RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 C6orf229H3BNL8 230 aa10.11□□□□□ -0.79
ZEB1-211ENST00000558440 TBC1D2Q9BYX2 928 aa10.11□□□□□ -0.79
ZEB1-211ENST00000558440 EFCAB5A4FU69 1503 aa10.11□□□□□ -0.79
ZEB1-211ENST00000558440 ZMYM4Q5VZL5 1548 aa10.11□□□□□ -0.79
ZEB1-211ENST00000558440 ZFYVE16Q7Z3T8 1539 aa10.11□□□□□ -0.79
ZEB1-211ENST00000558440 SIGLEC1Q9BZZ2 1709 aa10.1□□□□□ -0.79
ZEB1-211ENST00000558440 TTC37Q6PGP7 1564 aa10.1□□□□□ -0.79
ZEB1-211ENST00000558440 FHOD3Q2V2M9 1422 aa10.1□□□□□ -0.79
ZEB1-211ENST00000558440 DGAT1O75907 488 aa10.1□□□□□ -0.79
ZEB1-211ENST00000558440 RANGAP1P46060 587 aaPredicted RBP10.1□□□□□ -0.79
ZEB1-211ENST00000558440 FOXC1Q12948 553 aa10.1□□□□□ -0.79
ZEB1-211ENST00000558440 DIXDC1Q155Q3 683 aa10.1□□□□□ -0.79
ZEB1-211ENST00000558440 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.1□□□□□ -0.79
ZEB1-211ENST00000558440 GJA5P36382 358 aa10.09□□□□□ -0.79
ZEB1-211ENST00000558440 HSPA2P54652 639 aa10.09□□□□□ -0.79
ZEB1-211ENST00000558440 MYT1Q01538 1121 aa10.09□□□□□ -0.79
ZEB1-211ENST00000558440 TRIM32Q13049 653 aa10.09□□□□□ -0.79
ZEB1-211ENST00000558440 CCDC24Q8N4L8 307 aa10.08□□□□□ -0.8
ZEB1-211ENST00000558440 PREX1Q8TCU6 1659 aa10.08□□□□□ -0.8
ZEB1-211ENST00000558440 HECW1Q76N89 1606 aa10.07□□□□□ -0.8
ZEB1-211ENST00000558440 MYO5CQ9NQX4 1742 aa10.07□□□□□ -0.8
ZEB1-211ENST00000558440 MAGI2Q86UL8 1455 aa10.07□□□□□ -0.8
ZEB1-211ENST00000558440 FAM187AA6NFU0 413 aa10.07□□□□□ -0.8
ZEB1-211ENST00000558440 RSBN1LQ6PCB5 846 aaPredicted RBP10.07□□□□□ -0.8
ZEB1-211ENST00000558440 SETD1BQ9UPS6 1966 aaKnown RBP10.06□□□□□ -0.8
ZEB1-211ENST00000558440 MTMR2Q13614 643 aa10.06□□□□□ -0.8
ZEB1-211ENST00000558440 NUDT12Q9BQG2 462 aa10.06□□□□□ -0.8
ZEB1-211ENST00000558440 YEATS2Q9ULM3 1422 aa10.06□□□□□ -0.8
ZEB1-211ENST00000558440 SPDYE5A6NIY4 337 aa10.05□□□□□ -0.8
ZEB1-211ENST00000558440 SPTLC1O15269 473 aa10.05□□□□□ -0.8
ZEB1-211ENST00000558440 MLECQ14165 292 aa10.05□□□□□ -0.8
ZEB1-211ENST00000558440 TOR4AQ9NXH8 423 aa10.05□□□□□ -0.8
ZEB1-211ENST00000558440 EEA1Q15075 1411 aa10.05□□□□□ -0.8
ZEB1-211ENST00000558440 POTECB2RU33 542 aa10.04□□□□□ -0.8
ZEB1-211ENST00000558440 WNT7AO00755 349 aa10.04□□□□□ -0.8
ZEB1-211ENST00000558440 PRR7Q8TB68 274 aa10.04□□□□□ -0.8
ZEB1-211ENST00000558440 CDK13Q14004 1512 aaKnown RBP10.03□□□□□ -0.8
ZEB1-211ENST00000558440 CYP4X1Q8N118 509 aa10.03□□□□□ -0.8
ZEB1-211ENST00000558440 SCAPERQ9BY12 1400 aa10.03□□□□□ -0.8
ZEB1-211ENST00000558440 CCNYL3P0C7X3 344 aa10.02□□□□□ -0.81
ZEB1-211ENST00000558440 PTPRNQ16849 979 aa10.02□□□□□ -0.81
ZEB1-211ENST00000558440 DESI1Q6ICB0 168 aa10.02□□□□□ -0.81
ZEB1-211ENST00000558440 PCDHB15Q9Y5E8 787 aa10.02□□□□□ -0.81
ZEB1-211ENST00000558440 ATP10AO60312 1499 aa10.02□□□□□ -0.81
ZEB1-211ENST00000558440 ARHGEF12Q9NZN5 1544 aa10.02□□□□□ -0.81
ZEB1-211ENST00000558440 STRCQ7RTU9 1775 aa10.01□□□□□ -0.81
ZEB1-211ENST00000558440 PLCH2O75038 1416 aa10.01□□□□□ -0.81
ZEB1-211ENST00000558440 C9orf84Q5VXU9 1444 aa10.01□□□□□ -0.81
ZEB1-211ENST00000558440 RIC3Q7Z5B4 369 aa10.01□□□□□ -0.81
ZEB1-211ENST00000558440 WNT7BP56706 349 aa10□□□□□ -0.81
ZEB1-211ENST00000558440 SKOR1P84550 965 aa10□□□□□ -0.81
ZEB1-211ENST00000558440 MYSM1Q5VVJ2 828 aa10□□□□□ -0.81
ZEB1-211ENST00000558440 PTCRAQ6ISU1 281 aaPredicted RBP10□□□□□ -0.81
ZEB1-211ENST00000558440 HRCP23327 699 aa9.99□□□□□ -0.81
ZEB1-211ENST00000558440 PRPF38BQ5VTL8 546 aaKnown RBP9.99□□□□□ -0.81
ZEB1-211ENST00000558440 MRGPRX2Q96LB1 330 aa9.99□□□□□ -0.81
ZEB1-211ENST00000558440 ZBTB3Q9H5J0 574 aa9.99□□□□□ -0.81
ZEB1-211ENST00000558440 KIF14Q15058 1648 aa9.99□□□□□ -0.81
ZEB1-211ENST00000558440 EFCAB2Q5VUJ9 269 aa9.98□□□□□ -0.81
ZEB1-211ENST00000558440 SNIP1Q8TAD8 396 aaKnown RBP9.98□□□□□ -0.81
ZEB1-211ENST00000558440 EVA1BQ9NVM1 165 aa9.98□□□□□ -0.81
ZEB1-211ENST00000558440 ATP1B4Q9UN42 357 aaPredicted RBP9.98□□□□□ -0.81
ZEB1-211ENST00000558440 ZNF518AQ6AHZ1 1483 aa9.98□□□□□ -0.81
ZEB1-211ENST00000558440 ARHGAP5Q13017 1502 aa9.97□□□□□ -0.81
ZEB1-211ENST00000558440 C3P01024 1663 aa9.97□□□□□ -0.81
ZEB1-211ENST00000558440 TTC24A2A3L6 582 aaPredicted RBP9.97□□□□□ -0.81
ZEB1-211ENST00000558440 CFAP99D6REC4 459 aa9.97□□□□□ -0.81
ZEB1-211ENST00000558440 AVPP01185 164 aa9.97□□□□□ -0.81
ZEB1-211ENST00000558440 TUSC1Q2TAM9 212 aa9.97□□□□□ -0.81
ZEB1-211ENST00000558440 RC3H1Q5TC82 1133 aaKnown RBP9.97□□□□□ -0.81
ZEB1-211ENST00000558440 LIMD1Q9UGP4 676 aa9.97□□□□□ -0.81
ZEB1-211ENST00000558440 CDK11AQ9UQ88 783 aaPredicted RBP9.97□□□□□ -0.81
ZEB1-211ENST00000558440 FMN1Q68DA7 1419 aa9.97□□□□□ -0.81
ZEB1-211ENST00000558440 UHRF1BP1Q6BDS2 1440 aa9.97□□□□□ -0.81
ZEB1-211ENST00000558440 KDM5CP41229 1560 aa9.97□□□□□ -0.81
ZEB1-211ENST00000558440 CDC42BPBQ9Y5S2 1711 aa9.96□□□□□ -0.81
ZEB1-211ENST00000558440 CEBPAP49715 358 aaPredicted RBP9.96□□□□□ -0.82
ZEB1-211ENST00000558440 TREML4Q6UXN2 200 aa9.96□□□□□ -0.82
ZEB1-211ENST00000558440 CABLES1Q8TDN4 633 aa9.96□□□□□ -0.82
ZEB1-211ENST00000558440 AAASQ9NRG9 546 aa9.96□□□□□ -0.82
ZEB1-211ENST00000558440 DISP3Q9P2K9 1392 aa9.96□□□□□ -0.82
ZEB1-211ENST00000558440 LRRIQ1Q96JM4 1722 aa9.96□□□□□ -0.82
ZEB1-211ENST00000558440 KCNH2Q12809 1159 aa9.95□□□□□ -0.82
ZEB1-211ENST00000558440 CSPP1Q1MSJ5 1256 aa9.95□□□□□ -0.82
ZEB1-211ENST00000558440 LYPD8Q6UX82 237 aa9.95□□□□□ -0.82
ZEB1-211ENST00000558440 CRIPAKQ8N1N5 446 aa9.95□□□□□ -0.82
ZEB1-211ENST00000558440 UNC93B1Q9H1C4 597 aa9.95□□□□□ -0.82
ZEB1-211ENST00000558440 DIP2CQ9Y2E4 1556 aa9.95□□□□□ -0.82
ZEB1-211ENST00000558440 ABCA6Q8N139 1617 aa9.94□□□□□ -0.82
ZEB1-211ENST00000558440 REREQ9P2R6 1566 aa9.94□□□□□ -0.82
ZEB1-211ENST00000558440 CLIP1P30622 1438 aa9.94□□□□□ -0.82
ZEB1-211ENST00000558440 ST8SIA5O15466 376 aa9.94□□□□□ -0.82
ZEB1-211ENST00000558440 SMPD1P17405 629 aa9.94□□□□□ -0.82
ZEB1-211ENST00000558440 ITSN2Q9NZM3 1697 aa9.93□□□□□ -0.82
ZEB1-211ENST00000558440 SPATA31D1Q6ZQQ2 1576 aa9.93□□□□□ -0.82
ZEB1-211ENST00000558440 QPCTQ16769 361 aa9.93□□□□□ -0.82
ZEB1-211ENST00000558440 RSPH6AQ9H0K4 717 aa9.93□□□□□ -0.82
ZEB1-211ENST00000558440 ESF1Q9H501 851 aaKnown RBP9.93□□□□□ -0.82
ZEB1-211ENST00000558440 PREX2Q70Z35 1606 aa9.93□□□□□ -0.82
ZEB1-211ENST00000558440 TROQ12816 1431 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms