RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 BRWD3Q6RI45 1802 aa24.61■■□□□ 1.53
SMAD3-210ENST00000559092 PDE3BQ13370 1112 aa24.61■■□□□ 1.53
SMAD3-210ENST00000559092 MON2Q7Z3U7 1717 aa24.61■■□□□ 1.53
SMAD3-210ENST00000559092 WDR17Q8IZU2 1322 aa24.61■■□□□ 1.53
SMAD3-210ENST00000559092 FAM196AQ6ZSG2 479 aa24.6■■□□□ 1.53
SMAD3-210ENST00000559092 TOM1L2Q6ZVM7 507 aa24.6■■□□□ 1.53
SMAD3-210ENST00000559092 ANKRD36BQ8N2N9 1353 aa24.59■■□□□ 1.53
SMAD3-210ENST00000559092 NFAT5O94916 1531 aa24.59■■□□□ 1.53
SMAD3-210ENST00000559092 FAM182BQ5T319 152 aa24.57■■□□□ 1.52
SMAD3-210ENST00000559092 BAG6P46379 1132 aa24.56■■□□□ 1.52
SMAD3-210ENST00000559092 DEFB132Q7Z7B7 95 aa24.56■■□□□ 1.52
SMAD3-210ENST00000559092 CDCA7Q9BWT1 371 aaPredicted RBP24.56■■□□□ 1.52
SMAD3-210ENST00000559092 CARD10Q9BWT7 1032 aa24.56■■□□□ 1.52
SMAD3-210ENST00000559092 C11orf95C9JLR9 678 aaPredicted RBP24.55■■□□□ 1.52
SMAD3-210ENST00000559092 ABCC6O95255 1503 aa24.55■■□□□ 1.52
SMAD3-210ENST00000559092 CSB-PGBD3P0DP91 1061 aa24.54■■□□□ 1.52
SMAD3-210ENST00000559092 COG3Q96JB2 828 aa24.54■■□□□ 1.52
SMAD3-210ENST00000559092 COL18A1P39060 1754 aa24.54■■□□□ 1.52
SMAD3-210ENST00000559092 OVOS2A0A0J9YW53 1432 aa24.53■■□□□ 1.52
SMAD3-210ENST00000559092 OVOS2Q6IE36 1432 aa24.53■■□□□ 1.52
SMAD3-210ENST00000559092 USP54Q70EL1 1684 aa24.52■■□□□ 1.52
SMAD3-210ENST00000559092 DDB1Q16531 1140 aa24.5■■□□□ 1.51
SMAD3-210ENST00000559092 EIF4G2P78344 907 aaKnown RBP eCLIP24.49■■□□□ 1.511e-12■■■■■ 28.7
SMAD3-210ENST00000559092 CCDC7Q96M83 1385 aa24.49■■□□□ 1.51
SMAD3-210ENST00000559092 FYB1O15117 783 aa24.48■■□□□ 1.51
SMAD3-210ENST00000559092 TRIM37O94972 964 aa24.48■■□□□ 1.51
SMAD3-210ENST00000559092 ERBB3P21860 1342 aa24.48■■□□□ 1.51
SMAD3-210ENST00000559092 IP6K1Q92551 441 aa24.48■■□□□ 1.51
SMAD3-210ENST00000559092 DISP2A7MBM2 1401 aa24.47■■□□□ 1.51
SMAD3-210ENST00000559092 ANKRD24Q8TF21 1146 aa24.45■■□□□ 1.5
SMAD3-210ENST00000559092 EN1Q05925 392 aaPredicted RBP24.44■■□□□ 1.5
SMAD3-210ENST00000559092 NLRP2Q9NX02 1062 aa24.44■■□□□ 1.5
SMAD3-210ENST00000559092 EXOC5O00471 708 aa24.43■■□□□ 1.5
SMAD3-210ENST00000559092 CARD14Q9BXL6 1004 aa24.43■■□□□ 1.5
SMAD3-210ENST00000559092 APBA3O96018 575 aa24.42■■□□□ 1.5
SMAD3-210ENST00000559092 HSPA5P11021 654 aaKnown RBP24.42■■□□□ 1.5
SMAD3-210ENST00000559092 GGNBP2Q9H3C7 697 aa24.42■■□□□ 1.5
SMAD3-210ENST00000559092 PARP4Q9UKK3 1724 aaKnown RBP24.41■■□□□ 1.5
SMAD3-210ENST00000559092 SRCAPQ6ZRS2 3230 aa24.41■■□□□ 1.5
SMAD3-210ENST00000559092 MAP3K19Q56UN5 1328 aa24.41■■□□□ 1.5
SMAD3-210ENST00000559092 CAMKK2Q96RR4 588 aa24.41■■□□□ 1.5
SMAD3-210ENST00000559092 OVOS2A0A0G2JMS6 1433 aa24.41■■□□□ 1.5
SMAD3-210ENST00000559092 AMPHP49418 695 aa24.4■■□□□ 1.5
SMAD3-210ENST00000559092 PARD3Q8TEW0 1356 aa24.4■■□□□ 1.5
SMAD3-210ENST00000559092 MARCH10Q8NA82 808 aaPredicted RBP24.39■■□□□ 1.49
SMAD3-210ENST00000559092 RGPD1P0DJD0 1748 aa24.38■■□□□ 1.49
SMAD3-210ENST00000559092 BCL9O00512 1426 aa24.38■■□□□ 1.49
SMAD3-210ENST00000559092 HOXC9P31274 260 aa24.38■■□□□ 1.49
SMAD3-210ENST00000559092 IL2RBP14784 551 aa24.37■■□□□ 1.49
SMAD3-210ENST00000559092 FBLN1P23142 703 aa24.37■■□□□ 1.49
SMAD3-210ENST00000559092 EZH2Q15910 746 aaKnown RBP24.36■■□□□ 1.49
SMAD3-210ENST00000559092 RTL1A6NKG5 1358 aa24.35■■□□□ 1.49
SMAD3-210ENST00000559092 BCL11BQ9C0K0 894 aaPredicted RBP24.35■■□□□ 1.49
SMAD3-210ENST00000559092 NSD3Q9BZ95 1437 aa24.35■■□□□ 1.49
SMAD3-210ENST00000559092 LTV1Q96GA3 475 aaPredicted RBP24.34■■□□□ 1.49
SMAD3-210ENST00000559092 RGPD5Q99666 1765 aa24.34■■□□□ 1.49
SMAD3-210ENST00000559092 CGNL1Q0VF96 1302 aa24.34■■□□□ 1.49
SMAD3-210ENST00000559092 RRS1Q15050 365 aaKnown RBP24.33■■□□□ 1.49
SMAD3-210ENST00000559092 POLR3GLQ9BT43 218 aa24.33■■□□□ 1.49
SMAD3-210ENST00000559092 LRRC37A3O60309 1634 aa24.32■■□□□ 1.48
SMAD3-210ENST00000559092 KIF24Q5T7B8 1368 aa24.32■■□□□ 1.48
SMAD3-210ENST00000559092 LTN1O94822 1766 aa24.31■■□□□ 1.48
SMAD3-210ENST00000559092 PLSCR1O15162 318 aa24.31■■□□□ 1.48
SMAD3-210ENST00000559092 TNS2Q63HR2 1409 aa24.31■■□□□ 1.48
SMAD3-210ENST00000559092 TNS1Q9HBL0 1735 aaKnown RBP24.3■■□□□ 1.48
SMAD3-210ENST00000559092 PEAK1Q9H792 1746 aa24.29■■□□□ 1.48
SMAD3-210ENST00000559092 MYOM1P52179 1685 aa24.27■■□□□ 1.48
SMAD3-210ENST00000559092 INSRP06213 1382 aa24.27■■□□□ 1.48
SMAD3-210ENST00000559092 PANK3Q9H999 370 aa24.26■■□□□ 1.47
SMAD3-210ENST00000559092 FLT4P35916 1363 aa24.26■■□□□ 1.47
SMAD3-210ENST00000559092 HSP90AB2PQ58FF8 381 aa24.25■■□□□ 1.47
SMAD3-210ENST00000559092 NBPF14Q5TI25 921 aa24.25■■□□□ 1.47
SMAD3-210ENST00000559092 SMG6Q86US8 1419 aaKnown RBP24.25■■□□□ 1.47
SMAD3-210ENST00000559092 WNK3Q9BYP7 1800 aa24.24■■□□□ 1.47
SMAD3-210ENST00000559092 PSDA5PKW4 1024 aaPredicted RBP24.24■■□□□ 1.47
SMAD3-210ENST00000559092 R3HDM1Q15032 1099 aaKnown RBP24.23■■□□□ 1.47
SMAD3-210ENST00000559092 NBPF6Q5VWK0 638 aa24.23■■□□□ 1.47
SMAD3-210ENST00000559092 PTF1AQ7RTS3 328 aa24.23■■□□□ 1.47
SMAD3-210ENST00000559092 NBPF4Q96M43 638 aa24.23■■□□□ 1.47
SMAD3-210ENST00000559092 EMILIN1Q9Y6C2 1016 aa24.21■■□□□ 1.47
SMAD3-210ENST00000559092 FAM208AQ9UK61 1670 aaKnown RBP24.2■■□□□ 1.46
SMAD3-210ENST00000559092 WASHC2AQ641Q2 1341 aa24.19■■□□□ 1.46
SMAD3-210ENST00000559092 KCNQ2O43526 872 aa24.19■■□□□ 1.46
SMAD3-210ENST00000559092 ZCRB1Q8TBF4 217 aaKnown RBP24.19■■□□□ 1.46
SMAD3-210ENST00000559092 DDX54Q8TDD1 881 aaKnown RBP24.19■■□□□ 1.46
SMAD3-210ENST00000559092 RAPGEF4Q8WZA2 1011 aa24.18■■□□□ 1.46
SMAD3-210ENST00000559092 POLKQ9UBT6 870 aa24.18■■□□□ 1.46
SMAD3-210ENST00000559092 KIF20BQ96Q89 1820 aa24.18■■□□□ 1.46
SMAD3-210ENST00000559092 NSD2O96028 1365 aa24.17■■□□□ 1.46
SMAD3-210ENST00000559092 PPM1GO15355 546 aaPredicted RBP24.17■■□□□ 1.46
SMAD3-210ENST00000559092 PROM2Q8N271 834 aa24.16■■□□□ 1.46
SMAD3-210ENST00000559092 ACSBG1Q96GR2 724 aa24.16■■□□□ 1.46
SMAD3-210ENST00000559092 KNSTRNQ9Y448 316 aa24.15■■□□□ 1.46
SMAD3-210ENST00000559092 KIF7Q2M1P5 1343 aa24.14■■□□□ 1.46
SMAD3-210ENST00000559092 TATP17735 454 aaPredicted RBP24.14■■□□□ 1.45
SMAD3-210ENST00000559092 USHBP1Q8N6Y0 703 aa24.14■■□□□ 1.45
SMAD3-210ENST00000559092 TXNRD1Q16881 649 aa24.13■■□□□ 1.45
SMAD3-210ENST00000559092 SBF2Q86WG5 1849 aa24.12■■□□□ 1.45
SMAD3-210ENST00000559092 MEGF6O75095 1541 aa24.12■■□□□ 1.45
SMAD3-210ENST00000559092 RREB1Q92766 1687 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms