RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 UNC5CLQ8IV45 518 aa10.68□□□□□ -0.7
ZEB1-223ENST00000561304 NGDNQ8NEJ9 315 aaKnown RBP10.68□□□□□ -0.7
ZEB1-223ENST00000561304 LMO7Q8WWI1 1683 aa10.68□□□□□ -0.7
ZEB1-223ENST00000561304 MON2Q7Z3U7 1717 aa10.68□□□□□ -0.7
ZEB1-223ENST00000561304 PPIP5K1Q6PFW1 1433 aa10.68□□□□□ -0.7
ZEB1-223ENST00000561304 POTEB2H3BUK9 544 aa10.67□□□□□ -0.7
ZEB1-223ENST00000561304 HAP1P54257 671 aaPredicted RBP10.67□□□□□ -0.7
ZEB1-223ENST00000561304 NBPF8Q3BBV2 869 aa10.67□□□□□ -0.7
ZEB1-223ENST00000561304 GJD4Q96KN9 370 aaPredicted RBP10.67□□□□□ -0.7
ZEB1-223ENST00000561304 THSD7AQ9UPZ6 1657 aa10.67□□□□□ -0.7
ZEB1-223ENST00000561304 RGPD5Q99666 1765 aa10.67□□□□□ -0.7
ZEB1-223ENST00000561304 FAM83GA6ND36 823 aa10.66□□□□□ -0.7
ZEB1-223ENST00000561304 PYGBP11216 843 aa10.66□□□□□ -0.7
ZEB1-223ENST00000561304 PCDH10Q9P2E7 1040 aa10.66□□□□□ -0.7
ZEB1-223ENST00000561304 PCDHB13Q9Y5F0 798 aa10.66□□□□□ -0.7
ZEB1-223ENST00000561304 ACEP12821 1306 aa10.66□□□□□ -0.7
ZEB1-223ENST00000561304 ROCK2O75116 1388 aaKnown RBP10.66□□□□□ -0.7
ZEB1-223ENST00000561304 CABP2Q9NPB3 220 aa10.65□□□□□ -0.7
ZEB1-223ENST00000561304 ATAD2Q6PL18 1390 aa10.65□□□□□ -0.7
ZEB1-223ENST00000561304 WNK3Q9BYP7 1800 aa10.65□□□□□ -0.7
ZEB1-223ENST00000561304 PLEKHG3A1L390 1219 aa10.65□□□□□ -0.71
ZEB1-223ENST00000561304 NUTM2GQ5VZR2 741 aa10.65□□□□□ -0.71
ZEB1-223ENST00000561304 COL18A1P39060 1754 aa10.64□□□□□ -0.71
ZEB1-223ENST00000561304 SRPK2P78362 688 aaKnown RBP10.64□□□□□ -0.71
ZEB1-223ENST00000561304 VPS72Q15906 364 aa10.64□□□□□ -0.71
ZEB1-223ENST00000561304 TNS1Q9HBL0 1735 aaKnown RBP10.63□□□□□ -0.71
ZEB1-223ENST00000561304 SLIT3O75094 1523 aa10.63□□□□□ -0.71
ZEB1-223ENST00000561304 USP6P35125 1406 aa10.63□□□□□ -0.71
ZEB1-223ENST00000561304 KIAA0232Q92628 1395 aa10.63□□□□□ -0.71
ZEB1-223ENST00000561304 BTG4Q9NY30 223 aa10.63□□□□□ -0.71
ZEB1-223ENST00000561304 USP54Q70EL1 1684 aa10.62□□□□□ -0.71
ZEB1-223ENST00000561304 CAMTA1Q9Y6Y1 1673 aa10.62□□□□□ -0.71
ZEB1-223ENST00000561304 SRCAPQ6ZRS2 3230 aa10.62□□□□□ -0.71
ZEB1-223ENST00000561304 SSH2Q76I76 1423 aa10.62□□□□□ -0.71
ZEB1-223ENST00000561304 TRIM26Q12899 539 aaPredicted RBP10.62□□□□□ -0.71
ZEB1-223ENST00000561304 LTN1O94822 1766 aa10.61□□□□□ -0.71
ZEB1-223ENST00000561304 RGPD1P0DJD0 1748 aa10.61□□□□□ -0.71
ZEB1-223ENST00000561304 USP19O94966 1318 aa10.61□□□□□ -0.71
ZEB1-223ENST00000561304 CHRNA2Q15822 529 aa10.61□□□□□ -0.71
ZEB1-223ENST00000561304 TONSLQ96HA7 1378 aa10.6□□□□□ -0.71
ZEB1-223ENST00000561304 IFNL1Q8IU54 200 aa10.6□□□□□ -0.71
ZEB1-223ENST00000561304 SEPT12Q8IYM1 358 aa10.6□□□□□ -0.71
ZEB1-223ENST00000561304 PRDM11Q9NQV5 511 aa10.6□□□□□ -0.71
ZEB1-223ENST00000561304 CABP1Q9NZU7 370 aa10.6□□□□□ -0.71
ZEB1-223ENST00000561304 CCDC9Q9Y3X0 531 aaKnown RBP10.6□□□□□ -0.71
ZEB1-223ENST00000561304 EVC2Q86UK5 1308 aa10.59□□□□□ -0.71
ZEB1-223ENST00000561304 TIE1P35590 1138 aa10.59□□□□□ -0.71
ZEB1-223ENST00000561304 ZC3H6P61129 1189 aaKnown RBP10.59□□□□□ -0.71
ZEB1-223ENST00000561304 ZNF467Q7Z7K2 595 aaPredicted RBP10.59□□□□□ -0.71
ZEB1-223ENST00000561304 ABTB2Q8N961 1025 aa10.59□□□□□ -0.71
ZEB1-223ENST00000561304 PARP4Q9UKK3 1724 aaKnown RBP10.59□□□□□ -0.71
ZEB1-223ENST00000561304 CD163L1Q9NR16 1453 aa10.59□□□□□ -0.71
ZEB1-223ENST00000561304 SBNO2Q9Y2G9 1366 aa10.58□□□□□ -0.72
ZEB1-223ENST00000561304 SPATA31A5Q5VU36 1347 aa10.58□□□□□ -0.72
ZEB1-223ENST00000561304 SPATA31A7Q8IWB4 1347 aa10.58□□□□□ -0.72
ZEB1-223ENST00000561304 ONECUT3O60422 494 aaPredicted RBP10.58□□□□□ -0.72
ZEB1-223ENST00000561304 FAM98CQ17RN3 349 aaKnown RBP10.58□□□□□ -0.72
ZEB1-223ENST00000561304 ASTLQ6HA08 431 aaPredicted RBP10.58□□□□□ -0.72
ZEB1-223ENST00000561304 CPDO75976 1380 aa10.58□□□□□ -0.72
ZEB1-223ENST00000561304 NFAT5O94916 1531 aa10.57□□□□□ -0.72
ZEB1-223ENST00000561304 SBF2Q86WG5 1849 aa10.57□□□□□ -0.72
ZEB1-223ENST00000561304 COL5A2P05997 1499 aaPredicted RBP10.57□□□□□ -0.72
ZEB1-223ENST00000561304 LRRC37A3O60309 1634 aa10.57□□□□□ -0.72
ZEB1-223ENST00000561304 CPSF1Q10570 1443 aaKnown RBP10.57□□□□□ -0.72
ZEB1-223ENST00000561304 BLMP54132 1417 aaPredicted RBP10.56□□□□□ -0.72
ZEB1-223ENST00000561304 CARD11Q9BXL7 1154 aa10.56□□□□□ -0.72
ZEB1-223ENST00000561304 BRD4O60885 1362 aaPredicted RBP10.56□□□□□ -0.72
ZEB1-223ENST00000561304 SPATA31A1Q5TZJ5 1347 aa10.56□□□□□ -0.72
ZEB1-223ENST00000561304 FAM182BQ5T319 152 aa10.55□□□□□ -0.72
ZEB1-223ENST00000561304 KRT27Q7Z3Y8 459 aa10.55□□□□□ -0.72
ZEB1-223ENST00000561304 STRN4Q9NRL3 753 aa10.55□□□□□ -0.72
ZEB1-223ENST00000561304 MYOM1P52179 1685 aa10.55□□□□□ -0.72
ZEB1-223ENST00000561304 PEAK1Q9H792 1746 aa10.55□□□□□ -0.72
ZEB1-223ENST00000561304 A0A0G2JS52 829 aa10.54□□□□□ -0.72
ZEB1-223ENST00000561304 ATMINO43313 823 aaPredicted RBP10.54□□□□□ -0.72
ZEB1-223ENST00000561304 GCP02774 474 aa10.54□□□□□ -0.72
ZEB1-223ENST00000561304 MYT1Q01538 1121 aa10.54□□□□□ -0.72
ZEB1-223ENST00000561304 TRPC6Q9Y210 931 aa10.54□□□□□ -0.72
ZEB1-223ENST00000561304 RREB1Q92766 1687 aa10.54□□□□□ -0.72
ZEB1-223ENST00000561304 TTC21BQ7Z4L5 1316 aa10.54□□□□□ -0.72
ZEB1-223ENST00000561304 LARP1Q6PKG0 1096 aaKnown RBP10.53□□□□□ -0.72
ZEB1-223ENST00000561304 NLRP13Q86W25 1043 aa10.53□□□□□ -0.72
ZEB1-223ENST00000561304 BMP2KQ9NSY1 1161 aaPredicted RBP10.53□□□□□ -0.72
ZEB1-223ENST00000561304 PCDHB8Q9UN66 801 aa10.53□□□□□ -0.72
ZEB1-223ENST00000561304 KIF20BQ96Q89 1820 aa10.53□□□□□ -0.72
ZEB1-223ENST00000561304 NLRP6P59044 892 aa10.52□□□□□ -0.72
ZEB1-223ENST00000561304 DEFB132Q7Z7B7 95 aa10.52□□□□□ -0.72
ZEB1-223ENST00000561304 KTN1Q86UP2 1357 aaKnown RBP10.52□□□□□ -0.72
ZEB1-223ENST00000561304 RGPD2P0DJD1 1756 aa10.52□□□□□ -0.72
ZEB1-223ENST00000561304 NUP188Q5SRE5 1749 aa10.52□□□□□ -0.73
ZEB1-223ENST00000561304 TESK2Q96S53 571 aa10.52□□□□□ -0.73
ZEB1-223ENST00000561304 USP35Q9P2H5 1018 aa10.52□□□□□ -0.73
ZEB1-223ENST00000561304 A0A1W2PP64 1363 aa10.51□□□□□ -0.73
ZEB1-223ENST00000561304 AATKQ6ZMQ8 1374 aa10.51□□□□□ -0.73
ZEB1-223ENST00000561304 ZBTB7CA1YPR0 619 aa10.51□□□□□ -0.73
ZEB1-223ENST00000561304 CCDC125Q86Z20 511 aa10.51□□□□□ -0.73
ZEB1-223ENST00000561304 ABCC6O95255 1503 aa10.5□□□□□ -0.73
ZEB1-223ENST00000561304 CRB1P82279 1406 aa10.5□□□□□ -0.73
ZEB1-223ENST00000561304 TTC21AQ8NDW8 1320 aa10.5□□□□□ -0.73
ZEB1-223ENST00000561304 TTLL13PA6NNM8 815 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms