RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 NFAT5O94916 1531 aa17.98■□□□□ 0.47
CTDSPL2-209ENST00000560620 TCP11L2Q8N4U5 519 aa17.98■□□□□ 0.47
CTDSPL2-209ENST00000560620 CRB1P82279 1406 aa17.97■□□□□ 0.47
CTDSPL2-209ENST00000560620 RGPD5Q99666 1765 aa17.96■□□□□ 0.47
CTDSPL2-209ENST00000560620 SF3B2Q13435 895 aaKnown RBP17.96■□□□□ 0.47
CTDSPL2-209ENST00000560620 GGNBP2Q9H3C7 697 aa17.96■□□□□ 0.47
CTDSPL2-209ENST00000560620 THRAP3Q9Y2W1 955 aaKnown RBP17.96■□□□□ 0.47
CTDSPL2-209ENST00000560620 EP400Q96L91 3159 aa17.96■□□□□ 0.47
CTDSPL2-209ENST00000560620 OVOS2A0A0J9YW53 1432 aa17.96■□□□□ 0.47
CTDSPL2-209ENST00000560620 OVOS2Q6IE36 1432 aa17.96■□□□□ 0.47
CTDSPL2-209ENST00000560620 USP54Q70EL1 1684 aa17.96■□□□□ 0.47
CTDSPL2-209ENST00000560620 LTN1O94822 1766 aa17.95■□□□□ 0.46
CTDSPL2-209ENST00000560620 COL18A1P39060 1754 aa17.95■□□□□ 0.46
CTDSPL2-209ENST00000560620 FAM182BQ5T319 152 aa17.95■□□□□ 0.46
CTDSPL2-209ENST00000560620 BARGINQ6ZT62 677 aa17.95■□□□□ 0.46
CTDSPL2-209ENST00000560620 MYOM1P52179 1685 aa17.95■□□□□ 0.46
CTDSPL2-209ENST00000560620 WDR17Q8IZU2 1322 aa17.95■□□□□ 0.46
CTDSPL2-209ENST00000560620 PDE3BQ13370 1112 aa17.94■□□□□ 0.46
CTDSPL2-209ENST00000560620 CCDC125Q86Z20 511 aa17.94■□□□□ 0.46
CTDSPL2-209ENST00000560620 THSD7AQ9UPZ6 1657 aa17.93■□□□□ 0.46
CTDSPL2-209ENST00000560620 NSD3Q9BZ95 1437 aa17.93■□□□□ 0.46
CTDSPL2-209ENST00000560620 FYB1O15117 783 aa17.93■□□□□ 0.46
CTDSPL2-209ENST00000560620 AMPHP49418 695 aa17.92■□□□□ 0.46
CTDSPL2-209ENST00000560620 CARD14Q9BXL6 1004 aa17.91■□□□□ 0.46
CTDSPL2-209ENST00000560620 NLRP2Q9NX02 1062 aa17.91■□□□□ 0.46
CTDSPL2-209ENST00000560620 KIF20BQ96Q89 1820 aa17.91■□□□□ 0.46
CTDSPL2-209ENST00000560620 BLMP54132 1417 aaPredicted RBP17.9■□□□□ 0.46
CTDSPL2-209ENST00000560620 ABCC6O95255 1503 aa17.9■□□□□ 0.46
CTDSPL2-209ENST00000560620 FBLN1P23142 703 aa17.9■□□□□ 0.46
CTDSPL2-209ENST00000560620 ANKRD24Q8TF21 1146 aa17.89■□□□□ 0.45
CTDSPL2-209ENST00000560620 LTV1Q96GA3 475 aaPredicted RBP17.89■□□□□ 0.45
CTDSPL2-209ENST00000560620 RRS1Q15050 365 aaKnown RBP17.88■□□□□ 0.45
CTDSPL2-209ENST00000560620 IP6K1Q92551 441 aa17.88■□□□□ 0.45
CTDSPL2-209ENST00000560620 CARD10Q9BWT7 1032 aa17.88■□□□□ 0.45
CTDSPL2-209ENST00000560620 ERBB3P21860 1342 aa17.88■□□□□ 0.45
CTDSPL2-209ENST00000560620 CGNL1Q0VF96 1302 aa17.88■□□□□ 0.45
CTDSPL2-209ENST00000560620 MAP3K19Q56UN5 1328 aa17.88■□□□□ 0.45
CTDSPL2-209ENST00000560620 DDB1Q16531 1140 aa17.87■□□□□ 0.45
CTDSPL2-209ENST00000560620 FAM196AQ6ZSG2 479 aa17.87■□□□□ 0.45
CTDSPL2-209ENST00000560620 C11orf95C9JLR9 678 aaPredicted RBP17.86■□□□□ 0.45
CTDSPL2-209ENST00000560620 CDCA7Q9BWT1 371 aaPredicted RBP17.86■□□□□ 0.45
CTDSPL2-209ENST00000560620 PANK3Q9H999 370 aa17.86■□□□□ 0.45
CTDSPL2-209ENST00000560620 CCDC7Q96M83 1385 aa17.86■□□□□ 0.45
CTDSPL2-209ENST00000560620 HOXC9P31274 260 aa17.85■□□□□ 0.45
CTDSPL2-209ENST00000560620 DEFB132Q7Z7B7 95 aa17.85■□□□□ 0.45
CTDSPL2-209ENST00000560620 PARP4Q9UKK3 1724 aaKnown RBP17.85■□□□□ 0.45
CTDSPL2-209ENST00000560620 BAG6P46379 1132 aa17.84■□□□□ 0.45
CTDSPL2-209ENST00000560620 PPM1GO15355 546 aaPredicted RBP17.83■□□□□ 0.44
CTDSPL2-209ENST00000560620 TRIM37O94972 964 aa17.83■□□□□ 0.44
CTDSPL2-209ENST00000560620 WNK3Q9BYP7 1800 aa17.82■□□□□ 0.44
CTDSPL2-209ENST00000560620 EXOC5O00471 708 aa17.82■□□□□ 0.44
CTDSPL2-209ENST00000560620 TNNT2P45379 298 aaPredicted RBP17.82■□□□□ 0.44
CTDSPL2-209ENST00000560620 LRRC37A3O60309 1634 aa17.82■□□□□ 0.44
CTDSPL2-209ENST00000560620 RGPD1P0DJD0 1748 aa17.81■□□□□ 0.44
CTDSPL2-209ENST00000560620 KIF7Q2M1P5 1343 aa17.81■□□□□ 0.44
CTDSPL2-209ENST00000560620 SMG6Q86US8 1419 aaKnown RBP17.81■□□□□ 0.44
CTDSPL2-209ENST00000560620 RTL1A6NKG5 1358 aa17.8■□□□□ 0.44
CTDSPL2-209ENST00000560620 IL2RBP14784 551 aa17.8■□□□□ 0.44
CTDSPL2-209ENST00000560620 KNSTRNQ9Y448 316 aa17.8■□□□□ 0.44
CTDSPL2-209ENST00000560620 OVOS2A0A0G2JMS6 1433 aa17.8■□□□□ 0.44
CTDSPL2-209ENST00000560620 FAM208AQ9UK61 1670 aaKnown RBP17.78■□□□□ 0.44
CTDSPL2-209ENST00000560620 APBA3O96018 575 aa17.78■□□□□ 0.44
CTDSPL2-209ENST00000560620 EN1Q05925 392 aaPredicted RBP17.78■□□□□ 0.44
CTDSPL2-209ENST00000560620 EMILIN1Q9Y6C2 1016 aa17.78■□□□□ 0.44
CTDSPL2-209ENST00000560620 FLT4P35916 1363 aa17.78■□□□□ 0.44
CTDSPL2-209ENST00000560620 HSP90AB2PQ58FF8 381 aa17.77■□□□□ 0.44
CTDSPL2-209ENST00000560620 DISP2A7MBM2 1401 aa17.77■□□□□ 0.44
CTDSPL2-209ENST00000560620 MARCH10Q8NA82 808 aaPredicted RBP17.76■□□□□ 0.43
CTDSPL2-209ENST00000560620 MORC1Q86VD1 984 aa17.75■□□□□ 0.43
CTDSPL2-209ENST00000560620 TNS1Q9HBL0 1735 aaKnown RBP17.75■□□□□ 0.43
CTDSPL2-209ENST00000560620 ANKRD26Q9UPS8 1709 aa17.75■□□□□ 0.43
CTDSPL2-209ENST00000560620 TNS2Q63HR2 1409 aa17.74■□□□□ 0.43
CTDSPL2-209ENST00000560620 RGPD2P0DJD1 1756 aa17.74■□□□□ 0.43
CTDSPL2-209ENST00000560620 USHBP1Q8N6Y0 703 aa17.74■□□□□ 0.43
CTDSPL2-209ENST00000560620 INSRP06213 1382 aa17.74■□□□□ 0.43
CTDSPL2-209ENST00000560620 KIF24Q5T7B8 1368 aa17.74■□□□□ 0.43
CTDSPL2-209ENST00000560620 MAP2P11137 1827 aaKnown RBP17.74■□□□□ 0.43
CTDSPL2-209ENST00000560620 PEAK1Q9H792 1746 aa17.73■□□□□ 0.43
CTDSPL2-209ENST00000560620 NBPF6Q5VWK0 638 aa17.73■□□□□ 0.43
CTDSPL2-209ENST00000560620 DDX54Q8TDD1 881 aaKnown RBP17.73■□□□□ 0.43
CTDSPL2-209ENST00000560620 NBPF4Q96M43 638 aa17.73■□□□□ 0.43
CTDSPL2-209ENST00000560620 NSD2O96028 1365 aa17.73■□□□□ 0.43
CTDSPL2-209ENST00000560620 CNGB1Q14028 1251 aaPredicted RBP17.72■□□□□ 0.43
CTDSPL2-209ENST00000560620 EZH2Q15910 746 aaKnown RBP17.72■□□□□ 0.43
CTDSPL2-209ENST00000560620 RAPGEF4Q8WZA2 1011 aa17.72■□□□□ 0.43
CTDSPL2-209ENST00000560620 POLKQ9UBT6 870 aa17.71■□□□□ 0.43
CTDSPL2-209ENST00000560620 WASHC2AQ641Q2 1341 aa17.71■□□□□ 0.42
CTDSPL2-209ENST00000560620 TATP17735 454 aaPredicted RBP17.69■□□□□ 0.42
CTDSPL2-209ENST00000560620 ACSBG1Q96GR2 724 aa17.69■□□□□ 0.42
CTDSPL2-209ENST00000560620 BCL11BQ9C0K0 894 aaPredicted RBP17.69■□□□□ 0.42
CTDSPL2-209ENST00000560620 SBF2Q86WG5 1849 aa17.69■□□□□ 0.42
CTDSPL2-209ENST00000560620 KAT6BQ8WYB5 2073 aa17.67■□□□□ 0.42
CTDSPL2-209ENST00000560620 CC2D1BQ5T0F9 858 aaKnown RBP17.67■□□□□ 0.42
CTDSPL2-209ENST00000560620 ZCRB1Q8TBF4 217 aaKnown RBP17.67■□□□□ 0.42
CTDSPL2-209ENST00000560620 CAMKK2Q96RR4 588 aa17.67■□□□□ 0.42
CTDSPL2-209ENST00000560620 PTF1AQ7RTS3 328 aa17.66■□□□□ 0.42
CTDSPL2-209ENST00000560620 MEGF6O75095 1541 aa17.66■□□□□ 0.42
CTDSPL2-209ENST00000560620 PARD3Q8TEW0 1356 aa17.66■□□□□ 0.42
CTDSPL2-209ENST00000560620 BCL9O00512 1426 aa17.65■□□□□ 0.42
CTDSPL2-209ENST00000560620 PSDA5PKW4 1024 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms