RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 FRAT1Q92837 279 aaPredicted RBP24.6■■□□□ 1.53
HMBOX1-215ENST00000560599 ARHGEF10O15013 1369 aa24.59■■□□□ 1.53
HMBOX1-215ENST00000560599 FLT4P35916 1363 aa24.58■■□□□ 1.53
HMBOX1-215ENST00000560599 EIF4A2Q14240 407 aaKnown RBP24.58■■□□□ 1.53
HMBOX1-215ENST00000560599 KIF24Q5T7B8 1368 aa24.57■■□□□ 1.52
HMBOX1-215ENST00000560599 MARF1Q9Y4F3 1742 aaKnown RBP24.56■■□□□ 1.52
HMBOX1-215ENST00000560599 ZKSCAN2Q63HK3 967 aa24.56■■□□□ 1.52
HMBOX1-215ENST00000560599 PANK1Q8TE04 598 aa24.56■■□□□ 1.52
HMBOX1-215ENST00000560599 CLUAP1Q96AJ1 413 aa24.56■■□□□ 1.52
HMBOX1-215ENST00000560599 ZNF428Q96B54 188 aa24.56■■□□□ 1.52
HMBOX1-215ENST00000560599 PHACTR3Q96KR7 559 aa24.56■■□□□ 1.52
HMBOX1-215ENST00000560599 IFT57Q9NWB7 429 aa24.56■■□□□ 1.52
HMBOX1-215ENST00000560599 DLG5Q8TDM6 1919 aa24.55■■□□□ 1.52
HMBOX1-215ENST00000560599 SMC4Q9NTJ3 1288 aa24.55■■□□□ 1.52
HMBOX1-215ENST00000560599 COG6Q9Y2V7 657 aa24.54■■□□□ 1.52
HMBOX1-215ENST00000560599 KIF16BQ96L93 1317 aa24.54■■□□□ 1.52
HMBOX1-215ENST00000560599 GNAI1P63096 354 aa24.53■■□□□ 1.52
HMBOX1-215ENST00000560599 ALDH1L2Q3SY69 923 aa24.52■■□□□ 1.52
HMBOX1-215ENST00000560599 BCL2L13Q9BXK5 485 aa24.52■■□□□ 1.52
HMBOX1-215ENST00000560599 MAP3K19Q56UN5 1328 aa24.52■■□□□ 1.52
HMBOX1-215ENST00000560599 PHF8Q9UPP1 1060 aa24.51■■□□□ 1.51
HMBOX1-215ENST00000560599 FTSJ3Q8IY81 847 aaKnown RBP24.5■■□□□ 1.51
HMBOX1-215ENST00000560599 DZIP1LQ8IYY4 767 aaKnown RBP24.5■■□□□ 1.51
HMBOX1-215ENST00000560599 RTL1A6NKG5 1358 aa24.49■■□□□ 1.51
HMBOX1-215ENST00000560599 SULT6B1Q6IMI4 303 aa24.49■■□□□ 1.51
HMBOX1-215ENST00000560599 SSH1Q8WYL5 1049 aa24.49■■□□□ 1.51
HMBOX1-215ENST00000560599 ZNF853P0CG23 659 aa24.48■■□□□ 1.51
HMBOX1-215ENST00000560599 MVPQ14764 893 aaKnown RBP24.48■■□□□ 1.51
HMBOX1-215ENST00000560599 IPO8O15397 1037 aaKnown RBP24.47■■□□□ 1.51
HMBOX1-215ENST00000560599 HSP90AB2PQ58FF8 381 aa24.47■■□□□ 1.51
HMBOX1-215ENST00000560599 RLBP1P12271 317 aa24.46■■□□□ 1.51
HMBOX1-215ENST00000560599 AMPHP49418 695 aa24.46■■□□□ 1.51
HMBOX1-215ENST00000560599 BRPF1P55201 1214 aaPredicted RBP24.45■■□□□ 1.51
HMBOX1-215ENST00000560599 NLRP6P59044 892 aa24.45■■□□□ 1.51
HMBOX1-215ENST00000560599 KDRP35968 1356 aa24.45■■□□□ 1.5
HMBOX1-215ENST00000560599 PDE4AP27815 886 aa24.44■■□□□ 1.5
HMBOX1-215ENST00000560599 ATF7IPQ6VMQ6 1270 aa24.44■■□□□ 1.5
HMBOX1-215ENST00000560599 AEBP1Q8IUX7 1158 aa24.44■■□□□ 1.5
HMBOX1-215ENST00000560599 LAS1LQ9Y4W2 734 aaKnown RBP24.44■■□□□ 1.5
HMBOX1-215ENST00000560599 KIF1AQ12756 1690 aa24.44■■□□□ 1.5
HMBOX1-215ENST00000560599 SOX12O15370 315 aa24.44■■□□□ 1.5
HMBOX1-215ENST00000560599 ANP32AP39687 249 aaKnown RBP24.44■■□□□ 1.5
HMBOX1-215ENST00000560599 CFAP44Q96MT7 982 aa24.44■■□□□ 1.5
HMBOX1-215ENST00000560599 THUMPD2Q9BTF0 503 aaKnown RBP24.43■■□□□ 1.5
HMBOX1-215ENST00000560599 BACH2Q9BYV9 841 aa24.43■■□□□ 1.5
HMBOX1-215ENST00000560599 TNNQ9UQP3 1299 aa24.43■■□□□ 1.5
HMBOX1-215ENST00000560599 IGSF1Q8N6C5 1336 aa24.43■■□□□ 1.5
HMBOX1-215ENST00000560599 NFAT5O94916 1531 aa24.41■■□□□ 1.5
HMBOX1-215ENST00000560599 TRIM27P14373 513 aa24.41■■□□□ 1.5
HMBOX1-215ENST00000560599 MBIPQ9NS73 344 aa24.41■■□□□ 1.5
HMBOX1-215ENST00000560599 DDX19BQ9UMR2 479 aa24.41■■□□□ 1.5
HMBOX1-215ENST00000560599 PHRF1Q9P1Y6 1649 aaKnown RBP24.4■■□□□ 1.5
HMBOX1-215ENST00000560599 ABTB2Q8N961 1025 aa24.4■■□□□ 1.5
HMBOX1-215ENST00000560599 HAP1P54257 671 aaPredicted RBP24.39■■□□□ 1.5
HMBOX1-215ENST00000560599 NOB1Q9ULX3 412 aaKnown RBP24.39■■□□□ 1.5
HMBOX1-215ENST00000560599 PAK3O75914 559 aaPredicted RBP24.38■■□□□ 1.49
HMBOX1-215ENST00000560599 C14orf37Q86TY3 774 aa24.38■■□□□ 1.49
HMBOX1-215ENST00000560599 LTN1O94822 1766 aa24.38■■□□□ 1.49
HMBOX1-215ENST00000560599 IGHDP01880 384 aa24.37■■□□□ 1.49
HMBOX1-215ENST00000560599 HOXC9P31274 260 aa24.37■■□□□ 1.49
HMBOX1-215ENST00000560599 RWDD1Q9H446 243 aaPredicted RBP24.37■■□□□ 1.49
HMBOX1-215ENST00000560599 LRRC37A3O60309 1634 aa24.37■■□□□ 1.49
HMBOX1-215ENST00000560599 VAMP4O75379 141 aa24.36■■□□□ 1.49
HMBOX1-215ENST00000560599 GAS2L2Q8NHY3 880 aa24.35■■□□□ 1.49
HMBOX1-215ENST00000560599 ARHGAP45Q92619 1136 aa24.35■■□□□ 1.49
HMBOX1-215ENST00000560599 TWISTNBQ3B726 338 aaPredicted RBP24.35■■□□□ 1.49
HMBOX1-215ENST00000560599 ESCO1Q5FWF5 840 aa24.35■■□□□ 1.49
HMBOX1-215ENST00000560599 MRPL50Q8N5N7 158 aaKnown RBP24.35■■□□□ 1.49
HMBOX1-215ENST00000560599 CHMP4BQ9H444 224 aaKnown RBP24.35■■□□□ 1.49
HMBOX1-215ENST00000560599 SLIT3O75094 1523 aa24.34■■□□□ 1.49
HMBOX1-215ENST00000560599 FAM83GA6ND36 823 aa24.34■■□□□ 1.49
HMBOX1-215ENST00000560599 ITPRIPQ8IWB1 547 aa24.34■■□□□ 1.49
HMBOX1-215ENST00000560599 KIAA0232Q92628 1395 aa24.33■■□□□ 1.49
HMBOX1-215ENST00000560599 PSME1Q06323 249 aa24.33■■□□□ 1.49
HMBOX1-215ENST00000560599 EYA1Q99502 592 aa24.33■■□□□ 1.49
HMBOX1-215ENST00000560599 PCDHB15Q9Y5E8 787 aa24.33■■□□□ 1.49
HMBOX1-215ENST00000560599 TRPM3Q9HCF6 1732 aaPredicted RBP24.32■■□□□ 1.48
HMBOX1-215ENST00000560599 CRB1P82279 1406 aa24.32■■□□□ 1.48
HMBOX1-215ENST00000560599 MSH5O43196 834 aa24.32■■□□□ 1.48
HMBOX1-215ENST00000560599 FAM161AQ3B820 660 aa24.32■■□□□ 1.48
HMBOX1-215ENST00000560599 ERICH6Q7L0X2 663 aa24.32■■□□□ 1.48
HMBOX1-215ENST00000560599 SKAP1Q86WV1 359 aa24.32■■□□□ 1.48
HMBOX1-215ENST00000560599 KCNH5Q8NCM2 988 aa24.32■■□□□ 1.48
HMBOX1-215ENST00000560599 DCCP43146 1447 aa24.31■■□□□ 1.48
HMBOX1-215ENST00000560599 NUTM2GQ5VZR2 741 aa24.31■■□□□ 1.48
HMBOX1-215ENST00000560599 PROSER2Q86WR7 435 aaPredicted RBP24.31■■□□□ 1.48
HMBOX1-215ENST00000560599 TMEM57Q8N5G2 664 aa24.31■■□□□ 1.48
HMBOX1-215ENST00000560599 VIRMAQ69YN4 1812 aaKnown RBP24.31■■□□□ 1.48
HMBOX1-215ENST00000560599 NCOA3Q9Y6Q9 1424 aa24.3■■□□□ 1.48
HMBOX1-215ENST00000560599 HTATSF1O43719 755 aaKnown RBP24.3■■□□□ 1.48
HMBOX1-215ENST00000560599 DCTN1Q14203 1278 aa24.3■■□□□ 1.48
HMBOX1-215ENST00000560599 CHL1O00533 1208 aa24.29■■□□□ 1.48
HMBOX1-215ENST00000560599 RGS3P49796 1198 aa24.29■■□□□ 1.48
HMBOX1-215ENST00000560599 RTF1Q92541 710 aaKnown RBP24.29■■□□□ 1.48
HMBOX1-215ENST00000560599 RBM33Q96EV2 1170 aaKnown RBP24.29■■□□□ 1.48
HMBOX1-215ENST00000560599 C1orf167Q5SNV9 1468 aa24.29■■□□□ 1.48
HMBOX1-215ENST00000560599 TSPYL6Q8N831 410 aa24.28■■□□□ 1.48
HMBOX1-215ENST00000560599 API5Q9BZZ5 524 aaKnown RBP24.28■■□□□ 1.48
HMBOX1-215ENST00000560599 HDAC1Q13547 482 aaPredicted RBP24.27■■□□□ 1.48
HMBOX1-215ENST00000560599 IP6K1Q92551 441 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms