RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 PARP4Q9UKK3 1724 aaKnown RBP25.31■■□□□ 1.64
TNFAIP2-206ENST00000560428 DEFB132Q7Z7B7 95 aa25.29■■□□□ 1.64
TNFAIP2-206ENST00000560428 ZRANB1Q9UGI0 708 aa25.29■■□□□ 1.64
TNFAIP2-206ENST00000560428 FAM182BQ5T319 152 aa25.28■■□□□ 1.64
TNFAIP2-206ENST00000560428 NME9Q86XW9 330 aa25.28■■□□□ 1.64
TNFAIP2-206ENST00000560428 AXIN2Q9Y2T1 843 aa25.28■■□□□ 1.64
TNFAIP2-206ENST00000560428 WDR17Q8IZU2 1322 aa25.28■■□□□ 1.64
TNFAIP2-206ENST00000560428 RGPD5Q99666 1765 aa25.27■■□□□ 1.64
TNFAIP2-206ENST00000560428 SOX12O15370 315 aa25.27■■□□□ 1.64
TNFAIP2-206ENST00000560428 TMF1P82094 1093 aa25.27■■□□□ 1.64
TNFAIP2-206ENST00000560428 FAM196AQ6ZSG2 479 aa25.27■■□□□ 1.64
TNFAIP2-206ENST00000560428 TNS1Q9HBL0 1735 aaKnown RBP25.26■■□□□ 1.63
TNFAIP2-206ENST00000560428 BAG6P46379 1132 aa25.26■■□□□ 1.63
TNFAIP2-206ENST00000560428 PDE3BQ13370 1112 aa25.25■■□□□ 1.63
TNFAIP2-206ENST00000560428 TOM1L2Q6ZVM7 507 aa25.25■■□□□ 1.63
TNFAIP2-206ENST00000560428 OVOS2A0A0J9YW53 1432 aa25.25■■□□□ 1.63
TNFAIP2-206ENST00000560428 DISP2A7MBM2 1401 aa25.25■■□□□ 1.63
TNFAIP2-206ENST00000560428 OVOS2Q6IE36 1432 aa25.25■■□□□ 1.63
TNFAIP2-206ENST00000560428 WNK3Q9BYP7 1800 aa25.25■■□□□ 1.63
TNFAIP2-206ENST00000560428 ANKRD36BQ8N2N9 1353 aa25.23■■□□□ 1.63
TNFAIP2-206ENST00000560428 LTN1O94822 1766 aa25.23■■□□□ 1.63
TNFAIP2-206ENST00000560428 LRRC37A3O60309 1634 aa25.22■■□□□ 1.63
TNFAIP2-206ENST00000560428 CDCA8Q53HL2 280 aa25.21■■□□□ 1.63
TNFAIP2-206ENST00000560428 C11orf95C9JLR9 678 aaPredicted RBP25.19■■□□□ 1.62
TNFAIP2-206ENST00000560428 CDCA7Q9BWT1 371 aaPredicted RBP25.19■■□□□ 1.62
TNFAIP2-206ENST00000560428 CARD10Q9BWT7 1032 aa25.19■■□□□ 1.62
TNFAIP2-206ENST00000560428 CSB-PGBD3P0DP91 1061 aa25.18■■□□□ 1.62
TNFAIP2-206ENST00000560428 CCDC7Q96M83 1385 aa25.17■■□□□ 1.62
TNFAIP2-206ENST00000560428 TRIM37O94972 964 aa25.16■■□□□ 1.62
TNFAIP2-206ENST00000560428 CCER1Q8TC90 406 aaPredicted RBP25.16■■□□□ 1.62
TNFAIP2-206ENST00000560428 PEAK1Q9H792 1746 aa25.16■■□□□ 1.62
TNFAIP2-206ENST00000560428 OVOS2A0A0G2JMS6 1433 aa25.15■■□□□ 1.62
TNFAIP2-206ENST00000560428 EN1Q05925 392 aaPredicted RBP25.15■■□□□ 1.62
TNFAIP2-206ENST00000560428 DDB1Q16531 1140 aa25.15■■□□□ 1.62
TNFAIP2-206ENST00000560428 ERBB3P21860 1342 aa25.14■■□□□ 1.62
TNFAIP2-206ENST00000560428 COG3Q96JB2 828 aa25.13■■□□□ 1.61
TNFAIP2-206ENST00000560428 PARD3Q8TEW0 1356 aa25.13■■□□□ 1.61
TNFAIP2-206ENST00000560428 MYOM1P52179 1685 aa25.13■■□□□ 1.61
TNFAIP2-206ENST00000560428 SRCAPQ6ZRS2 3230 aa25.1■■□□□ 1.61
TNFAIP2-206ENST00000560428 APBA3O96018 575 aa25.09■■□□□ 1.61
TNFAIP2-206ENST00000560428 CAMKK2Q96RR4 588 aa25.09■■□□□ 1.61
TNFAIP2-206ENST00000560428 FAM208AQ9UK61 1670 aaKnown RBP25.09■■□□□ 1.61
TNFAIP2-206ENST00000560428 BCL9O00512 1426 aa25.09■■□□□ 1.61
TNFAIP2-206ENST00000560428 SBF2Q86WG5 1849 aa25.08■■□□□ 1.61
TNFAIP2-206ENST00000560428 ANKRD24Q8TF21 1146 aa25.08■■□□□ 1.61
TNFAIP2-206ENST00000560428 IP6K1Q92551 441 aa25.08■■□□□ 1.61
TNFAIP2-206ENST00000560428 KIF20BQ96Q89 1820 aa25.07■■□□□ 1.6
TNFAIP2-206ENST00000560428 RREB1Q92766 1687 aa25.07■■□□□ 1.6
TNFAIP2-206ENST00000560428 EZH2Q15910 746 aaKnown RBP25.07■■□□□ 1.6
TNFAIP2-206ENST00000560428 TNS2Q63HR2 1409 aa25.06■■□□□ 1.6
TNFAIP2-206ENST00000560428 FYB1O15117 783 aa25.06■■□□□ 1.6
TNFAIP2-206ENST00000560428 NLRP2Q9NX02 1062 aa25.06■■□□□ 1.6
TNFAIP2-206ENST00000560428 RGPD3A6NKT7 1758 aaPredicted RBP25.04■■□□□ 1.6
TNFAIP2-206ENST00000560428 RGPD4Q7Z3J3 1758 aa25.04■■□□□ 1.6
TNFAIP2-206ENST00000560428 EXOC5O00471 708 aa25.04■■□□□ 1.6
TNFAIP2-206ENST00000560428 MARCH10Q8NA82 808 aaPredicted RBP25.04■■□□□ 1.6
TNFAIP2-206ENST00000560428 MAP3K19Q56UN5 1328 aa25.04■■□□□ 1.6
TNFAIP2-206ENST00000560428 RTL1A6NKG5 1358 aa25.04■■□□□ 1.6
TNFAIP2-206ENST00000560428 GGNBP2Q9H3C7 697 aa25.02■■□□□ 1.6
TNFAIP2-206ENST00000560428 NUP188Q5SRE5 1749 aa25.01■■□□□ 1.59
TNFAIP2-206ENST00000560428 IL2RBP14784 551 aa25.01■■□□□ 1.59
TNFAIP2-206ENST00000560428 HOXC9P31274 260 aa25.01■■□□□ 1.59
TNFAIP2-206ENST00000560428 EIF4G2P78344 907 aaKnown RBP eCLIP25.01■■□□□ 1.59
TNFAIP2-206ENST00000560428 AMPHP49418 695 aa25■■□□□ 1.59
TNFAIP2-206ENST00000560428 LRP5O75197 1615 aa24.99■■□□□ 1.59
TNFAIP2-206ENST00000560428 CARD14Q9BXL6 1004 aa24.99■■□□□ 1.59
TNFAIP2-206ENST00000560428 NSD3Q9BZ95 1437 aa24.99■■□□□ 1.59
TNFAIP2-206ENST00000560428 BCL11BQ9C0K0 894 aaPredicted RBP24.99■■□□□ 1.59
TNFAIP2-206ENST00000560428 PSDA5PKW4 1024 aaPredicted RBP24.98■■□□□ 1.59
TNFAIP2-206ENST00000560428 PLSCR1O15162 318 aa24.97■■□□□ 1.59
TNFAIP2-206ENST00000560428 HSPA5P11021 654 aaKnown RBP24.96■■□□□ 1.59
TNFAIP2-206ENST00000560428 FBLN1P23142 703 aa24.96■■□□□ 1.59
TNFAIP2-206ENST00000560428 KIF24Q5T7B8 1368 aa24.95■■□□□ 1.59
TNFAIP2-206ENST00000560428 LTV1Q96GA3 475 aaPredicted RBP24.95■■□□□ 1.58
TNFAIP2-206ENST00000560428 R3HDM1Q15032 1099 aaKnown RBP24.94■■□□□ 1.58
TNFAIP2-206ENST00000560428 RRS1Q15050 365 aaKnown RBP24.94■■□□□ 1.58
TNFAIP2-206ENST00000560428 NHSQ6T4R5 1651 aa24.94■■□□□ 1.58
TNFAIP2-206ENST00000560428 SMG6Q86US8 1419 aaKnown RBP24.92■■□□□ 1.58
TNFAIP2-206ENST00000560428 RGPD2P0DJD1 1756 aa24.91■■□□□ 1.58
TNFAIP2-206ENST00000560428 NBPF14Q5TI25 921 aa24.91■■□□□ 1.58
TNFAIP2-206ENST00000560428 PTF1AQ7RTS3 328 aa24.91■■□□□ 1.58
TNFAIP2-206ENST00000560428 FLT4P35916 1363 aa24.91■■□□□ 1.58
TNFAIP2-206ENST00000560428 CGNL1Q0VF96 1302 aa24.9■■□□□ 1.58
TNFAIP2-206ENST00000560428 INSRP06213 1382 aa24.9■■□□□ 1.58
TNFAIP2-206ENST00000560428 ANKRD26Q9UPS8 1709 aa24.89■■□□□ 1.57
TNFAIP2-206ENST00000560428 POLR3GLQ9BT43 218 aa24.87■■□□□ 1.57
TNFAIP2-206ENST00000560428 KCNQ2O43526 872 aa24.84■■□□□ 1.57
TNFAIP2-206ENST00000560428 HSP90AB2PQ58FF8 381 aa24.84■■□□□ 1.57
TNFAIP2-206ENST00000560428 NBPF6Q5VWK0 638 aa24.84■■□□□ 1.57
TNFAIP2-206ENST00000560428 NBPF4Q96M43 638 aa24.84■■□□□ 1.57
TNFAIP2-206ENST00000560428 MEGF6O75095 1541 aa24.84■■□□□ 1.57
TNFAIP2-206ENST00000560428 SHANK3Q9BYB0 1731 aa24.83■■□□□ 1.57
TNFAIP2-206ENST00000560428 PROM2Q8N271 834 aa24.82■■□□□ 1.56
TNFAIP2-206ENST00000560428 ACSBG1Q96GR2 724 aa24.82■■□□□ 1.56
TNFAIP2-206ENST00000560428 BTAF1O14981 1849 aa24.82■■□□□ 1.56
TNFAIP2-206ENST00000560428 EMILIN1Q9Y6C2 1016 aa24.81■■□□□ 1.56
TNFAIP2-206ENST00000560428 MAP2P11137 1827 aaKnown RBP24.8■■□□□ 1.56
TNFAIP2-206ENST00000560428 TXNRD1Q16881 649 aa24.8■■□□□ 1.56
TNFAIP2-206ENST00000560428 ZCRB1Q8TBF4 217 aaKnown RBP24.8■■□□□ 1.56
TNFAIP2-206ENST00000560428 DDX54Q8TDD1 881 aaKnown RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 209.7 ms