RNA–Protein interactions for RNA: ENST00000558545.1

COPS2-204, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 2

Gene COPS2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-204ENST00000558545 CCDC116Q8IYX3 515 aa10.78□□□□□ -0.68
COPS2-204ENST00000558545 KCTD15Q96SI1 283 aaPredicted RBP10.78□□□□□ -0.68
COPS2-204ENST00000558545 NDUFB9Q9Y6M9 179 aa10.78□□□□□ -0.68
COPS2-204ENST00000558545 ZBBXA8MT70 800 aa10.77□□□□□ -0.69
COPS2-204ENST00000558545 ZIC2O95409 532 aaPredicted RBP10.77□□□□□ -0.69
COPS2-204ENST00000558545 ITPKCQ96DU7 683 aa10.77□□□□□ -0.69
COPS2-204ENST00000558545 EMILIN1Q9Y6C2 1016 aa10.77□□□□□ -0.69
COPS2-204ENST00000558545 NBPF20Q3BBV1 942 aa10.76□□□□□ -0.69
COPS2-204ENST00000558545 BMP1P13497 986 aa10.75□□□□□ -0.69
COPS2-204ENST00000558545 ZFAND3Q9H8U3 227 aa10.75□□□□□ -0.69
COPS2-204ENST00000558545 FBXO45P0C2W1 286 aa10.74□□□□□ -0.69
COPS2-204ENST00000558545 DHX9Q08211 1270 aaKnown RBP10.74□□□□□ -0.69
COPS2-204ENST00000558545 MRPL14Q6P1L8 145 aaKnown RBP10.74□□□□□ -0.69
COPS2-204ENST00000558545 ESPNB1AK53 854 aa10.73□□□□□ -0.69
COPS2-204ENST00000558545 SNRPBP14678 240 aaKnown RBP10.73□□□□□ -0.69
COPS2-204ENST00000558545 INTS6LQ5JSJ4 861 aaKnown RBP10.73□□□□□ -0.69
COPS2-204ENST00000558545 PPP1R26Q5T8A7 1209 aaPredicted RBP10.73□□□□□ -0.69
COPS2-204ENST00000558545 DZIP3Q86Y13 1208 aaKnown RBP10.73□□□□□ -0.69
COPS2-204ENST00000558545 ZNF775Q96BV0 537 aaPredicted RBP10.73□□□□□ -0.69
COPS2-204ENST00000558545 NR1H3Q13133 447 aa10.72□□□□□ -0.69
COPS2-204ENST00000558545 MEIOBQ8N635 442 aa10.72□□□□□ -0.69
COPS2-204ENST00000558545 PGPEP1Q9NXJ5 209 aa10.72□□□□□ -0.69
COPS2-204ENST00000558545 MCCD1P59942 119 aaPredicted RBP10.71□□□□□ -0.69
COPS2-204ENST00000558545 SCARF1Q14162 830 aa10.71□□□□□ -0.69
COPS2-204ENST00000558545 SEPT12Q8IYM1 358 aa10.7□□□□□ -0.7
COPS2-204ENST00000558545 ZNF592Q92610 1267 aa10.7□□□□□ -0.7
COPS2-204ENST00000558545 ZFP42Q96MM3 310 aa10.7□□□□□ -0.7
COPS2-204ENST00000558545 Q6ZVU0 165 aa10.69□□□□□ -0.7
COPS2-204ENST00000558545 PRM3Q9NNZ6 103 aa10.69□□□□□ -0.7
COPS2-204ENST00000558545 ZNF330Q9Y3S2 320 aaPredicted RBP10.68□□□□□ -0.7
COPS2-204ENST00000558545 MCM6Q14566 821 aa10.67□□□□□ -0.7
COPS2-204ENST00000558545 CCDC125Q86Z20 511 aa10.67□□□□□ -0.7
COPS2-204ENST00000558545 LINC00528Q8N1L1 170 aa10.67□□□□□ -0.7
COPS2-204ENST00000558545 PURBQ96QR8 312 aaKnown RBP10.67□□□□□ -0.7
COPS2-204ENST00000558545 TBC1D2BQ9UPU7 963 aa10.67□□□□□ -0.7
COPS2-204ENST00000558545 TSEN34Q9BSV6 310 aaKnown RBP10.66□□□□□ -0.7
COPS2-204ENST00000558545 PCDHB9Q9Y5E1 797 aa10.66□□□□□ -0.7
COPS2-204ENST00000558545 UPP2O95045 317 aa10.65□□□□□ -0.7
COPS2-204ENST00000558545 ERVH48-1M5A8F1 160 aa10.64□□□□□ -0.71
COPS2-204ENST00000558545 TMEM132AQ24JP5 1023 aa10.64□□□□□ -0.71
COPS2-204ENST00000558545 TRIM52Q96A61 297 aa10.64□□□□□ -0.71
COPS2-204ENST00000558545 CBLBQ13191 982 aa10.62□□□□□ -0.71
COPS2-204ENST00000558545 IRF5Q13568 498 aa10.62□□□□□ -0.71
COPS2-204ENST00000558545 ZNF784Q8NCA9 323 aaPredicted RBP10.62□□□□□ -0.71
COPS2-204ENST00000558545 LILRA1O75019 489 aa10.61□□□□□ -0.71
COPS2-204ENST00000558545 GIGYF1O75420 1035 aaPredicted RBP10.61□□□□□ -0.71
COPS2-204ENST00000558545 BMP2P12643 396 aa10.61□□□□□ -0.71
COPS2-204ENST00000558545 LCE2AQ5TA79 106 aaPredicted RBP10.61□□□□□ -0.71
COPS2-204ENST00000558545 RNF20Q5VTR2 975 aa10.61□□□□□ -0.71
COPS2-204ENST00000558545 TMPRSS4Q9NRS4 437 aa10.61□□□□□ -0.71
COPS2-204ENST00000558545 C6orf118Q5T5N4 469 aa10.6□□□□□ -0.71
COPS2-204ENST00000558545 TREML4Q6UXN2 200 aa10.6□□□□□ -0.71
COPS2-204ENST00000558545 SOS2Q07890 1332 aaPredicted RBP10.59□□□□□ -0.71
COPS2-204ENST00000558545 SPINT1O43278 529 aa10.59□□□□□ -0.71
COPS2-204ENST00000558545 RAB15P59190 212 aa10.59□□□□□ -0.71
COPS2-204ENST00000558545 NPAS3Q8IXF0 933 aa10.59□□□□□ -0.71
COPS2-204ENST00000558545 GDPD2Q9HCC8 539 aa10.59□□□□□ -0.71
COPS2-204ENST00000558545 NFX1Q12986 1120 aaKnown RBP10.58□□□□□ -0.72
COPS2-204ENST00000558545 TERTO14746 1132 aaKnown RBP10.57□□□□□ -0.72
COPS2-204ENST00000558545 ADH1AP07327 375 aa10.57□□□□□ -0.72
COPS2-204ENST00000558545 ADD1P35611 737 aaKnown RBP10.56□□□□□ -0.72
COPS2-204ENST00000558545 EIF4G2P78344 907 aaKnown RBP eCLIP10.56□□□□□ -0.72
COPS2-204ENST00000558545 FLIIQ13045 1269 aa10.56□□□□□ -0.72
COPS2-204ENST00000558545 WASHC4Q2M389 1173 aa10.56□□□□□ -0.72
COPS2-204ENST00000558545 NXF1Q9UBU9 619 aaKnown RBP10.56□□□□□ -0.72
COPS2-204ENST00000558545 WFS1O76024 890 aa10.55□□□□□ -0.72
COPS2-204ENST00000558545 ERVK-9P63128 1117 aa10.55□□□□□ -0.72
COPS2-204ENST00000558545 CEP126Q9P2H0 1117 aa10.55□□□□□ -0.72
COPS2-204ENST00000558545 COG6Q9Y2V7 657 aa10.55□□□□□ -0.72
COPS2-204ENST00000558545 MAN1A2O60476 641 aa10.54□□□□□ -0.72
COPS2-204ENST00000558545 ABL2P42684 1182 aa10.54□□□□□ -0.72
COPS2-204ENST00000558545 KDF1Q8NAX2 398 aaPredicted RBP10.54□□□□□ -0.72
COPS2-204ENST00000558545 AGBL1Q96MI9 1066 aa10.54□□□□□ -0.72
COPS2-204ENST00000558545 TTLL8A6PVC2 850 aa10.53□□□□□ -0.72
COPS2-204ENST00000558545 CYLDQ9NQC7 956 aa10.53□□□□□ -0.72
COPS2-204ENST00000558545 DNMT3LQ9UJW3 386 aa10.53□□□□□ -0.72
COPS2-204ENST00000558545 SOBPA7XYQ1 873 aa10.52□□□□□ -0.73
COPS2-204ENST00000558545 VAC14Q08AM6 782 aa10.52□□□□□ -0.73
COPS2-204ENST00000558545 CC2D2BQ6DHV5 1058 aa10.52□□□□□ -0.73
COPS2-204ENST00000558545 PTGIRP43119 386 aa10.51□□□□□ -0.73
COPS2-204ENST00000558545 RELBQ01201 579 aa10.51□□□□□ -0.73
COPS2-204ENST00000558545 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.51□□□□□ -0.732e-6■■■■□ 24.6
COPS2-204ENST00000558545 SOX11P35716 441 aa10.5□□□□□ -0.73
COPS2-204ENST00000558545 PHTF2Q8N3S3 785 aa10.5□□□□□ -0.73
COPS2-204ENST00000558545 SLC16A10Q8TF71 515 aa10.5□□□□□ -0.73
COPS2-204ENST00000558545 PCDHB11Q9Y5F2 797 aa10.5□□□□□ -0.73
COPS2-204ENST00000558545 H3BM21 787 aa10.49□□□□□ -0.73
COPS2-204ENST00000558545 INSM2Q96T92 566 aaPredicted RBP10.49□□□□□ -0.73
COPS2-204ENST00000558545 ATP5J2-PTCD1G3V325 749 aa10.48□□□□□ -0.73
COPS2-204ENST00000558545 CTSOP43234 321 aaPredicted RBP10.48□□□□□ -0.73
COPS2-204ENST00000558545 LCE2CQ5TA81 110 aa10.48□□□□□ -0.73
COPS2-204ENST00000558545 CCDC85AQ96PX6 553 aaPredicted RBP10.48□□□□□ -0.73
COPS2-204ENST00000558545 ZNF395Q9H8N7 513 aaPredicted RBP10.48□□□□□ -0.73
COPS2-204ENST00000558545 CHIC2Q9UKJ5 165 aa10.48□□□□□ -0.73
COPS2-204ENST00000558545 TRAK2O60296 914 aa10.47□□□□□ -0.73
COPS2-204ENST00000558545 SCTRP47872 440 aa10.47□□□□□ -0.73
COPS2-204ENST00000558545 POM121Q96HA1 1249 aa10.47□□□□□ -0.73
COPS2-204ENST00000558545 WIPF1O43516 503 aa10.46□□□□□ -0.73
COPS2-204ENST00000558545 CYP2U1Q7Z449 544 aa10.46□□□□□ -0.73
COPS2-204ENST00000558545 RNF217Q8TC41 542 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms