RNA–Protein interactions for RNA: ENST00000564014.1

SNHG9-202, Transcript of small nucleolar RNA host gene 9, humanhuman

BASIC

Gene SNHG9, Length 471 nt, Biotype lincRNA, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG9-202ENST00000564014 CPSF1Q10570 1443 aaKnown RBP23.64■■□□□ 1.37
SNHG9-202ENST00000564014 TMC1Q8TDI8 760 aa23.63■■□□□ 1.37
SNHG9-202ENST00000564014 CARD11Q9BXL7 1154 aa23.63■■□□□ 1.37
SNHG9-202ENST00000564014 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.62■■□□□ 1.37
SNHG9-202ENST00000564014 PPP1R1BQ9UD71 204 aaPredicted RBP23.62■■□□□ 1.37
SNHG9-202ENST00000564014 PARP4Q9UKK3 1724 aaKnown RBP23.62■■□□□ 1.37
SNHG9-202ENST00000564014 CARD10Q9BWT7 1032 aa23.61■■□□□ 1.37
SNHG9-202ENST00000564014 PIK3C2AO00443 1686 aa23.6■■□□□ 1.37
SNHG9-202ENST00000564014 EXOC5O00471 708 aa23.6■■□□□ 1.37
SNHG9-202ENST00000564014 BCL11BQ9C0K0 894 aaPredicted RBP23.6■■□□□ 1.37
SNHG9-202ENST00000564014 PLSCR1O15162 318 aa23.59■■□□□ 1.37
SNHG9-202ENST00000564014 SPON1Q9HCB6 807 aa23.59■■□□□ 1.37
SNHG9-202ENST00000564014 HDGFL2Q7Z4V5 671 aaPredicted RBP23.58■■□□□ 1.37
SNHG9-202ENST00000564014 MARCH10Q8NA82 808 aaPredicted RBP23.57■■□□□ 1.36
SNHG9-202ENST00000564014 TONSLQ96HA7 1378 aa23.55■■□□□ 1.36
SNHG9-202ENST00000564014 CCDC7Q96M83 1385 aa23.55■■□□□ 1.36
SNHG9-202ENST00000564014 DCAF8L1A6NGE4 600 aa23.55■■□□□ 1.36
SNHG9-202ENST00000564014 KCNQ2O43526 872 aa23.55■■□□□ 1.36
SNHG9-202ENST00000564014 RREB1Q92766 1687 aa23.54■■□□□ 1.36
SNHG9-202ENST00000564014 NLRP2Q9NX02 1062 aa23.54■■□□□ 1.36
SNHG9-202ENST00000564014 LRRC37A3O60309 1634 aa23.54■■□□□ 1.36
SNHG9-202ENST00000564014 SBNO2Q9Y2G9 1366 aa23.53■■□□□ 1.36
SNHG9-202ENST00000564014 NUP188Q5SRE5 1749 aa23.53■■□□□ 1.36
SNHG9-202ENST00000564014 NME9Q86XW9 330 aa23.53■■□□□ 1.36
SNHG9-202ENST00000564014 COL18A1P39060 1754 aa23.52■■□□□ 1.36
SNHG9-202ENST00000564014 PTF1AQ7RTS3 328 aa23.52■■□□□ 1.36
SNHG9-202ENST00000564014 TERF2IPQ9NYB0 399 aa23.52■■□□□ 1.36
SNHG9-202ENST00000564014 AKAP12Q02952 1782 aa23.51■■□□□ 1.35
SNHG9-202ENST00000564014 SLC12A5Q9H2X9 1139 aa23.51■■□□□ 1.35
SNHG9-202ENST00000564014 USP31Q70CQ4 1352 aa23.5■■□□□ 1.35
SNHG9-202ENST00000564014 PEAK1Q9H792 1746 aa23.49■■□□□ 1.35
SNHG9-202ENST00000564014 STK32BQ9NY57 414 aa23.48■■□□□ 1.35
SNHG9-202ENST00000564014 BCL9O00512 1426 aa23.48■■□□□ 1.35
SNHG9-202ENST00000564014 NFAT5O94916 1531 aa23.48■■□□□ 1.35
SNHG9-202ENST00000564014 TXNRD1Q16881 649 aa23.47■■□□□ 1.35
SNHG9-202ENST00000564014 ANO8Q9HCE9 1232 aaPredicted RBP23.47■■□□□ 1.35
SNHG9-202ENST00000564014 IL2RBP14784 551 aa23.46■■□□□ 1.35
SNHG9-202ENST00000564014 ERBB3P21860 1342 aa23.46■■□□□ 1.35
SNHG9-202ENST00000564014 ANKRD24Q8TF21 1146 aa23.46■■□□□ 1.35
SNHG9-202ENST00000564014 PROM2Q8N271 834 aa23.45■■□□□ 1.34
SNHG9-202ENST00000564014 ABCC6O95255 1503 aa23.44■■□□□ 1.34
SNHG9-202ENST00000564014 ACSBG1Q96GR2 724 aa23.44■■□□□ 1.34
SNHG9-202ENST00000564014 TNS2Q63HR2 1409 aa23.43■■□□□ 1.34
SNHG9-202ENST00000564014 EDC4Q6P2E9 1401 aaKnown RBP23.43■■□□□ 1.34
SNHG9-202ENST00000564014 PUS7Q96PZ0 661 aaKnown RBP23.43■■□□□ 1.34
SNHG9-202ENST00000564014 CD163L1Q9NR16 1453 aa23.43■■□□□ 1.34
SNHG9-202ENST00000564014 MON2Q7Z3U7 1717 aa23.42■■□□□ 1.34
SNHG9-202ENST00000564014 ZBTB7AO95365 584 aa23.42■■□□□ 1.34
SNHG9-202ENST00000564014 RGPD5Q99666 1765 aa23.42■■□□□ 1.34
SNHG9-202ENST00000564014 NINLQ9Y2I6 1382 aa23.41■■□□□ 1.34
SNHG9-202ENST00000564014 SLC24A1O60721 1099 aa23.41■■□□□ 1.34
SNHG9-202ENST00000564014 YY1P25490 414 aa23.41■■□□□ 1.34
SNHG9-202ENST00000564014 RGPD3A6NKT7 1758 aaPredicted RBP23.41■■□□□ 1.34
SNHG9-202ENST00000564014 RGPD4Q7Z3J3 1758 aa23.41■■□□□ 1.34
SNHG9-202ENST00000564014 A0A1W2PP64 1363 aa23.4■■□□□ 1.34
SNHG9-202ENST00000564014 SBF2Q86WG5 1849 aa23.4■■□□□ 1.34
SNHG9-202ENST00000564014 WNK3Q9BYP7 1800 aa23.4■■□□□ 1.34
SNHG9-202ENST00000564014 SLC15A2Q16348 729 aa23.4■■□□□ 1.34
SNHG9-202ENST00000564014 LTV1Q96GA3 475 aaPredicted RBP23.4■■□□□ 1.34
SNHG9-202ENST00000564014 COG3Q96JB2 828 aa23.39■■□□□ 1.33
SNHG9-202ENST00000564014 ATF5Q9Y2D1 282 aaPredicted RBP23.39■■□□□ 1.33
SNHG9-202ENST00000564014 ST20-MTHFSA0A0A6YYL1 179 aa23.38■■□□□ 1.33
SNHG9-202ENST00000564014 PDGFDQ9GZP0 370 aaPredicted RBP23.38■■□□□ 1.33
SNHG9-202ENST00000564014 IP6K1Q92551 441 aa23.37■■□□□ 1.33
SNHG9-202ENST00000564014 AMPHP49418 695 aa23.35■■□□□ 1.33
SNHG9-202ENST00000564014 DDX54Q8TDD1 881 aaKnown RBP23.35■■□□□ 1.33
SNHG9-202ENST00000564014 TESK2Q96S53 571 aa23.32■■□□□ 1.32
SNHG9-202ENST00000564014 MTFR1LQ9H019 292 aa23.32■■□□□ 1.32
SNHG9-202ENST00000564014 SYTL4Q96C24 671 aaPredicted RBP23.31■■□□□ 1.32
SNHG9-202ENST00000564014 LTN1O94822 1766 aa23.31■■□□□ 1.32
SNHG9-202ENST00000564014 USP54Q70EL1 1684 aa23.31■■□□□ 1.32
SNHG9-202ENST00000564014 PTGER2P43116 358 aa23.29■■□□□ 1.32
SNHG9-202ENST00000564014 TMF1P82094 1093 aa23.29■■□□□ 1.32
SNHG9-202ENST00000564014 MAP3K19Q56UN5 1328 aa23.29■■□□□ 1.32
SNHG9-202ENST00000564014 HOXC9P31274 260 aa23.28■■□□□ 1.32
SNHG9-202ENST00000564014 CASZ1Q86V15 1759 aa23.27■■□□□ 1.32
SNHG9-202ENST00000564014 NHSQ6T4R5 1651 aa23.27■■□□□ 1.32
SNHG9-202ENST00000564014 FHDC1Q9C0D6 1143 aaPredicted RBP23.26■■□□□ 1.31
SNHG9-202ENST00000564014 FBLN1P23142 703 aa23.25■■□□□ 1.31
SNHG9-202ENST00000564014 ANKRD36BQ8N2N9 1353 aa23.25■■□□□ 1.31
SNHG9-202ENST00000564014 SYT17Q9BSW7 474 aa23.24■■□□□ 1.31
SNHG9-202ENST00000564014 CDCA8Q53HL2 280 aa23.23■■□□□ 1.31
SNHG9-202ENST00000564014 SLC27A3Q5K4L6 730 aa23.23■■□□□ 1.31
SNHG9-202ENST00000564014 ZCRB1Q8TBF4 217 aaKnown RBP23.23■■□□□ 1.31
SNHG9-202ENST00000564014 ARXQ96QS3 562 aa23.23■■□□□ 1.31
SNHG9-202ENST00000564014 GGNBP2Q9H3C7 697 aa23.23■■□□□ 1.31
SNHG9-202ENST00000564014 PRIM1P49642 420 aaKnown RBP23.22■■□□□ 1.31
SNHG9-202ENST00000564014 TRIM26Q12899 539 aaPredicted RBP23.22■■□□□ 1.31
SNHG9-202ENST00000564014 LRRC4BQ9NT99 713 aa23.22■■□□□ 1.31
SNHG9-202ENST00000564014 RRS1Q15050 365 aaKnown RBP23.21■■□□□ 1.31
SNHG9-202ENST00000564014 ZNF827Q17R98 1081 aa23.21■■□□□ 1.31
SNHG9-202ENST00000564014 USP47Q96K76 1375 aa23.2■■□□□ 1.3
SNHG9-202ENST00000564014 RAPGEF4Q8WZA2 1011 aa23.2■■□□□ 1.3
SNHG9-202ENST00000564014 TFCP2L1Q9NZI6 479 aa23.2■■□□□ 1.3
SNHG9-202ENST00000564014 KAT6BQ8WYB5 2073 aa23.2■■□□□ 1.3
SNHG9-202ENST00000564014 MYOM1P52179 1685 aa23.19■■□□□ 1.3
SNHG9-202ENST00000564014 SMG6Q86US8 1419 aaKnown RBP23.19■■□□□ 1.3
SNHG9-202ENST00000564014 FYB1O15117 783 aa23.19■■□□□ 1.3
SNHG9-202ENST00000564014 POLD1P28340 1107 aa23.19■■□□□ 1.3
SNHG9-202ENST00000564014 RTL1A6NKG5 1358 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms