RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 NEUROD1Q13562 356 aa16.07■□□□□ 0.16
HNRNPC-231ENST00000557336 TCP11L2Q8N4U5 519 aa16.07■□□□□ 0.16
HNRNPC-231ENST00000557336 SLIT3O75094 1523 aa16.07■□□□□ 0.16
HNRNPC-231ENST00000557336 AATKQ6ZMQ8 1374 aa16.06■□□□□ 0.16
HNRNPC-231ENST00000557336 EVC2Q86UK5 1308 aa16.06■□□□□ 0.16
HNRNPC-231ENST00000557336 AXIN2Q9Y2T1 843 aa16.06■□□□□ 0.16
HNRNPC-231ENST00000557336 LRP5O75197 1615 aa16.05■□□□□ 0.16
HNRNPC-231ENST00000557336 R3HDM1Q15032 1099 aaKnown RBP16.05■□□□□ 0.16
HNRNPC-231ENST00000557336 PIK3C2AO00443 1686 aa16.05■□□□□ 0.16
HNRNPC-231ENST00000557336 THRAP3Q9Y2W1 955 aaKnown RBP16.04■□□□□ 0.16
HNRNPC-231ENST00000557336 COL18A1P39060 1754 aa16.04■□□□□ 0.16
HNRNPC-231ENST00000557336 CPSF1Q10570 1443 aaKnown RBP16.03■□□□□ 0.16
HNRNPC-231ENST00000557336 ROCK2O75116 1388 aaKnown RBP16.03■□□□□ 0.16
HNRNPC-231ENST00000557336 TTC21BQ7Z4L5 1316 aa16.03■□□□□ 0.16
HNRNPC-231ENST00000557336 APBA3O96018 575 aa16.03■□□□□ 0.16
HNRNPC-231ENST00000557336 PDE3BQ13370 1112 aa16.03■□□□□ 0.16
HNRNPC-231ENST00000557336 CRB1P82279 1406 aa16.02■□□□□ 0.16
HNRNPC-231ENST00000557336 ARHGEF25Q86VW2 580 aa16.02■□□□□ 0.16
HNRNPC-231ENST00000557336 ZBTB7CA1YPR0 619 aa16■□□□□ 0.15
HNRNPC-231ENST00000557336 RBM42Q9BTD8 480 aaKnown RBP16■□□□□ 0.15
HNRNPC-231ENST00000557336 ZNF692Q9BU19 519 aaPredicted RBP16■□□□□ 0.15
HNRNPC-231ENST00000557336 PARP4Q9UKK3 1724 aaKnown RBP15.99■□□□□ 0.15
HNRNPC-231ENST00000557336 PTF1AQ7RTS3 328 aa15.99■□□□□ 0.15
HNRNPC-231ENST00000557336 PEAK1Q9H792 1746 aa15.99■□□□□ 0.15
HNRNPC-231ENST00000557336 PARD3Q8TEW0 1356 aa15.99■□□□□ 0.15
HNRNPC-231ENST00000557336 SBNO2Q9Y2G9 1366 aa15.98■□□□□ 0.15
HNRNPC-231ENST00000557336 CD163L1Q9NR16 1453 aa15.97■□□□□ 0.15
HNRNPC-231ENST00000557336 WDR17Q8IZU2 1322 aa15.97■□□□□ 0.15
HNRNPC-231ENST00000557336 NFAT5O94916 1531 aa15.97■□□□□ 0.15
HNRNPC-231ENST00000557336 AKAP12Q02952 1782 aa15.97■□□□□ 0.15
HNRNPC-231ENST00000557336 TTC21AQ8NDW8 1320 aa15.96■□□□□ 0.15
HNRNPC-231ENST00000557336 RREB1Q92766 1687 aa15.96■□□□□ 0.15
HNRNPC-231ENST00000557336 TOM1L2Q6ZVM7 507 aa15.96■□□□□ 0.15
HNRNPC-231ENST00000557336 MARCH10Q8NA82 808 aaPredicted RBP15.96■□□□□ 0.15
HNRNPC-231ENST00000557336 KTN1Q86UP2 1357 aaKnown RBP15.96■□□□□ 0.15
HNRNPC-231ENST00000557336 LRRC37A3O60309 1634 aa15.95■□□□□ 0.14
HNRNPC-231ENST00000557336 SOX12O15370 315 aa15.95■□□□□ 0.14
HNRNPC-231ENST00000557336 KCNH5Q8NCM2 988 aa15.95■□□□□ 0.14
HNRNPC-231ENST00000557336 NUP188Q5SRE5 1749 aa15.94■□□□□ 0.14
HNRNPC-231ENST00000557336 SPDYE2BA6NHP3 402 aa15.94■□□□□ 0.14
HNRNPC-231ENST00000557336 SPDYE6P0CI01 402 aa15.94■□□□□ 0.14
HNRNPC-231ENST00000557336 DDB1Q16531 1140 aa15.94■□□□□ 0.14
HNRNPC-231ENST00000557336 SPDYE2Q495Y8 402 aa15.94■□□□□ 0.14
HNRNPC-231ENST00000557336 CARD10Q9BWT7 1032 aa15.94■□□□□ 0.14
HNRNPC-231ENST00000557336 USP31Q70CQ4 1352 aa15.94■□□□□ 0.14
HNRNPC-231ENST00000557336 OVOS2A0A0G2JMS6 1433 aa15.94■□□□□ 0.14
HNRNPC-231ENST00000557336 OVOS2A0A0J9YW53 1432 aa15.94■□□□□ 0.14
HNRNPC-231ENST00000557336 OVOS2Q6IE36 1432 aa15.94■□□□□ 0.14
HNRNPC-231ENST00000557336 CARD11Q9BXL7 1154 aa15.93■□□□□ 0.14
HNRNPC-231ENST00000557336 NME9Q86XW9 330 aa15.92■□□□□ 0.14
HNRNPC-231ENST00000557336 PROM2Q8N271 834 aa15.92■□□□□ 0.14
HNRNPC-231ENST00000557336 SLC12A5Q9H2X9 1139 aa15.92■□□□□ 0.14
HNRNPC-231ENST00000557336 RGPD5Q99666 1765 aa15.92■□□□□ 0.14
HNRNPC-231ENST00000557336 BCL9O00512 1426 aa15.92■□□□□ 0.14
HNRNPC-231ENST00000557336 MON2Q7Z3U7 1717 aa15.91■□□□□ 0.14
HNRNPC-231ENST00000557336 PLSCR1O15162 318 aa15.91■□□□□ 0.14
HNRNPC-231ENST00000557336 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.91■□□□□ 0.14
HNRNPC-231ENST00000557336 SBF2Q86WG5 1849 aa15.9■□□□□ 0.14
HNRNPC-231ENST00000557336 C11orf95C9JLR9 678 aaPredicted RBP15.9■□□□□ 0.14
HNRNPC-231ENST00000557336 BCL11BQ9C0K0 894 aaPredicted RBP15.9■□□□□ 0.14
HNRNPC-231ENST00000557336 TESK2Q96S53 571 aa15.89■□□□□ 0.13
HNRNPC-231ENST00000557336 CDCA7Q9BWT1 371 aaPredicted RBP15.89■□□□□ 0.13
HNRNPC-231ENST00000557336 ANO8Q9HCE9 1232 aaPredicted RBP15.89■□□□□ 0.13
HNRNPC-231ENST00000557336 SSUH2Q9Y2M2 353 aa15.89■□□□□ 0.13
HNRNPC-231ENST00000557336 WNK3Q9BYP7 1800 aa15.89■□□□□ 0.13
HNRNPC-231ENST00000557336 USP54Q70EL1 1684 aa15.88■□□□□ 0.13
HNRNPC-231ENST00000557336 CSB-PGBD3P0DP91 1061 aa15.87■□□□□ 0.13
HNRNPC-231ENST00000557336 NBPF14Q5TI25 921 aa15.87■□□□□ 0.13
HNRNPC-231ENST00000557336 TMC1Q8TDI8 760 aa15.87■□□□□ 0.13
HNRNPC-231ENST00000557336 PDGFDQ9GZP0 370 aaPredicted RBP15.87■□□□□ 0.13
HNRNPC-231ENST00000557336 ABCC6O95255 1503 aa15.87■□□□□ 0.13
HNRNPC-231ENST00000557336 A0A1W2PP64 1363 aa15.87■□□□□ 0.13
HNRNPC-231ENST00000557336 SPDYE4A6NLX3 237 aa15.86■□□□□ 0.13
HNRNPC-231ENST00000557336 PUS7Q96PZ0 661 aaKnown RBP15.86■□□□□ 0.13
HNRNPC-231ENST00000557336 ERBB3P21860 1342 aa15.86■□□□□ 0.13
HNRNPC-231ENST00000557336 TONSLQ96HA7 1378 aa15.86■□□□□ 0.13
HNRNPC-231ENST00000557336 CCDC7Q96M83 1385 aa15.86■□□□□ 0.13
HNRNPC-231ENST00000557336 EDC4Q6P2E9 1401 aaKnown RBP15.85■□□□□ 0.13
HNRNPC-231ENST00000557336 EXOC5O00471 708 aa15.85■□□□□ 0.13
HNRNPC-231ENST00000557336 KCNQ2O43526 872 aa15.85■□□□□ 0.13
HNRNPC-231ENST00000557336 AKT1S1Q96B36 256 aa15.85■□□□□ 0.13
HNRNPC-231ENST00000557336 RGPD3A6NKT7 1758 aaPredicted RBP15.85■□□□□ 0.13
HNRNPC-231ENST00000557336 RGPD4Q7Z3J3 1758 aa15.85■□□□□ 0.13
HNRNPC-231ENST00000557336 TNS2Q63HR2 1409 aa15.84■□□□□ 0.13
HNRNPC-231ENST00000557336 ST20-MTHFSA0A0A6YYL1 179 aa15.83■□□□□ 0.12
HNRNPC-231ENST00000557336 HDGFL2Q7Z4V5 671 aaPredicted RBP15.83■□□□□ 0.12
HNRNPC-231ENST00000557336 ANKRD24Q8TF21 1146 aa15.82■□□□□ 0.12
HNRNPC-231ENST00000557336 NLRP2Q9NX02 1062 aa15.82■□□□□ 0.12
HNRNPC-231ENST00000557336 FBLN1P23142 703 aa15.81■□□□□ 0.12
HNRNPC-231ENST00000557336 TXNRD1Q16881 649 aa15.81■□□□□ 0.12
HNRNPC-231ENST00000557336 SPON1Q9HCB6 807 aa15.81■□□□□ 0.12
HNRNPC-231ENST00000557336 TERF2IPQ9NYB0 399 aa15.81■□□□□ 0.12
HNRNPC-231ENST00000557336 UTRNP46939 3433 aa15.81■□□□□ 0.12
HNRNPC-231ENST00000557336 REM2Q8IYK8 340 aaPredicted RBP15.8■□□□□ 0.12
HNRNPC-231ENST00000557336 IL2RBP14784 551 aa15.79■□□□□ 0.12
HNRNPC-231ENST00000557336 IP6K1Q92551 441 aa15.79■□□□□ 0.12
HNRNPC-231ENST00000557336 LTN1O94822 1766 aa15.79■□□□□ 0.12
HNRNPC-231ENST00000557336 CASZ1Q86V15 1759 aa15.79■□□□□ 0.12
HNRNPC-231ENST00000557336 ACSBG1Q96GR2 724 aa15.78■□□□□ 0.12
HNRNPC-231ENST00000557336 PTGER2P43116 358 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms