RNA–Protein interactions for RNA: ENST00000561278.1

SHF-211, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-211ENST00000561278 COL18A1P39060 1754 aa17.62■□□□□ 0.41
SHF-211ENST00000561278 ST20-MTHFSA0A0A6YYL1 179 aa17.62■□□□□ 0.41
SHF-211ENST00000561278 ARHGEF25Q86VW2 580 aa17.62■□□□□ 0.41
SHF-211ENST00000561278 NME9Q86XW9 330 aa17.62■□□□□ 0.41
SHF-211ENST00000561278 TERF2IPQ9NYB0 399 aa17.62■□□□□ 0.41
SHF-211ENST00000561278 AXIN2Q9Y2T1 843 aa17.62■□□□□ 0.41
SHF-211ENST00000561278 A0A1W2PP64 1363 aa17.62■□□□□ 0.41
SHF-211ENST00000561278 WDR17Q8IZU2 1322 aa17.61■□□□□ 0.41
SHF-211ENST00000561278 EDC4Q6P2E9 1401 aaKnown RBP17.61■□□□□ 0.41
SHF-211ENST00000561278 LRRC37A3O60309 1634 aa17.61■□□□□ 0.41
SHF-211ENST00000561278 SRCAPQ6ZRS2 3230 aa17.6■□□□□ 0.41
SHF-211ENST00000561278 PSDA5PKW4 1024 aaPredicted RBP17.6■□□□□ 0.41
SHF-211ENST00000561278 DISP2A7MBM2 1401 aa17.6■□□□□ 0.41
SHF-211ENST00000561278 APBA3O96018 575 aa17.59■□□□□ 0.41
SHF-211ENST00000561278 WNK3Q9BYP7 1800 aa17.58■□□□□ 0.41
SHF-211ENST00000561278 USP54Q70EL1 1684 aa17.58■□□□□ 0.41
SHF-211ENST00000561278 OVOS2A0A0G2JMS6 1433 aa17.58■□□□□ 0.41
SHF-211ENST00000561278 OVOS2A0A0J9YW53 1432 aa17.58■□□□□ 0.41
SHF-211ENST00000561278 OVOS2Q6IE36 1432 aa17.58■□□□□ 0.41
SHF-211ENST00000561278 USP31Q70CQ4 1352 aa17.58■□□□□ 0.4
SHF-211ENST00000561278 USP47Q96K76 1375 aa17.58■□□□□ 0.4
SHF-211ENST00000561278 EZH2Q15910 746 aaKnown RBP17.58■□□□□ 0.4
SHF-211ENST00000561278 DDB1Q16531 1140 aa17.58■□□□□ 0.4
SHF-211ENST00000561278 TESK2Q96S53 571 aa17.58■□□□□ 0.4
SHF-211ENST00000561278 PCGF6Q9BYE7 350 aa17.58■□□□□ 0.4
SHF-211ENST00000561278 RGPD5Q99666 1765 aa17.58■□□□□ 0.4
SHF-211ENST00000561278 ABCC6O95255 1503 aa17.57■□□□□ 0.4
SHF-211ENST00000561278 NINLQ9Y2I6 1382 aa17.57■□□□□ 0.4
SHF-211ENST00000561278 PUS7Q96PZ0 661 aaKnown RBP17.56■□□□□ 0.4
SHF-211ENST00000561278 SLC24A1O60721 1099 aa17.55■□□□□ 0.4
SHF-211ENST00000561278 LTN1O94822 1766 aa17.55■□□□□ 0.4
SHF-211ENST00000561278 CARD10Q9BWT7 1032 aa17.54■□□□□ 0.4
SHF-211ENST00000561278 PARD3Q8TEW0 1356 aa17.53■□□□□ 0.4
SHF-211ENST00000561278 C11orf95C9JLR9 678 aaPredicted RBP17.53■□□□□ 0.4
SHF-211ENST00000561278 TMF1P82094 1093 aa17.53■□□□□ 0.4
SHF-211ENST00000561278 R3HDM1Q15032 1099 aaKnown RBP17.53■□□□□ 0.4
SHF-211ENST00000561278 CAMKK2Q96RR4 588 aa17.53■□□□□ 0.4
SHF-211ENST00000561278 CDCA7Q9BWT1 371 aaPredicted RBP17.53■□□□□ 0.4
SHF-211ENST00000561278 CCDC7Q96M83 1385 aa17.53■□□□□ 0.4
SHF-211ENST00000561278 NLRP2Q9NX02 1062 aa17.52■□□□□ 0.4
SHF-211ENST00000561278 PEAK1Q9H792 1746 aa17.52■□□□□ 0.39
SHF-211ENST00000561278 ERBB3P21860 1342 aa17.51■□□□□ 0.39
SHF-211ENST00000561278 RREB1Q92766 1687 aa17.51■□□□□ 0.39
SHF-211ENST00000561278 ANKRD36BQ8N2N9 1353 aa17.51■□□□□ 0.39
SHF-211ENST00000561278 LRP5O75197 1615 aa17.5■□□□□ 0.39
SHF-211ENST00000561278 COG3Q96JB2 828 aa17.5■□□□□ 0.39
SHF-211ENST00000561278 ANKRD24Q8TF21 1146 aa17.49■□□□□ 0.39
SHF-211ENST00000561278 NUP188Q5SRE5 1749 aa17.49■□□□□ 0.39
SHF-211ENST00000561278 TNS2Q63HR2 1409 aa17.48■□□□□ 0.39
SHF-211ENST00000561278 EXOC5O00471 708 aa17.48■□□□□ 0.39
SHF-211ENST00000561278 MARCH10Q8NA82 808 aaPredicted RBP17.48■□□□□ 0.39
SHF-211ENST00000561278 CLSPNQ9HAW4 1339 aa17.47■□□□□ 0.39
SHF-211ENST00000561278 CDCA8Q53HL2 280 aa17.47■□□□□ 0.39
SHF-211ENST00000561278 NBPF14Q5TI25 921 aa17.46■□□□□ 0.39
SHF-211ENST00000561278 LTV1Q96GA3 475 aaPredicted RBP17.46■□□□□ 0.39
SHF-211ENST00000561278 TIMELESSQ9UNS1 1208 aa17.46■□□□□ 0.39
SHF-211ENST00000561278 SBF2Q86WG5 1849 aa17.45■□□□□ 0.38
SHF-211ENST00000561278 IL2RBP14784 551 aa17.45■□□□□ 0.38
SHF-211ENST00000561278 AMPHP49418 695 aa17.44■□□□□ 0.38
SHF-211ENST00000561278 BCL11BQ9C0K0 894 aaPredicted RBP17.44■□□□□ 0.38
SHF-211ENST00000561278 FAM208AQ9UK61 1670 aaKnown RBP17.43■□□□□ 0.38
SHF-211ENST00000561278 PTF1AQ7RTS3 328 aa17.43■□□□□ 0.38
SHF-211ENST00000561278 CCER1Q8TC90 406 aaPredicted RBP17.43■□□□□ 0.38
SHF-211ENST00000561278 IP6K1Q92551 441 aa17.43■□□□□ 0.38
SHF-211ENST00000561278 GGNBP2Q9H3C7 697 aa17.43■□□□□ 0.38
SHF-211ENST00000561278 MAP3K19Q56UN5 1328 aa17.43■□□□□ 0.38
SHF-211ENST00000561278 RGPD3A6NKT7 1758 aaPredicted RBP17.43■□□□□ 0.38
SHF-211ENST00000561278 RGPD4Q7Z3J3 1758 aa17.43■□□□□ 0.38
SHF-211ENST00000561278 BCL9O00512 1426 aa17.42■□□□□ 0.38
SHF-211ENST00000561278 FBLN1P23142 703 aa17.41■□□□□ 0.38
SHF-211ENST00000561278 HOXC9P31274 260 aa17.41■□□□□ 0.38
SHF-211ENST00000561278 KIF20BQ96Q89 1820 aa17.41■□□□□ 0.38
SHF-211ENST00000561278 MYOM1P52179 1685 aa17.41■□□□□ 0.38
SHF-211ENST00000561278 PLSCR1O15162 318 aa17.4■□□□□ 0.38
SHF-211ENST00000561278 RRS1Q15050 365 aaKnown RBP17.4■□□□□ 0.38
SHF-211ENST00000561278 ACSBG1Q96GR2 724 aa17.4■□□□□ 0.38
SHF-211ENST00000561278 POLR3GLQ9BT43 218 aa17.4■□□□□ 0.38
SHF-211ENST00000561278 FYB1O15117 783 aa17.39■□□□□ 0.37
SHF-211ENST00000561278 RTL1A6NKG5 1358 aa17.39■□□□□ 0.37
SHF-211ENST00000561278 NHSQ6T4R5 1651 aa17.39■□□□□ 0.37
SHF-211ENST00000561278 NSD3Q9BZ95 1437 aa17.38■□□□□ 0.37
SHF-211ENST00000561278 SMG6Q86US8 1419 aaKnown RBP17.38■□□□□ 0.37
SHF-211ENST00000561278 KCNQ2O43526 872 aa17.37■□□□□ 0.37
SHF-211ENST00000561278 DDX54Q8TDD1 881 aaKnown RBP17.35■□□□□ 0.37
SHF-211ENST00000561278 ANO8Q9HCE9 1232 aaPredicted RBP17.35■□□□□ 0.37
SHF-211ENST00000561278 TXNRD1Q16881 649 aa17.34■□□□□ 0.37
SHF-211ENST00000561278 RGPD2P0DJD1 1756 aa17.33■□□□□ 0.37
SHF-211ENST00000561278 MEGF6O75095 1541 aa17.32■□□□□ 0.36
SHF-211ENST00000561278 FLT4P35916 1363 aa17.32■□□□□ 0.36
SHF-211ENST00000561278 EIF4G2P78344 907 aaKnown RBP eCLIP17.32■□□□□ 0.36
SHF-211ENST00000561278 PROM2Q8N271 834 aa17.32■□□□□ 0.36
SHF-211ENST00000561278 USHBP1Q8N6Y0 703 aa17.32■□□□□ 0.36
SHF-211ENST00000561278 CARD14Q9BXL6 1004 aa17.32■□□□□ 0.36
SHF-211ENST00000561278 PPP1R1BQ9UD71 204 aaPredicted RBP17.32■□□□□ 0.36
SHF-211ENST00000561278 SYTL4Q96C24 671 aaPredicted RBP17.31■□□□□ 0.36
SHF-211ENST00000561278 SPON1Q9HCB6 807 aa17.31■□□□□ 0.36
SHF-211ENST00000561278 STK32BQ9NY57 414 aa17.31■□□□□ 0.36
SHF-211ENST00000561278 BTAF1O14981 1849 aa17.31■□□□□ 0.36
SHF-211ENST00000561278 CGNL1Q0VF96 1302 aa17.3■□□□□ 0.36
SHF-211ENST00000561278 PPM1GO15355 546 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms