RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 SPATA31A1Q5TZJ5 1347 aa12.37□□□□□ -0.43
SNRPA1-206ENST00000558059 SLC24A1O60721 1099 aa12.37□□□□□ -0.43
SNRPA1-206ENST00000558059 KRT27Q7Z3Y8 459 aa12.37□□□□□ -0.43
SNRPA1-206ENST00000558059 SP7Q8TDD2 431 aaPredicted RBP12.37□□□□□ -0.43
SNRPA1-206ENST00000558059 USP47Q96K76 1375 aa12.37□□□□□ -0.43
SNRPA1-206ENST00000558059 COL18A1P39060 1754 aa12.37□□□□□ -0.43
SNRPA1-206ENST00000558059 EVA1CP58658 441 aa12.36□□□□□ -0.43
SNRPA1-206ENST00000558059 LARP1Q6PKG0 1096 aaKnown RBP12.36□□□□□ -0.43
SNRPA1-206ENST00000558059 ZRANB1Q9UGI0 708 aa12.36□□□□□ -0.43
SNRPA1-206ENST00000558059 THSD7AQ9UPZ6 1657 aa12.35□□□□□ -0.43
SNRPA1-206ENST00000558059 AATKQ6ZMQ8 1374 aa12.35□□□□□ -0.43
SNRPA1-206ENST00000558059 HDGFL2Q7Z4V5 671 aaPredicted RBP12.35□□□□□ -0.43
SNRPA1-206ENST00000558059 ARHGEF25Q86VW2 580 aa12.35□□□□□ -0.43
SNRPA1-206ENST00000558059 CCDC125Q86Z20 511 aa12.35□□□□□ -0.43
SNRPA1-206ENST00000558059 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.35□□□□□ -0.43
SNRPA1-206ENST00000558059 CCER1Q8TC90 406 aaPredicted RBP12.35□□□□□ -0.43
SNRPA1-206ENST00000558059 A0A1W2PP64 1363 aa12.34□□□□□ -0.43
SNRPA1-206ENST00000558059 USP31Q70CQ4 1352 aa12.34□□□□□ -0.43
SNRPA1-206ENST00000558059 RGPD5Q99666 1765 aa12.34□□□□□ -0.43
SNRPA1-206ENST00000558059 A0A0G2JS52 829 aa12.34□□□□□ -0.43
SNRPA1-206ENST00000558059 MYT1Q01538 1121 aa12.34□□□□□ -0.43
SNRPA1-206ENST00000558059 NME9Q86XW9 330 aa12.34□□□□□ -0.43
SNRPA1-206ENST00000558059 PIP4P2Q8N4L2 257 aa12.34□□□□□ -0.43
SNRPA1-206ENST00000558059 KCNH5Q8NCM2 988 aa12.34□□□□□ -0.43
SNRPA1-206ENST00000558059 TERF2IPQ9NYB0 399 aa12.34□□□□□ -0.43
SNRPA1-206ENST00000558059 COL5A2P05997 1499 aaPredicted RBP12.34□□□□□ -0.43
SNRPA1-206ENST00000558059 NFAT5O94916 1531 aa12.33□□□□□ -0.44
SNRPA1-206ENST00000558059 USP54Q70EL1 1684 aa12.33□□□□□ -0.44
SNRPA1-206ENST00000558059 ZBTB7CA1YPR0 619 aa12.33□□□□□ -0.44
SNRPA1-206ENST00000558059 TMF1P82094 1093 aa12.33□□□□□ -0.44
SNRPA1-206ENST00000558059 BARGINQ6ZT62 677 aa12.33□□□□□ -0.44
SNRPA1-206ENST00000558059 USP35Q9P2H5 1018 aa12.33□□□□□ -0.44
SNRPA1-206ENST00000558059 AXIN2Q9Y2T1 843 aa12.33□□□□□ -0.44
SNRPA1-206ENST00000558059 EDC4Q6P2E9 1401 aaKnown RBP12.33□□□□□ -0.44
SNRPA1-206ENST00000558059 NINLQ9Y2I6 1382 aa12.32□□□□□ -0.44
SNRPA1-206ENST00000558059 BLMP54132 1417 aaPredicted RBP12.32□□□□□ -0.44
SNRPA1-206ENST00000558059 ZBTB22O15209 634 aa12.32□□□□□ -0.44
SNRPA1-206ENST00000558059 SOX12O15370 315 aa12.32□□□□□ -0.44
SNRPA1-206ENST00000558059 TCP11L2Q8N4U5 519 aa12.32□□□□□ -0.44
SNRPA1-206ENST00000558059 FAM182BQ5T319 152 aa12.31□□□□□ -0.44
SNRPA1-206ENST00000558059 THRAP3Q9Y2W1 955 aaKnown RBP12.3□□□□□ -0.44
SNRPA1-206ENST00000558059 CRB1P82279 1406 aa12.29□□□□□ -0.44
SNRPA1-206ENST00000558059 PITPNM1O00562 1244 aa12.29□□□□□ -0.44
SNRPA1-206ENST00000558059 ANKRD36BQ8N2N9 1353 aa12.29□□□□□ -0.44
SNRPA1-206ENST00000558059 OVOS2A0A0J9YW53 1432 aa12.28□□□□□ -0.44
SNRPA1-206ENST00000558059 OVOS2Q6IE36 1432 aa12.28□□□□□ -0.44
SNRPA1-206ENST00000558059 LTN1O94822 1766 aa12.28□□□□□ -0.44
SNRPA1-206ENST00000558059 CDCA8Q53HL2 280 aa12.28□□□□□ -0.44
SNRPA1-206ENST00000558059 DEFB132Q7Z7B7 95 aa12.28□□□□□ -0.44
SNRPA1-206ENST00000558059 WDR17Q8IZU2 1322 aa12.28□□□□□ -0.44
SNRPA1-206ENST00000558059 TOM1L2Q6ZVM7 507 aa12.27□□□□□ -0.45
SNRPA1-206ENST00000558059 PARP4Q9UKK3 1724 aaKnown RBP12.27□□□□□ -0.45
SNRPA1-206ENST00000558059 ABCC6O95255 1503 aa12.27□□□□□ -0.45
SNRPA1-206ENST00000558059 PDE3BQ13370 1112 aa12.26□□□□□ -0.45
SNRPA1-206ENST00000558059 SF3B2Q13435 895 aaKnown RBP12.26□□□□□ -0.45
SNRPA1-206ENST00000558059 SRCAPQ6ZRS2 3230 aa12.25□□□□□ -0.45
SNRPA1-206ENST00000558059 FAM196AQ6ZSG2 479 aa12.25□□□□□ -0.45
SNRPA1-206ENST00000558059 CARD10Q9BWT7 1032 aa12.25□□□□□ -0.45
SNRPA1-206ENST00000558059 MYOM1P52179 1685 aa12.25□□□□□ -0.45
SNRPA1-206ENST00000558059 RGPD1P0DJD0 1748 aa12.25□□□□□ -0.45
SNRPA1-206ENST00000558059 FYB1O15117 783 aa12.24□□□□□ -0.45
SNRPA1-206ENST00000558059 CSB-PGBD3P0DP91 1061 aa12.24□□□□□ -0.45
SNRPA1-206ENST00000558059 HSPA5P11021 654 aaKnown RBP12.24□□□□□ -0.45
SNRPA1-206ENST00000558059 FBLN1P23142 703 aa12.24□□□□□ -0.45
SNRPA1-206ENST00000558059 FXR2P51116 673 aaKnown RBP eCLIP12.24□□□□□ -0.45
SNRPA1-206ENST00000558059 COG3Q96JB2 828 aa12.24□□□□□ -0.45
SNRPA1-206ENST00000558059 WNK3Q9BYP7 1800 aa12.24□□□□□ -0.45
SNRPA1-206ENST00000558059 TNS1Q9HBL0 1735 aaKnown RBP12.23□□□□□ -0.45
SNRPA1-206ENST00000558059 ERBB3P21860 1342 aa12.23□□□□□ -0.45
SNRPA1-206ENST00000558059 TRIM37O94972 964 aa12.23□□□□□ -0.45
SNRPA1-206ENST00000558059 EIF4G2P78344 907 aaKnown RBP eCLIP12.23□□□□□ -0.45
SNRPA1-206ENST00000558059 CARD14Q9BXL6 1004 aa12.23□□□□□ -0.45
SNRPA1-206ENST00000558059 DISP2A7MBM2 1401 aa12.22□□□□□ -0.45
SNRPA1-206ENST00000558059 BAG6P46379 1132 aa12.22□□□□□ -0.45
SNRPA1-206ENST00000558059 IP6K1Q92551 441 aa12.22□□□□□ -0.45
SNRPA1-206ENST00000558059 CDCA7Q9BWT1 371 aaPredicted RBP12.22□□□□□ -0.45
SNRPA1-206ENST00000558059 GGNBP2Q9H3C7 697 aa12.22□□□□□ -0.45
SNRPA1-206ENST00000558059 LRRC37A3O60309 1634 aa12.22□□□□□ -0.45
SNRPA1-206ENST00000558059 CCDC7Q96M83 1385 aa12.21□□□□□ -0.45
SNRPA1-206ENST00000558059 SBF2Q86WG5 1849 aa12.21□□□□□ -0.45
SNRPA1-206ENST00000558059 PEAK1Q9H792 1746 aa12.21□□□□□ -0.45
SNRPA1-206ENST00000558059 EN1Q05925 392 aaPredicted RBP12.21□□□□□ -0.45
SNRPA1-206ENST00000558059 DDB1Q16531 1140 aa12.21□□□□□ -0.45
SNRPA1-206ENST00000558059 ANKRD24Q8TF21 1146 aa12.21□□□□□ -0.45
SNRPA1-206ENST00000558059 KIF20BQ96Q89 1820 aa12.21□□□□□ -0.46
SNRPA1-206ENST00000558059 MAP3K19Q56UN5 1328 aa12.2□□□□□ -0.46
SNRPA1-206ENST00000558059 NLRP2Q9NX02 1062 aa12.2□□□□□ -0.46
SNRPA1-206ENST00000558059 KAT6BQ8WYB5 2073 aa12.19□□□□□ -0.46
SNRPA1-206ENST00000558059 ATXN8OSP0DMR3 200 aa12.19□□□□□ -0.46
SNRPA1-206ENST00000558059 HOXC9P31274 260 aa12.19□□□□□ -0.46
SNRPA1-206ENST00000558059 MARCH10Q8NA82 808 aaPredicted RBP12.19□□□□□ -0.46
SNRPA1-206ENST00000558059 CAMKK2Q96RR4 588 aa12.19□□□□□ -0.46
SNRPA1-206ENST00000558059 NSD3Q9BZ95 1437 aa12.19□□□□□ -0.46
SNRPA1-206ENST00000558059 C11orf95C9JLR9 678 aaPredicted RBP12.18□□□□□ -0.46
SNRPA1-206ENST00000558059 APBA3O96018 575 aa12.18□□□□□ -0.46
SNRPA1-206ENST00000558059 AMPHP49418 695 aa12.18□□□□□ -0.46
SNRPA1-206ENST00000558059 RRS1Q15050 365 aaKnown RBP12.18□□□□□ -0.46
SNRPA1-206ENST00000558059 EZH2Q15910 746 aaKnown RBP12.18□□□□□ -0.46
SNRPA1-206ENST00000558059 POLR3GLQ9BT43 218 aa12.18□□□□□ -0.46
SNRPA1-206ENST00000558059 OVOS2A0A0G2JMS6 1433 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms