RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 MYBBP1AQ9BQG0 1328 aaKnown RBP7.46□□□□□ -1.21
ZEB1-219ENST00000560721 SCN7AQ01118 1682 aa7.46□□□□□ -1.21
ZEB1-219ENST00000560721 ST20-MTHFSA0A0A6YYL1 179 aa7.46□□□□□ -1.22
ZEB1-219ENST00000560721 CDCA7Q9BWT1 371 aaPredicted RBP7.46□□□□□ -1.22
ZEB1-219ENST00000560721 STAG3Q9UJ98 1225 aa7.46□□□□□ -1.22
ZEB1-219ENST00000560721 TNS2Q63HR2 1409 aa7.46□□□□□ -1.22
ZEB1-219ENST00000560721 SUPT16HQ9Y5B9 1047 aaKnown RBP7.45□□□□□ -1.22
ZEB1-219ENST00000560721 IL16Q14005 1332 aa7.45□□□□□ -1.22
ZEB1-219ENST00000560721 HDGFL2Q7Z4V5 671 aaPredicted RBP7.45□□□□□ -1.22
ZEB1-219ENST00000560721 DLEC1Q9Y238 1755 aa7.45□□□□□ -1.22
ZEB1-219ENST00000560721 MAP3K19Q56UN5 1328 aa7.44□□□□□ -1.22
ZEB1-219ENST00000560721 BRINP3Q76B58 766 aa7.43□□□□□ -1.22
ZEB1-219ENST00000560721 PHF8Q9UPP1 1060 aa7.43□□□□□ -1.22
ZEB1-219ENST00000560721 DDX60Q8IY21 1712 aaKnown RBP7.43□□□□□ -1.22
ZEB1-219ENST00000560721 DOT1LQ8TEK3 1739 aa7.43□□□□□ -1.22
ZEB1-219ENST00000560721 CASZ1Q86V15 1759 aa7.43□□□□□ -1.22
ZEB1-219ENST00000560721 BRWD3Q6RI45 1802 aa7.43□□□□□ -1.22
ZEB1-219ENST00000560721 PXDNLA1KZ92 1463 aa7.43□□□□□ -1.22
ZEB1-219ENST00000560721 TOM1O60784 492 aa7.43□□□□□ -1.22
ZEB1-219ENST00000560721 BARGINQ6ZT62 677 aa7.43□□□□□ -1.22
ZEB1-219ENST00000560721 KLHL34Q8N239 644 aa7.43□□□□□ -1.22
ZEB1-219ENST00000560721 IGSF1Q8N6C5 1336 aa7.43□□□□□ -1.22
ZEB1-219ENST00000560721 FBXO41Q8TF61 875 aa7.42□□□□□ -1.22
ZEB1-219ENST00000560721 PNNQ9H307 717 aaKnown RBP7.42□□□□□ -1.22
ZEB1-219ENST00000560721 CRB1P82279 1406 aa7.42□□□□□ -1.22
ZEB1-219ENST00000560721 FNBP4Q8N3X1 1017 aaPredicted RBP7.42□□□□□ -1.22
ZEB1-219ENST00000560721 RIC1Q4ADV7 1423 aa7.42□□□□□ -1.22
ZEB1-219ENST00000560721 MAP3K5Q99683 1374 aa7.42□□□□□ -1.22
ZEB1-219ENST00000560721 LRP5O75197 1615 aa7.41□□□□□ -1.22
ZEB1-219ENST00000560721 CARD14Q9BXL6 1004 aa7.41□□□□□ -1.22
ZEB1-219ENST00000560721 SLAIN2Q9P270 581 aa7.41□□□□□ -1.22
ZEB1-219ENST00000560721 ACEP12821 1306 aa7.41□□□□□ -1.22
ZEB1-219ENST00000560721 BRPF1P55201 1214 aaPredicted RBP7.41□□□□□ -1.22
ZEB1-219ENST00000560721 MLECQ14165 292 aa7.41□□□□□ -1.22
ZEB1-219ENST00000560721 NKX1-1Q15270 411 aaPredicted RBP7.41□□□□□ -1.22
ZEB1-219ENST00000560721 HEG1Q9ULI3 1381 aa7.41□□□□□ -1.22
ZEB1-219ENST00000560721 ERBB3P21860 1342 aa7.4□□□□□ -1.22
ZEB1-219ENST00000560721 ZNF335Q9H4Z2 1342 aaPredicted RBP7.4□□□□□ -1.22
ZEB1-219ENST00000560721 CEMIPQ8WUJ3 1361 aa7.4□□□□□ -1.22
ZEB1-219ENST00000560721 LRRC59Q96AG4 307 aaKnown RBP7.4□□□□□ -1.22
ZEB1-219ENST00000560721 BCL9LQ86UU0 1499 aa7.4□□□□□ -1.22
ZEB1-219ENST00000560721 ZNF521Q96K83 1311 aa7.4□□□□□ -1.23
ZEB1-219ENST00000560721 CT47B1P0C2W7 299 aaPredicted RBP7.4□□□□□ -1.23
ZEB1-219ENST00000560721 ARHGEF25Q86VW2 580 aa7.39□□□□□ -1.23
ZEB1-219ENST00000560721 NLRP13Q86W25 1043 aa7.39□□□□□ -1.23
ZEB1-219ENST00000560721 PROSER2Q86WR7 435 aaPredicted RBP7.39□□□□□ -1.23
ZEB1-219ENST00000560721 KIAA1551Q9HCM1 1747 aa7.39□□□□□ -1.23
ZEB1-219ENST00000560721 LRRC37AA6NMS7 1700 aa7.39□□□□□ -1.23
ZEB1-219ENST00000560721 FYB1O15117 783 aa7.39□□□□□ -1.23
ZEB1-219ENST00000560721 PLEKHG5O94827 1062 aa7.39□□□□□ -1.23
ZEB1-219ENST00000560721 IP6K1Q92551 441 aa7.39□□□□□ -1.23
ZEB1-219ENST00000560721 KCPQ6ZWJ8 1503 aa7.38□□□□□ -1.23
ZEB1-219ENST00000560721 ATF3P18847 181 aa7.38□□□□□ -1.23
ZEB1-219ENST00000560721 PRKRIP1Q9H875 184 aaPredicted RBP7.38□□□□□ -1.23
ZEB1-219ENST00000560721 BTAF1O14981 1849 aa7.38□□□□□ -1.23
ZEB1-219ENST00000560721 POGKQ9P215 609 aa7.37□□□□□ -1.23
ZEB1-219ENST00000560721 COL15A1P39059 1388 aa7.37□□□□□ -1.23
ZEB1-219ENST00000560721 TRMT2AQ8IZ69 625 aaKnown RBP7.37□□□□□ -1.23
ZEB1-219ENST00000560721 ZNF428Q96B54 188 aa7.37□□□□□ -1.23
ZEB1-219ENST00000560721 PDE3BQ13370 1112 aa7.37□□□□□ -1.23
ZEB1-219ENST00000560721 TUBGCP6Q96RT7 1819 aa7.36□□□□□ -1.23
ZEB1-219ENST00000560721 KIAA0232Q92628 1395 aa7.36□□□□□ -1.23
ZEB1-219ENST00000560721 A0A1B0GUL6 1792 aa7.36□□□□□ -1.23
ZEB1-219ENST00000560721 EIF5BO60841 1220 aaKnown RBP7.36□□□□□ -1.23
ZEB1-219ENST00000560721 ATP10DQ9P241 1426 aa7.36□□□□□ -1.23
ZEB1-219ENST00000560721 ARAP2Q8WZ64 1704 aa7.35□□□□□ -1.23
ZEB1-219ENST00000560721 UBR3Q6ZT12 1888 aa7.35□□□□□ -1.23
ZEB1-219ENST00000560721 TSHZ2Q9NRE2 1034 aa7.35□□□□□ -1.23
ZEB1-219ENST00000560721 LAMB1P07942 1786 aa7.35□□□□□ -1.23
ZEB1-219ENST00000560721 TRAK1Q9UPV9 953 aa7.35□□□□□ -1.23
ZEB1-219ENST00000560721 RGL3Q3MIN7 710 aa7.34□□□□□ -1.23
ZEB1-219ENST00000560721 PLEKHF1Q96S99 279 aa7.34□□□□□ -1.23
ZEB1-219ENST00000560721 FCHSD2O94868 740 aa7.34□□□□□ -1.23
ZEB1-219ENST00000560721 IL13P35225 146 aa7.34□□□□□ -1.23
ZEB1-219ENST00000560721 VPS72Q15906 364 aa7.34□□□□□ -1.23
ZEB1-219ENST00000560721 CARD10Q9BWT7 1032 aa7.34□□□□□ -1.23
ZEB1-219ENST00000560721 HOXB7P09629 217 aa7.34□□□□□ -1.23
ZEB1-219ENST00000560721 TMEM132EQ6IEE7 984 aa7.34□□□□□ -1.23
ZEB1-219ENST00000560721 WDR17Q8IZU2 1322 aa7.34□□□□□ -1.24
ZEB1-219ENST00000560721 CHMP4AQ9BY43 222 aa7.33□□□□□ -1.24
ZEB1-219ENST00000560721 WAPLQ7Z5K2 1190 aa7.33□□□□□ -1.24
ZEB1-219ENST00000560721 PODXL2Q9NZ53 605 aa7.33□□□□□ -1.24
ZEB1-219ENST00000560721 RNF123Q5XPI4 1314 aa7.33□□□□□ -1.24
ZEB1-219ENST00000560721 PPP2R1AP30153 589 aa7.33□□□□□ -1.24
ZEB1-219ENST00000560721 AAMPQ13685 434 aa7.33□□□□□ -1.24
ZEB1-219ENST00000560721 SLC26A8Q96RN1 970 aa7.33□□□□□ -1.24
ZEB1-219ENST00000560721 TPRNQ4KMQ1 711 aa7.32□□□□□ -1.24
ZEB1-219ENST00000560721 KRT28Q7Z3Y7 464 aa7.32□□□□□ -1.24
ZEB1-219ENST00000560721 PANK3Q9H999 370 aa7.32□□□□□ -1.24
ZEB1-219ENST00000560721 ERBB4Q15303 1308 aa7.32□□□□□ -1.24
ZEB1-219ENST00000560721 SPATA31A5Q5VU36 1347 aa7.31□□□□□ -1.24
ZEB1-219ENST00000560721 SPATA31A7Q8IWB4 1347 aa7.31□□□□□ -1.24
ZEB1-219ENST00000560721 AMOTQ4VCS5 1084 aa7.31□□□□□ -1.24
ZEB1-219ENST00000560721 WDR63Q8IWG1 891 aa7.31□□□□□ -1.24
ZEB1-219ENST00000560721 PNISRQ8TF01 805 aaKnown RBP7.31□□□□□ -1.24
ZEB1-219ENST00000560721 CABP1Q9NZU7 370 aa7.31□□□□□ -1.24
ZEB1-219ENST00000560721 KNSTRNQ9Y448 316 aa7.31□□□□□ -1.24
ZEB1-219ENST00000560721 POLKQ9UBT6 870 aa7.3□□□□□ -1.24
ZEB1-219ENST00000560721 COG3Q96JB2 828 aa7.3□□□□□ -1.24
ZEB1-219ENST00000560721 HOXC9P31274 260 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms