RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 ZFP42Q96MM3 310 aa7.86□□□□□ -1.15
HMGB1P33-201ENST00000563485 CCDC116Q8IYX3 515 aa7.85□□□□□ -1.15
HMGB1P33-201ENST00000563485 PURBQ96QR8 312 aaKnown RBP7.85□□□□□ -1.15
HMGB1P33-201ENST00000563485 KCTD15Q96SI1 283 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P33-201ENST00000563485 SCARF1Q14162 830 aa7.83□□□□□ -1.16
HMGB1P33-201ENST00000563485 BANK1Q8NDB2 785 aa7.83□□□□□ -1.16
HMGB1P33-201ENST00000563485 CDV3Q9UKY7 258 aaKnown RBP7.83□□□□□ -1.16
HMGB1P33-201ENST00000563485 INTS6LQ5JSJ4 861 aaKnown RBP7.82□□□□□ -1.16
HMGB1P33-201ENST00000563485 PPP1R26Q5T8A7 1209 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P33-201ENST00000563485 TREML4Q6UXN2 200 aa7.82□□□□□ -1.16
HMGB1P33-201ENST00000563485 MEIOBQ8N635 442 aa7.82□□□□□ -1.16
HMGB1P33-201ENST00000563485 MTMR14Q8NCE2 650 aa7.82□□□□□ -1.16
HMGB1P33-201ENST00000563485 SNRKQ9NRH2 765 aa7.82□□□□□ -1.16
HMGB1P33-201ENST00000563485 EMILIN1Q9Y6C2 1016 aa7.82□□□□□ -1.16
HMGB1P33-201ENST00000563485 C6orf118Q5T5N4 469 aa7.81□□□□□ -1.16
HMGB1P33-201ENST00000563485 DZIP3Q86Y13 1208 aaKnown RBP7.81□□□□□ -1.16
HMGB1P33-201ENST00000563485 GPR37L1O60883 481 aa7.8□□□□□ -1.16
HMGB1P33-201ENST00000563485 NFX1Q12986 1120 aaKnown RBP7.8□□□□□ -1.16
HMGB1P33-201ENST00000563485 LCE2AQ5TA79 106 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P33-201ENST00000563485 LINC00528Q8N1L1 170 aa7.8□□□□□ -1.16
HMGB1P33-201ENST00000563485 SOBPA7XYQ1 873 aa7.79□□□□□ -1.16
HMGB1P33-201ENST00000563485 ZBBXA8MT70 800 aa7.79□□□□□ -1.16
HMGB1P33-201ENST00000563485 FBXO45P0C2W1 286 aa7.79□□□□□ -1.16
HMGB1P33-201ENST00000563485 RAB15P59190 212 aa7.79□□□□□ -1.16
HMGB1P33-201ENST00000563485 CBLBQ13191 982 aa7.79□□□□□ -1.16
HMGB1P33-201ENST00000563485 NBPF20Q3BBV1 942 aa7.79□□□□□ -1.16
HMGB1P33-201ENST00000563485 PGPEP1Q9NXJ5 209 aa7.79□□□□□ -1.16
HMGB1P33-201ENST00000563485 SOCS7O14512 581 aa7.78□□□□□ -1.16
HMGB1P33-201ENST00000563485 TERTO14746 1132 aaKnown RBP7.78□□□□□ -1.16
HMGB1P33-201ENST00000563485 WFS1O76024 890 aa7.78□□□□□ -1.16
HMGB1P33-201ENST00000563485 BMP2P12643 396 aa7.78□□□□□ -1.16
HMGB1P33-201ENST00000563485 DHX9Q08211 1270 aaKnown RBP7.78□□□□□ -1.16
HMGB1P33-201ENST00000563485 UPP2O95045 317 aa7.77□□□□□ -1.17
HMGB1P33-201ENST00000563485 Q6ZVU0 165 aa7.77□□□□□ -1.17
HMGB1P33-201ENST00000563485 TMPRSS4Q9NRS4 437 aa7.77□□□□□ -1.17
HMGB1P33-201ENST00000563485 PCDHB9Q9Y5E1 797 aa7.77□□□□□ -1.17
HMGB1P33-201ENST00000563485 NDUFB9Q9Y6M9 179 aa7.77□□□□□ -1.17
HMGB1P33-201ENST00000563485 ESPNB1AK53 854 aa7.76□□□□□ -1.17
HMGB1P33-201ENST00000563485 LCE2CQ5TA81 110 aa7.76□□□□□ -1.17
HMGB1P33-201ENST00000563485 ERVH48-1M5A8F1 160 aa7.75□□□□□ -1.17
HMGB1P33-201ENST00000563485 NR1H3Q13133 447 aa7.75□□□□□ -1.17
HMGB1P33-201ENST00000563485 TSEN34Q9BSV6 310 aaKnown RBP7.75□□□□□ -1.17
HMGB1P33-201ENST00000563485 NXF1Q9UBU9 619 aaKnown RBP7.75□□□□□ -1.17
HMGB1P33-201ENST00000563485 VEGFBP49765 207 aa7.74□□□□□ -1.17
HMGB1P33-201ENST00000563485 ZNF784Q8NCA9 323 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P33-201ENST00000563485 AGBL1Q96MI9 1066 aa7.74□□□□□ -1.17
HMGB1P33-201ENST00000563485 SOS2Q07890 1332 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P33-201ENST00000563485 APBB1O00213 710 aa7.73□□□□□ -1.17
HMGB1P33-201ENST00000563485 MAN1A2O60476 641 aa7.73□□□□□ -1.17
HMGB1P33-201ENST00000563485 GIGYF1O75420 1035 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P33-201ENST00000563485 TBC1D2BQ9UPU7 963 aa7.73□□□□□ -1.17
HMGB1P33-201ENST00000563485 RELBQ01201 579 aa7.72□□□□□ -1.17
HMGB1P33-201ENST00000563485 DNMT3LQ9UJW3 386 aa7.72□□□□□ -1.17
HMGB1P33-201ENST00000563485 SPINT1O43278 529 aa7.71□□□□□ -1.18
HMGB1P33-201ENST00000563485 LILRA1O75019 489 aa7.71□□□□□ -1.18
HMGB1P33-201ENST00000563485 ADD1P35611 737 aaKnown RBP7.71□□□□□ -1.18
HMGB1P33-201ENST00000563485 SEPT12Q8IYM1 358 aa7.71□□□□□ -1.18
HMGB1P33-201ENST00000563485 CYLDQ9NQC7 956 aa7.71□□□□□ -1.18
HMGB1P33-201ENST00000563485 TTLL8A6PVC2 850 aa7.7□□□□□ -1.18
HMGB1P33-201ENST00000563485 SLC16A10Q8TF71 515 aa7.7□□□□□ -1.18
HMGB1P33-201ENST00000563485 H3BM21 787 aa7.69□□□□□ -1.18
HMGB1P33-201ENST00000563485 ADH1AP07327 375 aa7.69□□□□□ -1.18
HMGB1P33-201ENST00000563485 NPAS3Q8IXF0 933 aa7.69□□□□□ -1.18
HMGB1P33-201ENST00000563485 INSM2Q96T92 566 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P33-201ENST00000563485 ZNF395Q9H8N7 513 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P33-201ENST00000563485 ZNF330Q9Y3S2 320 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P33-201ENST00000563485 FIGNL2A6NMB9 653 aa7.68□□□□□ -1.18
HMGB1P33-201ENST00000563485 CTSOP43234 321 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P33-201ENST00000563485 IRF5Q13568 498 aa7.68□□□□□ -1.18
HMGB1P33-201ENST00000563485 KDF1Q8NAX2 398 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P33-201ENST00000563485 WIPF1O43516 503 aa7.67□□□□□ -1.18
HMGB1P33-201ENST00000563485 MCCD1P59942 119 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P33-201ENST00000563485 MCM6Q14566 821 aa7.67□□□□□ -1.18
HMGB1P33-201ENST00000563485 ERBB4Q15303 1308 aa7.67□□□□□ -1.18
HMGB1P33-201ENST00000563485 PTGIRP43119 386 aa7.66□□□□□ -1.18
HMGB1P33-201ENST00000563485 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.66□□□□□ -1.18
HMGB1P33-201ENST00000563485 GDPD2Q9HCC8 539 aa7.66□□□□□ -1.18
HMGB1P33-201ENST00000563485 PRM3Q9NNZ6 103 aa7.66□□□□□ -1.18
HMGB1P33-201ENST00000563485 POLMQ9NP87 494 aaPredicted RBP7.66□□□□□ -1.18
HMGB1P33-201ENST00000563485 GMPRP36959 345 aa7.65□□□□□ -1.18
HMGB1P33-201ENST00000563485 RNF20Q5VTR2 975 aa7.65□□□□□ -1.18
HMGB1P33-201ENST00000563485 ZNF592Q92610 1267 aa7.65□□□□□ -1.18
HMGB1P33-201ENST00000563485 IRF7Q92985 503 aa7.65□□□□□ -1.18
HMGB1P33-201ENST00000563485 PCDHB11Q9Y5F2 797 aa7.65□□□□□ -1.18
HMGB1P33-201ENST00000563485 PPFIA3O75145 1194 aa7.64□□□□□ -1.19
HMGB1P33-201ENST00000563485 ABL2P42684 1182 aa7.64□□□□□ -1.19
HMGB1P33-201ENST00000563485 SCTRP47872 440 aa7.64□□□□□ -1.19
HMGB1P33-201ENST00000563485 ERVK-9P63128 1117 aa7.64□□□□□ -1.19
HMGB1P33-201ENST00000563485 FOXD4L5Q5VV16 416 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P33-201ENST00000563485 CC2D2BQ6DHV5 1058 aa7.64□□□□□ -1.19
HMGB1P33-201ENST00000563485 RNF217Q8TC41 542 aa7.64□□□□□ -1.19
HMGB1P33-201ENST00000563485 ATP5J2-PTCD1G3V325 749 aa7.63□□□□□ -1.19
HMGB1P33-201ENST00000563485 PTSQ03393 145 aa7.63□□□□□ -1.19
HMGB1P33-201ENST00000563485 VAC14Q08AM6 782 aa7.63□□□□□ -1.19
HMGB1P33-201ENST00000563485 CCDC125Q86Z20 511 aa7.63□□□□□ -1.19
HMGB1P33-201ENST00000563485 CEP126Q9P2H0 1117 aa7.63□□□□□ -1.19
HMGB1P33-201ENST00000563485 TRIM52Q96A61 297 aa7.62□□□□□ -1.19
HMGB1P33-201ENST00000563485 CCDC85AQ96PX6 553 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P33-201ENST00000563485 VSIG8P0DPA2 414 aa7.61□□□□□ -1.19
HMGB1P33-201ENST00000563485 EIF4G2P78344 907 aaKnown RBP eCLIP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms