RNA–Protein interactions for RNA: ENST00000557057.5

ALKBH1-204, Transcript of alkB homolog 1, histone H2A dioxygenase, humanhuman

TSL 3

Gene ALKBH1, Length 1,750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH1-204ENST00000557057 FOXO3O43524 673 aa23.45■■□□□ 1.34
ALKBH1-204ENST00000557057 KIF24Q5T7B8 1368 aa23.45■■□□□ 1.34
ALKBH1-204ENST00000557057 RIPK4P57078 832 aa23.45■■□□□ 1.34
ALKBH1-204ENST00000557057 CADPS2Q86UW7 1296 aa23.43■■□□□ 1.34
ALKBH1-204ENST00000557057 PHACTR3Q96KR7 559 aa23.43■■□□□ 1.34
ALKBH1-204ENST00000557057 AMPHP49418 695 aa23.42■■□□□ 1.34
ALKBH1-204ENST00000557057 RGPD1P0DJD0 1748 aa23.42■■□□□ 1.34
ALKBH1-204ENST00000557057 NFE2L2Q16236 605 aa23.42■■□□□ 1.34
ALKBH1-204ENST00000557057 MSH6P52701 1360 aa23.41■■□□□ 1.34
ALKBH1-204ENST00000557057 MYH16Q9H6N6 1097 aa23.41■■□□□ 1.34
ALKBH1-204ENST00000557057 IL16Q14005 1332 aa23.4■■□□□ 1.34
ALKBH1-204ENST00000557057 TRPM3Q9HCF6 1732 aaPredicted RBP23.39■■□□□ 1.34
ALKBH1-204ENST00000557057 ARHGEF10O15013 1369 aa23.39■■□□□ 1.34
ALKBH1-204ENST00000557057 SULT6B1Q6IMI4 303 aa23.39■■□□□ 1.33
ALKBH1-204ENST00000557057 KRT28Q7Z3Y7 464 aa23.39■■□□□ 1.33
ALKBH1-204ENST00000557057 NFAT5O94916 1531 aa23.39■■□□□ 1.33
ALKBH1-204ENST00000557057 HOXC9P31274 260 aa23.38■■□□□ 1.33
ALKBH1-204ENST00000557057 XPCQ01831 940 aaPredicted RBP23.38■■□□□ 1.33
ALKBH1-204ENST00000557057 RTL1A6NKG5 1358 aa23.38■■□□□ 1.33
ALKBH1-204ENST00000557057 XIRP1Q702N8 1843 aaKnown RBP23.38■■□□□ 1.33
ALKBH1-204ENST00000557057 AEBP1Q8IUX7 1158 aa23.37■■□□□ 1.33
ALKBH1-204ENST00000557057 KCNH5Q8NCM2 988 aa23.37■■□□□ 1.33
ALKBH1-204ENST00000557057 ZNF335Q9H4Z2 1342 aaPredicted RBP23.37■■□□□ 1.33
ALKBH1-204ENST00000557057 PELP1Q8IZL8 1130 aaKnown RBP23.37■■□□□ 1.33
ALKBH1-204ENST00000557057 PLIN1O60240 522 aa23.36■■□□□ 1.33
ALKBH1-204ENST00000557057 SLIT3O75094 1523 aa23.34■■□□□ 1.33
ALKBH1-204ENST00000557057 IGSF1Q8N6C5 1336 aa23.34■■□□□ 1.33
ALKBH1-204ENST00000557057 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.33■■□□□ 1.33
ALKBH1-204ENST00000557057 USP19O94966 1318 aa23.33■■□□□ 1.32
ALKBH1-204ENST00000557057 FANCIQ9NVI1 1328 aa23.33■■□□□ 1.32
ALKBH1-204ENST00000557057 KDRP35968 1356 aa23.33■■□□□ 1.32
ALKBH1-204ENST00000557057 LMOD3Q0VAK6 560 aa23.32■■□□□ 1.32
ALKBH1-204ENST00000557057 EYA1Q99502 592 aa23.32■■□□□ 1.32
ALKBH1-204ENST00000557057 LTN1O94822 1766 aa23.31■■□□□ 1.32
ALKBH1-204ENST00000557057 IP6K1Q92551 441 aa23.31■■□□□ 1.32
ALKBH1-204ENST00000557057 PHRF1Q9P1Y6 1649 aaKnown RBP23.3■■□□□ 1.32
ALKBH1-204ENST00000557057 B4GALNT3Q6L9W6 998 aa23.3■■□□□ 1.32
ALKBH1-204ENST00000557057 EXOC6Q8TAG9 804 aa23.3■■□□□ 1.32
ALKBH1-204ENST00000557057 NPHP3Q7Z494 1330 aa23.3■■□□□ 1.32
ALKBH1-204ENST00000557057 ALS2Q96Q42 1657 aa23.3■■□□□ 1.32
ALKBH1-204ENST00000557057 BCAR3O75815 825 aa23.29■■□□□ 1.32
ALKBH1-204ENST00000557057 GCP02774 474 aa23.29■■□□□ 1.32
ALKBH1-204ENST00000557057 CALD1Q05682 793 aaKnown RBP23.29■■□□□ 1.32
ALKBH1-204ENST00000557057 TSR2Q969E8 191 aaKnown RBP23.29■■□□□ 1.32
ALKBH1-204ENST00000557057 CT47B1P0C2W7 299 aaPredicted RBP23.29■■□□□ 1.32
ALKBH1-204ENST00000557057 LMOD2Q6P5Q4 547 aa23.29■■□□□ 1.32
ALKBH1-204ENST00000557057 RARSP54136 660 aaKnown RBP23.27■■□□□ 1.32
ALKBH1-204ENST00000557057 DLG5Q8TDM6 1919 aa23.27■■□□□ 1.32
ALKBH1-204ENST00000557057 C20orf194Q5TEA3 1177 aa23.26■■□□□ 1.31
ALKBH1-204ENST00000557057 ARHGEF25Q86VW2 580 aa23.26■■□□□ 1.31
ALKBH1-204ENST00000557057 DDX17Q92841 729 aaKnown RBP23.26■■□□□ 1.31
ALKBH1-204ENST00000557057 PXDNQ92626 1479 aa23.25■■□□□ 1.31
ALKBH1-204ENST00000557057 EXOSC9Q06265 439 aaKnown RBP23.24■■□□□ 1.31
ALKBH1-204ENST00000557057 CRBNQ96SW2 442 aa23.24■■□□□ 1.31
ALKBH1-204ENST00000557057 THUMPD2Q9BTF0 503 aaKnown RBP23.24■■□□□ 1.31
ALKBH1-204ENST00000557057 BRINP3Q76B58 766 aa23.24■■□□□ 1.31
ALKBH1-204ENST00000557057 CCDC136Q96JN2 1154 aa23.24■■□□□ 1.31
ALKBH1-204ENST00000557057 IFT57Q9NWB7 429 aa23.24■■□□□ 1.31
ALKBH1-204ENST00000557057 LTV1Q96GA3 475 aaPredicted RBP23.23■■□□□ 1.31
ALKBH1-204ENST00000557057 TNS3Q68CZ2 1445 aa23.23■■□□□ 1.31
ALKBH1-204ENST00000557057 ZNF853P0CG23 659 aa23.22■■□□□ 1.31
ALKBH1-204ENST00000557057 MED1Q15648 1581 aaPredicted RBP23.22■■□□□ 1.31
ALKBH1-204ENST00000557057 FAM83GA6ND36 823 aa23.22■■□□□ 1.31
ALKBH1-204ENST00000557057 GNAI1P63096 354 aa23.22■■□□□ 1.31
ALKBH1-204ENST00000557057 SLAIN2Q9P270 581 aa23.21■■□□□ 1.31
ALKBH1-204ENST00000557057 ZBTB7CA1YPR0 619 aa23.19■■□□□ 1.3
ALKBH1-204ENST00000557057 MTHFSDQ2M296 383 aaKnown RBP23.19■■□□□ 1.3
ALKBH1-204ENST00000557057 GAS2L2Q8NHY3 880 aa23.19■■□□□ 1.3
ALKBH1-204ENST00000557057 CFAP44Q96MT7 982 aa23.19■■□□□ 1.3
ALKBH1-204ENST00000557057 SPATA31A3Q5VYP0 1347 aa23.19■■□□□ 1.3
ALKBH1-204ENST00000557057 LAS1LQ9Y4W2 734 aaKnown RBP23.19■■□□□ 1.3
ALKBH1-204ENST00000557057 PLEKHG5O94827 1062 aa23.18■■□□□ 1.3
ALKBH1-204ENST00000557057 DCTN1Q14203 1278 aa23.18■■□□□ 1.3
ALKBH1-204ENST00000557057 PDE3AQ14432 1141 aa23.18■■□□□ 1.3
ALKBH1-204ENST00000557057 NBPF6Q5VWK0 638 aa23.16■■□□□ 1.3
ALKBH1-204ENST00000557057 NBPF4Q96M43 638 aa23.16■■□□□ 1.3
ALKBH1-204ENST00000557057 MBIPQ9NS73 344 aa23.16■■□□□ 1.3
ALKBH1-204ENST00000557057 CANXP27824 592 aaKnown RBP23.15■■□□□ 1.3
ALKBH1-204ENST00000557057 BCL2L13Q9BXK5 485 aa23.15■■□□□ 1.3
ALKBH1-204ENST00000557057 MCM10Q7L590 875 aa23.14■■□□□ 1.29
ALKBH1-204ENST00000557057 USHBP1Q8N6Y0 703 aa23.14■■□□□ 1.29
ALKBH1-204ENST00000557057 SOS2Q07890 1332 aaPredicted RBP23.13■■□□□ 1.29
ALKBH1-204ENST00000557057 NCAPD2Q15021 1401 aa23.13■■□□□ 1.29
ALKBH1-204ENST00000557057 FRAT1Q92837 279 aaPredicted RBP23.13■■□□□ 1.29
ALKBH1-204ENST00000557057 ZNF428Q96B54 188 aa23.13■■□□□ 1.29
ALKBH1-204ENST00000557057 HTATSF1O43719 755 aaKnown RBP23.12■■□□□ 1.29
ALKBH1-204ENST00000557057 ZC3H6P61129 1189 aaKnown RBP23.12■■□□□ 1.29
ALKBH1-204ENST00000557057 ANKRD24Q8TF21 1146 aa23.12■■□□□ 1.29
ALKBH1-204ENST00000557057 AXIN2Q9Y2T1 843 aa23.12■■□□□ 1.29
ALKBH1-204ENST00000557057 CRB1P82279 1406 aa23.12■■□□□ 1.29
ALKBH1-204ENST00000557057 SSH1Q8WYL5 1049 aa23.12■■□□□ 1.29
ALKBH1-204ENST00000557057 RTF1Q92541 710 aaKnown RBP23.12■■□□□ 1.29
ALKBH1-204ENST00000557057 SMC4Q9NTJ3 1288 aa23.12■■□□□ 1.29
ALKBH1-204ENST00000557057 ALDH1L2Q3SY69 923 aa23.11■■□□□ 1.29
ALKBH1-204ENST00000557057 LRRC59Q96AG4 307 aaKnown RBP23.11■■□□□ 1.29
ALKBH1-204ENST00000557057 CRYBG1Q9Y4K1 1723 aa23.11■■□□□ 1.29
ALKBH1-204ENST00000557057 CHL1O00533 1208 aa23.1■■□□□ 1.29
ALKBH1-204ENST00000557057 VAMP4O75379 141 aa23.09■■□□□ 1.29
ALKBH1-204ENST00000557057 CABLES1Q8TDN4 633 aa23.09■■□□□ 1.29
ALKBH1-204ENST00000557057 CAMTA1Q9Y6Y1 1673 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms