004449.1-201ENST00000564240 CPSF1Q10570 1443 aaKnown RBP23.2■■□□□ 1.3
AC004449.1-201ENST00000564240 SLC12A5Q9H2X9 1139 aa23.2■■□□□ 1.3
AC004449.1-201ENST00000564240 SRCAPQ6ZRS2 3230 aa23.2■■□□□ 1.3
AC004449.1-201ENST00000564240 EXOC5O00471 708 aa23.19■■□□□ 1.3
AC004449.1-201ENST00000564240 CARD10Q9BWT7 1032 aa23.19■■□□□ 1.3
AC004449.1-201ENST00000564240 OVOS2A0A0G2JMS6 1433 aa23.18■■□□□ 1.3
AC004449.1-201ENST00000564240 OVOS2A0A0J9YW53 1432 aa23.18■■□□□ 1.3
AC004449.1-201ENST00000564240 OVOS2Q6IE36 1432 aa23.18■■□□□ 1.3
AC004449.1-201ENST00000564240 NME9Q86XW9 330 aa23.18■■□□□ 1.3
AC004449.1-201ENST00000564240 TERF2IPQ9NYB0 399 aa23.18■■□□□ 1.3
AC004449.1-201ENST00000564240 AKAP12Q02952 1782 aa23.17■■□□□ 1.3
AC004449.1-201ENST00000564240 LRP5O75197 1615 aa23.16■■□□□ 1.3
AC004449.1-201ENST00000564240 SBNO2Q9Y2G9 1366 aa23.15■■□□□ 1.3
AC004449.1-201ENST00000564240 MARCH10Q8NA82 808 aaPredicted RBP23.15■■□□□ 1.3
AC004449.1-201ENST00000564240 NLRP2Q9NX02 1062 aa23.15■■□□□ 1.3
AC004449.1-201ENST00000564240 PARP4Q9UKK3 1724 aaKnown RBP23.15■■□□□ 1.3
AC004449.1-201ENST00000564240 BCL11BQ9C0K0 894 aaPredicted RBP23.14■■□□□ 1.29
AC004449.1-201ENST00000564240 COL18A1P39060 1754 aa23.14■■□□□ 1.29
AC004449.1-201ENST00000564240 RGPD5Q99666 1765 aa23.12■■□□□ 1.29
AC004449.1-201ENST00000564240 PLSCR1O15162 318 aa23.12■■□□□ 1.29
AC004449.1-201ENST00000564240 CCDC7Q96M83 1385 aa23.11■■□□□ 1.29
AC004449.1-201ENST00000564240 ST20-MTHFSA0A0A6YYL1 179 aa23.1■■□□□ 1.29
AC004449.1-201ENST00000564240 TRIM26Q12899 539 aaPredicted RBP23.1■■□□□ 1.29
AC004449.1-201ENST00000564240 PPP1R1BQ9UD71 204 aaPredicted RBP23.1■■□□□ 1.29
AC004449.1-201ENST00000564240 USP31Q70CQ4 1352 aa23.1■■□□□ 1.29
AC004449.1-201ENST00000564240 SLC24A1O60721 1099 aa23.09■■□□□ 1.29
AC004449.1-201ENST00000564240 PTF1AQ7RTS3 328 aa23.09■■□□□ 1.29
AC004449.1-201ENST00000564240 PUS7Q96PZ0 661 aaKnown RBP23.09■■□□□ 1.29
AC004449.1-201ENST00000564240 ANKRD24Q8TF21 1146 aa23.08■■□□□ 1.29
AC004449.1-201ENST00000564240 SPON1Q9HCB6 807 aa23.07■■□□□ 1.28
AC004449.1-201ENST00000564240 MON2Q7Z3U7 1717 aa23.06■■□□□ 1.28
AC004449.1-201ENST00000564240 LTV1Q96GA3 475 aaPredicted RBP23.06■■□□□ 1.28
AC004449.1-201ENST00000564240 LRRC37A3O60309 1634 aa23.06■■□□□ 1.28
AC004449.1-201ENST00000564240 NFAT5O94916 1531 aa23.06■■□□□ 1.28
AC004449.1-201ENST00000564240 EDC4Q6P2E9 1401 aaKnown RBP23.06■■□□□ 1.28
AC004449.1-201ENST00000564240 IL2RBP14784 551 aa23.05■■□□□ 1.28
AC004449.1-201ENST00000564240 CD163L1Q9NR16 1453 aa23.05■■□□□ 1.28
AC004449.1-201ENST00000564240 KAT6BQ8WYB5 2073 aa23.04■■□□□ 1.28
AC004449.1-201ENST00000564240 RREB1Q92766 1687 aa23.04■■□□□ 1.28
AC004449.1-201ENST00000564240 KCNQ2O43526 872 aa23.04■■□□□ 1.28
AC004449.1-201ENST00000564240 ACSBG1Q96GR2 724 aa23.04■■□□□ 1.28
AC004449.1-201ENST00000564240 COG3Q96JB2 828 aa23.04■■□□□ 1.28
AC004449.1-201ENST00000564240 NUP188Q5SRE5 1749 aa23.04■■□□□ 1.28
AC004449.1-201ENST00000564240 ERBB3P21860 1342 aa23.04■■□□□ 1.28
AC004449.1-201ENST00000564240 A0A1W2PP64 1363 aa23.03■■□□□ 1.28
AC004449.1-201ENST00000564240 PEAK1Q9H792 1746 aa23.02■■□□□ 1.28
AC004449.1-201ENST00000564240 SBF2Q86WG5 1849 aa23.02■■□□□ 1.28
AC004449.1-201ENST00000564240 DCAF8L1A6NGE4 600 aa23.01■■□□□ 1.27
AC004449.1-201ENST00000564240 TESK2Q96S53 571 aa23.01■■□□□ 1.27
AC004449.1-201ENST00000564240 STK32BQ9NY57 414 aa23.01■■□□□ 1.27
AC004449.1-201ENST00000564240 AMPHP49418 695 aa23■■□□□ 1.27
AC004449.1-201ENST00000564240 TXNRD1Q16881 649 aa23■■□□□ 1.27
AC004449.1-201ENST00000564240 PROM2Q8N271 834 aa23■■□□□ 1.27
AC004449.1-201ENST00000564240 IP6K1Q92551 441 aa23■■□□□ 1.27
AC004449.1-201ENST00000564240 TMF1P82094 1093 aa22.99■■□□□ 1.27
AC004449.1-201ENST00000564240 WNK3Q9BYP7 1800 aa22.98■■□□□ 1.27
AC004449.1-201ENST00000564240 ANO8Q9HCE9 1232 aaPredicted RBP22.98■■□□□ 1.27
AC004449.1-201ENST00000564240 NINLQ9Y2I6 1382 aa22.98■■□□□ 1.27
AC004449.1-201ENST00000564240 BCL9O00512 1426 aa22.98■■□□□ 1.27
AC004449.1-201ENST00000564240 ABCC6O95255 1503 aa22.98■■□□□ 1.27
AC004449.1-201ENST00000564240 DDX54Q8TDD1 881 aaKnown RBP22.97■■□□□ 1.27
AC004449.1-201ENST00000564240 LTN1O94822 1766 aa22.96■■□□□ 1.27
AC004449.1-201ENST00000564240 TNS2Q63HR2 1409 aa22.96■■□□□ 1.27
AC004449.1-201ENST00000564240 FBLN1P23142 703 aa22.95■■□□□ 1.26
AC004449.1-201ENST00000564240 ZBTB7AO95365 584 aa22.94■■□□□ 1.26
AC004449.1-201ENST00000564240 SLC15A2Q16348 729 aa22.93■■□□□ 1.26
AC004449.1-201ENST00000564240 ATF5Q9Y2D1 282 aaPredicted RBP22.93■■□□□ 1.26
AC004449.1-201ENST00000564240 CDCA8Q53HL2 280 aa22.92■■□□□ 1.26
AC004449.1-201ENST00000564240 MAP3K19Q56UN5 1328 aa22.91■■□□□ 1.26
AC004449.1-201ENST00000564240 HOXC9P31274 260 aa22.91■■□□□ 1.26
AC004449.1-201ENST00000564240 PDGFDQ9GZP0 370 aaPredicted RBP22.91■■□□□ 1.26
AC004449.1-201ENST00000564240 GGNBP2Q9H3C7 697 aa22.91■■□□□ 1.26
AC004449.1-201ENST00000564240 RGPD3A6NKT7 1758 aaPredicted RBP22.91■■□□□ 1.26
AC004449.1-201ENST00000564240 RGPD4Q7Z3J3 1758 aa22.91■■□□□ 1.26
AC004449.1-201ENST00000564240 USP54Q70EL1 1684 aa22.9■■□□□ 1.26
AC004449.1-201ENST00000564240 USP47Q96K76 1375 aa22.9■■□□□ 1.26
AC004449.1-201ENST00000564240 SYTL4Q96C24 671 aaPredicted RBP22.9■■□□□ 1.26
AC004449.1-201ENST00000564240 ANKRD36BQ8N2N9 1353 aa22.89■■□□□ 1.26
AC004449.1-201ENST00000564240 PCGF6Q9BYE7 350 aa22.89■■□□□ 1.25
AC004449.1-201ENST00000564240 RRS1Q15050 365 aaKnown RBP22.88■■□□□ 1.25
AC004449.1-201ENST00000564240 FYB1O15117 783 aa22.87■■□□□ 1.25
AC004449.1-201ENST00000564240 ZCRB1Q8TBF4 217 aaKnown RBP22.85■■□□□ 1.25
AC004449.1-201ENST00000564240 YY1P25490 414 aa22.84■■□□□ 1.25
AC004449.1-201ENST00000564240 PRIM1P49642 420 aaKnown RBP22.83■■□□□ 1.25
AC004449.1-201ENST00000564240 RAPGEF4Q8WZA2 1011 aa22.82■■□□□ 1.24
AC004449.1-201ENST00000564240 POLR3GLQ9BT43 218 aa22.82■■□□□ 1.24
AC004449.1-201ENST00000564240 MTFR1LQ9H019 292 aa22.82■■□□□ 1.24
AC004449.1-201ENST00000564240 NHSQ6T4R5 1651 aa22.81■■□□□ 1.24
AC004449.1-201ENST00000564240 USHBP1Q8N6Y0 703 aa22.81■■□□□ 1.24
AC004449.1-201ENST00000564240 NBPF6Q5VWK0 638 aa22.8■■□□□ 1.24
AC004449.1-201ENST00000564240 NBPF4Q96M43 638 aa22.8■■□□□ 1.24
AC004449.1-201ENST00000564240 TATP17735 454 aaPredicted RBP22.79■■□□□ 1.24
AC004449.1-201ENST00000564240 PTGER2P43116 358 aa22.79■■□□□ 1.24
AC004449.1-201ENST00000564240 TIMELESSQ9UNS1 1208 aa22.79■■□□□ 1.24
AC004449.1-201ENST00000564240 SMG6Q86US8 1419 aaKnown RBP22.79■■□□□ 1.24
AC004449.1-201ENST00000564240 PPM1GO15355 546 aaPredicted RBP22.78■■□□□ 1.24
AC004449.1-201ENST00000564240 SLC27A3Q5K4L6 730 aa22.78■■□□□ 1.24
AC004449.1-201ENST00000564240 LRRC4BQ9NT99 713 aa22.78■■□□□ 1.24
AC004449.1-201ENST00000564240 BTAF1O14981 1849 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms