RNA–Protein interactions for RNA: ENST00000561878.1

TMEM170A-202, Transcript of transmembrane protein 170A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM170A, Length 1,072 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-202ENST00000561878 SLC12A5Q9H2X9 1139 aa33.05■■■□□ 2.88
TMEM170A-202ENST00000561878 USP31Q70CQ4 1352 aa33.05■■■□□ 2.88
TMEM170A-202ENST00000561878 WDR17Q8IZU2 1322 aa33.04■■■□□ 2.88
TMEM170A-202ENST00000561878 EDC4Q6P2E9 1401 aaKnown RBP33.04■■■□□ 2.88
TMEM170A-202ENST00000561878 ABCC6O95255 1503 aa33.04■■■□□ 2.88
TMEM170A-202ENST00000561878 TESK2Q96S53 571 aa33.03■■■□□ 2.88
TMEM170A-202ENST00000561878 AXIN2Q9Y2T1 843 aa33.03■■■□□ 2.88
TMEM170A-202ENST00000561878 NINLQ9Y2I6 1382 aa33.03■■■□□ 2.88
TMEM170A-202ENST00000561878 RGPD5Q99666 1765 aa33.02■■■□□ 2.88
TMEM170A-202ENST00000561878 TRIM37O94972 964 aa33.02■■■□□ 2.88
TMEM170A-202ENST00000561878 EN1Q05925 392 aaPredicted RBP33.02■■■□□ 2.88
TMEM170A-202ENST00000561878 A0A1W2PP64 1363 aa33■■■□□ 2.87
TMEM170A-202ENST00000561878 C11orf95C9JLR9 678 aaPredicted RBP33■■■□□ 2.87
TMEM170A-202ENST00000561878 NME9Q86XW9 330 aa32.99■■■□□ 2.87
TMEM170A-202ENST00000561878 WNK3Q9BYP7 1800 aa32.99■■■□□ 2.87
TMEM170A-202ENST00000561878 CSB-PGBD3P0DP91 1061 aa32.98■■■□□ 2.87
TMEM170A-202ENST00000561878 LRRC37A3O60309 1634 aa32.97■■■□□ 2.87
TMEM170A-202ENST00000561878 CDCA7Q9BWT1 371 aaPredicted RBP32.96■■■□□ 2.87
TMEM170A-202ENST00000561878 USP47Q96K76 1375 aa32.95■■■□□ 2.86
TMEM170A-202ENST00000561878 APBA3O96018 575 aa32.94■■■□□ 2.86
TMEM170A-202ENST00000561878 DDB1Q16531 1140 aa32.94■■■□□ 2.86
TMEM170A-202ENST00000561878 TIMELESSQ9UNS1 1208 aa32.94■■■□□ 2.86
TMEM170A-202ENST00000561878 CLSPNQ9HAW4 1339 aa32.94■■■□□ 2.86
TMEM170A-202ENST00000561878 PARD3Q8TEW0 1356 aa32.94■■■□□ 2.86
TMEM170A-202ENST00000561878 OVOS2A0A0G2JMS6 1433 aa32.94■■■□□ 2.86
TMEM170A-202ENST00000561878 OVOS2A0A0J9YW53 1432 aa32.94■■■□□ 2.86
TMEM170A-202ENST00000561878 OVOS2Q6IE36 1432 aa32.94■■■□□ 2.86
TMEM170A-202ENST00000561878 LTN1O94822 1766 aa32.93■■■□□ 2.86
TMEM170A-202ENST00000561878 CARD10Q9BWT7 1032 aa32.93■■■□□ 2.86
TMEM170A-202ENST00000561878 TMF1P82094 1093 aa32.91■■■□□ 2.86
TMEM170A-202ENST00000561878 EZH2Q15910 746 aaKnown RBP32.91■■■□□ 2.86
TMEM170A-202ENST00000561878 CAMKK2Q96RR4 588 aa32.9■■■□□ 2.86
TMEM170A-202ENST00000561878 CCDC7Q96M83 1385 aa32.9■■■□□ 2.86
TMEM170A-202ENST00000561878 PEAK1Q9H792 1746 aa32.88■■■□□ 2.85
TMEM170A-202ENST00000561878 PCGF6Q9BYE7 350 aa32.88■■■□□ 2.85
TMEM170A-202ENST00000561878 SRCAPQ6ZRS2 3230 aa32.86■■■□□ 2.85
TMEM170A-202ENST00000561878 PSDA5PKW4 1024 aaPredicted RBP32.86■■■□□ 2.85
TMEM170A-202ENST00000561878 ANKRD36BQ8N2N9 1353 aa32.85■■■□□ 2.85
TMEM170A-202ENST00000561878 ERBB3P21860 1342 aa32.84■■■□□ 2.85
TMEM170A-202ENST00000561878 RREB1Q92766 1687 aa32.84■■■□□ 2.85
TMEM170A-202ENST00000561878 CDCA8Q53HL2 280 aa32.83■■■□□ 2.85
TMEM170A-202ENST00000561878 LRP5O75197 1615 aa32.83■■■□□ 2.85
TMEM170A-202ENST00000561878 SBF2Q86WG5 1849 aa32.82■■■□□ 2.84
TMEM170A-202ENST00000561878 COG3Q96JB2 828 aa32.81■■■□□ 2.84
TMEM170A-202ENST00000561878 EXOC5O00471 708 aa32.79■■■□□ 2.84
TMEM170A-202ENST00000561878 R3HDM1Q15032 1099 aaKnown RBP32.79■■■□□ 2.84
TMEM170A-202ENST00000561878 NLRP2Q9NX02 1062 aa32.79■■■□□ 2.84
TMEM170A-202ENST00000561878 BCL9O00512 1426 aa32.78■■■□□ 2.84
TMEM170A-202ENST00000561878 NUP188Q5SRE5 1749 aa32.78■■■□□ 2.84
TMEM170A-202ENST00000561878 ANKRD24Q8TF21 1146 aa32.78■■■□□ 2.84
TMEM170A-202ENST00000561878 MARCH10Q8NA82 808 aaPredicted RBP32.77■■■□□ 2.84
TMEM170A-202ENST00000561878 TNS2Q63HR2 1409 aa32.77■■■□□ 2.84
TMEM170A-202ENST00000561878 RGPD3A6NKT7 1758 aaPredicted RBP32.76■■■□□ 2.84
TMEM170A-202ENST00000561878 RGPD4Q7Z3J3 1758 aa32.76■■■□□ 2.84
TMEM170A-202ENST00000561878 IP6K1Q92551 441 aa32.74■■■□□ 2.83
TMEM170A-202ENST00000561878 FAM208AQ9UK61 1670 aaKnown RBP32.74■■■□□ 2.83
TMEM170A-202ENST00000561878 NBPF14Q5TI25 921 aa32.73■■■□□ 2.83
TMEM170A-202ENST00000561878 BCL11BQ9C0K0 894 aaPredicted RBP32.73■■■□□ 2.83
TMEM170A-202ENST00000561878 IL2RBP14784 551 aa32.71■■■□□ 2.83
TMEM170A-202ENST00000561878 PLSCR1O15162 318 aa32.7■■■□□ 2.83
TMEM170A-202ENST00000561878 AMPHP49418 695 aa32.67■■■□□ 2.82
TMEM170A-202ENST00000561878 MAP3K19Q56UN5 1328 aa32.67■■■□□ 2.82
TMEM170A-202ENST00000561878 KIF20BQ96Q89 1820 aa32.67■■■□□ 2.82
TMEM170A-202ENST00000561878 FYB1O15117 783 aa32.65■■■□□ 2.82
TMEM170A-202ENST00000561878 MYOM1P52179 1685 aa32.65■■■□□ 2.82
TMEM170A-202ENST00000561878 RTL1A6NKG5 1358 aa32.64■■■□□ 2.82
TMEM170A-202ENST00000561878 HOXC9P31274 260 aa32.64■■■□□ 2.82
TMEM170A-202ENST00000561878 LTV1Q96GA3 475 aaPredicted RBP32.64■■■□□ 2.82
TMEM170A-202ENST00000561878 GGNBP2Q9H3C7 697 aa32.64■■■□□ 2.82
TMEM170A-202ENST00000561878 CCER1Q8TC90 406 aaPredicted RBP32.63■■■□□ 2.81
TMEM170A-202ENST00000561878 PTF1AQ7RTS3 328 aa32.61■■■□□ 2.81
TMEM170A-202ENST00000561878 NHSQ6T4R5 1651 aa32.61■■■□□ 2.81
TMEM170A-202ENST00000561878 FBLN1P23142 703 aa32.58■■■□□ 2.81
TMEM170A-202ENST00000561878 RRS1Q15050 365 aaKnown RBP32.56■■■□□ 2.8
TMEM170A-202ENST00000561878 SMG6Q86US8 1419 aaKnown RBP32.55■■■□□ 2.8
TMEM170A-202ENST00000561878 NSD3Q9BZ95 1437 aa32.55■■■□□ 2.8
TMEM170A-202ENST00000561878 RGPD2P0DJD1 1756 aa32.53■■■□□ 2.8
TMEM170A-202ENST00000561878 KCNQ2O43526 872 aa32.52■■■□□ 2.8
TMEM170A-202ENST00000561878 ACSBG1Q96GR2 724 aa32.52■■■□□ 2.8
TMEM170A-202ENST00000561878 CARD14Q9BXL6 1004 aa32.52■■■□□ 2.8
TMEM170A-202ENST00000561878 KIF24Q5T7B8 1368 aa32.51■■■□□ 2.79
TMEM170A-202ENST00000561878 EIF4G2P78344 907 aaKnown RBP eCLIP32.51■■■□□ 2.79
TMEM170A-202ENST00000561878 TXNRD1Q16881 649 aa32.5■■■□□ 2.79
TMEM170A-202ENST00000561878 PROM2Q8N271 834 aa32.49■■■□□ 2.79
TMEM170A-202ENST00000561878 FLT4P35916 1363 aa32.48■■■□□ 2.79
TMEM170A-202ENST00000561878 BTAF1O14981 1849 aa32.47■■■□□ 2.79
TMEM170A-202ENST00000561878 DDX54Q8TDD1 881 aaKnown RBP32.47■■■□□ 2.79
TMEM170A-202ENST00000561878 POLR3GLQ9BT43 218 aa32.47■■■□□ 2.79
TMEM170A-202ENST00000561878 ANO8Q9HCE9 1232 aaPredicted RBP32.47■■■□□ 2.79
TMEM170A-202ENST00000561878 INSRP06213 1382 aa32.46■■■□□ 2.79
TMEM170A-202ENST00000561878 KAT6BQ8WYB5 2073 aa32.46■■■□□ 2.79
TMEM170A-202ENST00000561878 CGNL1Q0VF96 1302 aa32.46■■■□□ 2.79
TMEM170A-202ENST00000561878 SPON1Q9HCB6 807 aa32.44■■■□□ 2.78
TMEM170A-202ENST00000561878 MEGF6O75095 1541 aa32.43■■■□□ 2.78
TMEM170A-202ENST00000561878 HSPA5P11021 654 aaKnown RBP32.43■■■□□ 2.78
TMEM170A-202ENST00000561878 NBPF6Q5VWK0 638 aa32.43■■■□□ 2.78
TMEM170A-202ENST00000561878 ZCRB1Q8TBF4 217 aaKnown RBP32.43■■■□□ 2.78
TMEM170A-202ENST00000561878 NBPF4Q96M43 638 aa32.43■■■□□ 2.78
TMEM170A-202ENST00000561878 STK32BQ9NY57 414 aa32.43■■■□□ 2.78
TMEM170A-202ENST00000561878 SHANK3Q9BYB0 1731 aa32.41■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms