RNA–Protein interactions for RNA: ENST00000561702.5

SPG7-203, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-203ENST00000561702 CADPS2Q86UW7 1296 aa18.61■□□□□ 0.57
SPG7-203ENST00000561702 TCP11L2Q8N4U5 519 aa18.61■□□□□ 0.57
SPG7-203ENST00000561702 MAP3K19Q56UN5 1328 aa18.6■□□□□ 0.57
SPG7-203ENST00000561702 XPCQ01831 940 aaPredicted RBP18.59■□□□□ 0.57
SPG7-203ENST00000561702 CENPQQ7L2Z9 268 aaPredicted RBP18.59■□□□□ 0.57
SPG7-203ENST00000561702 NOP58Q9Y2X3 529 aaKnown RBP18.59■□□□□ 0.57
SPG7-203ENST00000561702 RRP7AQ9Y3A4 280 aaKnown RBP18.59■□□□□ 0.57
SPG7-203ENST00000561702 IPO9Q96P70 1041 aaKnown RBP18.58■□□□□ 0.56
SPG7-203ENST00000561702 DMRT2Q9Y5R5 561 aa18.58■□□□□ 0.56
SPG7-203ENST00000561702 KRT28Q7Z3Y7 464 aa18.57■□□□□ 0.56
SPG7-203ENST00000561702 SBNO1A3KN83 1393 aa18.57■□□□□ 0.56
SPG7-203ENST00000561702 LTN1O94822 1766 aa18.57■□□□□ 0.56
SPG7-203ENST00000561702 RGPD1P0DJD0 1748 aa18.57■□□□□ 0.56
SPG7-203ENST00000561702 FCHSD2O94868 740 aa18.57■□□□□ 0.56
SPG7-203ENST00000561702 RSPH6AQ9H0K4 717 aa18.57■□□□□ 0.56
SPG7-203ENST00000561702 ALS2Q96Q42 1657 aa18.57■□□□□ 0.56
SPG7-203ENST00000561702 EIF4A2Q14240 407 aaKnown RBP18.56■□□□□ 0.56
SPG7-203ENST00000561702 HSP90AB2PQ58FF8 381 aa18.56■□□□□ 0.56
SPG7-203ENST00000561702 WWC1Q8IX03 1113 aa18.56■□□□□ 0.56
SPG7-203ENST00000561702 PHF23Q9BUL5 403 aaPredicted RBP18.56■□□□□ 0.56
SPG7-203ENST00000561702 NFAT5O94916 1531 aa18.56■□□□□ 0.56
SPG7-203ENST00000561702 NEUROD2Q15784 382 aa18.56■□□□□ 0.56
SPG7-203ENST00000561702 CCDC27Q2M243 656 aa18.56■□□□□ 0.56
SPG7-203ENST00000561702 FLT4P35916 1363 aa18.55■□□□□ 0.56
SPG7-203ENST00000561702 KDM2BQ8NHM5 1336 aa18.55■□□□□ 0.56
SPG7-203ENST00000561702 PDE4AP27815 886 aa18.55■□□□□ 0.56
SPG7-203ENST00000561702 BACH2Q9BYV9 841 aa18.55■□□□□ 0.56
SPG7-203ENST00000561702 HMOX1P09601 288 aa18.54■□□□□ 0.56
SPG7-203ENST00000561702 C20orf194Q5TEA3 1177 aa18.54■□□□□ 0.56
SPG7-203ENST00000561702 WDR63Q8IWG1 891 aa18.54■□□□□ 0.56
SPG7-203ENST00000561702 PNNQ9H307 717 aaKnown RBP18.54■□□□□ 0.56
SPG7-203ENST00000561702 SPINK5Q9NQ38 1064 aaPredicted RBP18.54■□□□□ 0.56
SPG7-203ENST00000561702 PRKAR2BP31323 418 aa18.54■□□□□ 0.56
SPG7-203ENST00000561702 SLIT3O75094 1523 aa18.54■□□□□ 0.56
SPG7-203ENST00000561702 MAPK8IP3Q9UPT6 1336 aa18.53■□□□□ 0.56
SPG7-203ENST00000561702 PDE3AQ14432 1141 aa18.53■□□□□ 0.56
SPG7-203ENST00000561702 DDX17Q92841 729 aaKnown RBP18.53■□□□□ 0.56
SPG7-203ENST00000561702 TMPOP42166 694 aaKnown RBP18.52■□□□□ 0.56
SPG7-203ENST00000561702 AMPHP49418 695 aa18.52■□□□□ 0.56
SPG7-203ENST00000561702 KIF24Q5T7B8 1368 aa18.52■□□□□ 0.56
SPG7-203ENST00000561702 AAMPQ13685 434 aa18.51■□□□□ 0.55
SPG7-203ENST00000561702 ZBTB47Q9UFB7 747 aaPredicted RBP18.5■□□□□ 0.55
SPG7-203ENST00000561702 PXDNQ92626 1479 aa18.5■□□□□ 0.55
SPG7-203ENST00000561702 HOXC9P31274 260 aa18.5■□□□□ 0.55
SPG7-203ENST00000561702 USP19O94966 1318 aa18.5■□□□□ 0.55
SPG7-203ENST00000561702 PHRF1Q9P1Y6 1649 aaKnown RBP18.5■□□□□ 0.55
SPG7-203ENST00000561702 DLG5Q8TDM6 1919 aa18.5■□□□□ 0.55
SPG7-203ENST00000561702 BRINP3Q76B58 766 aa18.49■□□□□ 0.55
SPG7-203ENST00000561702 PHACTR3Q96KR7 559 aa18.49■□□□□ 0.55
SPG7-203ENST00000561702 NPHP3Q7Z494 1330 aa18.49■□□□□ 0.55
SPG7-203ENST00000561702 LMOD2Q6P5Q4 547 aa18.49■□□□□ 0.55
SPG7-203ENST00000561702 KCNH5Q8NCM2 988 aa18.49■□□□□ 0.55
SPG7-203ENST00000561702 TRIM35Q9UPQ4 493 aa18.49■□□□□ 0.55
SPG7-203ENST00000561702 RTL1A6NKG5 1358 aa18.48■□□□□ 0.55
SPG7-203ENST00000561702 AEBP1Q8IUX7 1158 aa18.48■□□□□ 0.55
SPG7-203ENST00000561702 MED1Q15648 1581 aaPredicted RBP18.48■□□□□ 0.55
SPG7-203ENST00000561702 SLAIN2Q9P270 581 aa18.47■□□□□ 0.55
SPG7-203ENST00000561702 ARHGEF10O15013 1369 aa18.47■□□□□ 0.55
SPG7-203ENST00000561702 SULT6B1Q6IMI4 303 aa18.47■□□□□ 0.55
SPG7-203ENST00000561702 GCP02774 474 aa18.46■□□□□ 0.55
SPG7-203ENST00000561702 RIPK4P57078 832 aa18.46■□□□□ 0.55
SPG7-203ENST00000561702 TNS3Q68CZ2 1445 aa18.46■□□□□ 0.54
SPG7-203ENST00000561702 NEFMP07197 916 aa18.45■□□□□ 0.54
SPG7-203ENST00000561702 MYH16Q9H6N6 1097 aa18.45■□□□□ 0.54
SPG7-203ENST00000561702 BCAR3O75815 825 aa18.45■□□□□ 0.54
SPG7-203ENST00000561702 NFE2L2Q16236 605 aa18.45■□□□□ 0.54
SPG7-203ENST00000561702 IP6K1Q92551 441 aa18.45■□□□□ 0.54
SPG7-203ENST00000561702 CRYBG1Q9Y4K1 1723 aa18.45■□□□□ 0.54
SPG7-203ENST00000561702 PLEKHG5O94827 1062 aa18.44■□□□□ 0.54
SPG7-203ENST00000561702 LTBP4Q8N2S1 1624 aa18.44■□□□□ 0.54
SPG7-203ENST00000561702 IGSF1Q8N6C5 1336 aa18.44■□□□□ 0.54
SPG7-203ENST00000561702 CT47B1P0C2W7 299 aaPredicted RBP18.44■□□□□ 0.54
SPG7-203ENST00000561702 EYA1Q99502 592 aa18.44■□□□□ 0.54
SPG7-203ENST00000561702 ARHGEF25Q86VW2 580 aa18.43■□□□□ 0.54
SPG7-203ENST00000561702 SPATA31A3Q5VYP0 1347 aa18.42■□□□□ 0.54
SPG7-203ENST00000561702 CANXP27824 592 aaKnown RBP18.42■□□□□ 0.54
SPG7-203ENST00000561702 RGPD2P0DJD1 1756 aa18.42■□□□□ 0.54
SPG7-203ENST00000561702 KDRP35968 1356 aa18.42■□□□□ 0.54
SPG7-203ENST00000561702 NHSL1Q5SYE7 1610 aa18.41■□□□□ 0.54
SPG7-203ENST00000561702 RGPD5Q99666 1765 aa18.41■□□□□ 0.54
SPG7-203ENST00000561702 ZBTB7CA1YPR0 619 aa18.41■□□□□ 0.54
SPG7-203ENST00000561702 DDRGK1Q96HY6 314 aa18.41■□□□□ 0.54
SPG7-203ENST00000561702 LTV1Q96GA3 475 aaPredicted RBP18.4■□□□□ 0.54
SPG7-203ENST00000561702 RARSP54136 660 aaKnown RBP18.4■□□□□ 0.54
SPG7-203ENST00000561702 SOS2Q07890 1332 aaPredicted RBP18.39■□□□□ 0.54
SPG7-203ENST00000561702 IL16Q14005 1332 aa18.39■□□□□ 0.53
SPG7-203ENST00000561702 FAM161AQ3B820 660 aa18.39■□□□□ 0.53
SPG7-203ENST00000561702 CLUAP1Q96AJ1 413 aa18.38■□□□□ 0.53
SPG7-203ENST00000561702 COL18A1P39060 1754 aa18.37■□□□□ 0.53
SPG7-203ENST00000561702 NPM2Q86SE8 214 aaKnown RBP18.36■□□□□ 0.53
SPG7-203ENST00000561702 CABLES1Q8TDN4 633 aa18.36■□□□□ 0.53
SPG7-203ENST00000561702 ZC3H6P61129 1189 aaKnown RBP18.35■□□□□ 0.53
SPG7-203ENST00000561702 THUMPD2Q9BTF0 503 aaKnown RBP18.35■□□□□ 0.53
SPG7-203ENST00000561702 LMOD3Q0VAK6 560 aa18.34■□□□□ 0.53
SPG7-203ENST00000561702 TSR2Q969E8 191 aaKnown RBP18.34■□□□□ 0.53
SPG7-203ENST00000561702 AXIN2Q9Y2T1 843 aa18.34■□□□□ 0.53
SPG7-203ENST00000561702 CAMTA1Q9Y6Y1 1673 aa18.34■□□□□ 0.53
SPG7-203ENST00000561702 ABCA3Q99758 1704 aa18.34■□□□□ 0.53
SPG7-203ENST00000561702 NBPF6Q5VWK0 638 aa18.33■□□□□ 0.53
SPG7-203ENST00000561702 USHBP1Q8N6Y0 703 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms