RNA–Protein interactions for RNA: ENST00000557018.5

PPP4R3A-211, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-211ENST00000557018 TONSLQ96HA7 1378 aa24.29■■□□□ 1.48
PPP4R3A-211ENST00000557018 DDB1Q16531 1140 aa24.27■■□□□ 1.48
PPP4R3A-211ENST00000557018 C11orf95C9JLR9 678 aaPredicted RBP24.26■■□□□ 1.47
PPP4R3A-211ENST00000557018 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.25■■□□□ 1.472e-6■■■□□ 14.9
PPP4R3A-211ENST00000557018 TMC1Q8TDI8 760 aa24.25■■□□□ 1.47
PPP4R3A-211ENST00000557018 CSB-PGBD3P0DP91 1061 aa24.24■■□□□ 1.47
PPP4R3A-211ENST00000557018 OVOS2A0A0G2JMS6 1433 aa24.24■■□□□ 1.47
PPP4R3A-211ENST00000557018 OVOS2A0A0J9YW53 1432 aa24.24■■□□□ 1.47
PPP4R3A-211ENST00000557018 OVOS2Q6IE36 1432 aa24.24■■□□□ 1.47
PPP4R3A-211ENST00000557018 CDCA7Q9BWT1 371 aaPredicted RBP24.22■■□□□ 1.47
PPP4R3A-211ENST00000557018 PCGF6Q9BYE7 350 aa24.22■■□□□ 1.47
PPP4R3A-211ENST00000557018 MON2Q7Z3U7 1717 aa24.21■■□□□ 1.47
PPP4R3A-211ENST00000557018 LRRC37A3O60309 1634 aa24.21■■□□□ 1.47
PPP4R3A-211ENST00000557018 NFAT5O94916 1531 aa24.21■■□□□ 1.47
PPP4R3A-211ENST00000557018 CD163L1Q9NR16 1453 aa24.21■■□□□ 1.47
PPP4R3A-211ENST00000557018 CARD10Q9BWT7 1032 aa24.21■■□□□ 1.47
PPP4R3A-211ENST00000557018 SLC12A5Q9H2X9 1139 aa24.21■■□□□ 1.47
PPP4R3A-211ENST00000557018 USP31Q70CQ4 1352 aa24.2■■□□□ 1.46
PPP4R3A-211ENST00000557018 NBPF14Q5TI25 921 aa24.2■■□□□ 1.46
PPP4R3A-211ENST00000557018 HDGFL2Q7Z4V5 671 aaPredicted RBP24.2■■□□□ 1.46
PPP4R3A-211ENST00000557018 NME9Q86XW9 330 aa24.2■■□□□ 1.46
PPP4R3A-211ENST00000557018 PEAK1Q9H792 1746 aa24.19■■□□□ 1.46
PPP4R3A-211ENST00000557018 RREB1Q92766 1687 aa24.19■■□□□ 1.46
PPP4R3A-211ENST00000557018 RGPD5Q99666 1765 aa24.19■■□□□ 1.46
PPP4R3A-211ENST00000557018 MARCH10Q8NA82 808 aaPredicted RBP24.18■■□□□ 1.46
PPP4R3A-211ENST00000557018 NUP188Q5SRE5 1749 aa24.16■■□□□ 1.46
PPP4R3A-211ENST00000557018 PUS7Q96PZ0 661 aaKnown RBP24.15■■□□□ 1.46
PPP4R3A-211ENST00000557018 BCL11BQ9C0K0 894 aaPredicted RBP24.15■■□□□ 1.46
PPP4R3A-211ENST00000557018 TERF2IPQ9NYB0 399 aa24.15■■□□□ 1.46
PPP4R3A-211ENST00000557018 CCDC7Q96M83 1385 aa24.15■■□□□ 1.46
PPP4R3A-211ENST00000557018 WNK3Q9BYP7 1800 aa24.14■■□□□ 1.46
PPP4R3A-211ENST00000557018 EXOC5O00471 708 aa24.14■■□□□ 1.45
PPP4R3A-211ENST00000557018 PLSCR1O15162 318 aa24.14■■□□□ 1.45
PPP4R3A-211ENST00000557018 PTF1AQ7RTS3 328 aa24.14■■□□□ 1.45
PPP4R3A-211ENST00000557018 ABCC6O95255 1503 aa24.14■■□□□ 1.45
PPP4R3A-211ENST00000557018 EDC4Q6P2E9 1401 aaKnown RBP24.13■■□□□ 1.45
PPP4R3A-211ENST00000557018 A0A1W2PP64 1363 aa24.13■■□□□ 1.45
PPP4R3A-211ENST00000557018 ST20-MTHFSA0A0A6YYL1 179 aa24.12■■□□□ 1.45
PPP4R3A-211ENST00000557018 TESK2Q96S53 571 aa24.12■■□□□ 1.45
PPP4R3A-211ENST00000557018 SBF2Q86WG5 1849 aa24.12■■□□□ 1.45
PPP4R3A-211ENST00000557018 USP54Q70EL1 1684 aa24.11■■□□□ 1.45
PPP4R3A-211ENST00000557018 BCL9O00512 1426 aa24.11■■□□□ 1.45
PPP4R3A-211ENST00000557018 ERBB3P21860 1342 aa24.1■■□□□ 1.45
PPP4R3A-211ENST00000557018 NLRP2Q9NX02 1062 aa24.1■■□□□ 1.45
PPP4R3A-211ENST00000557018 CLSPNQ9HAW4 1339 aa24.09■■□□□ 1.45
PPP4R3A-211ENST00000557018 ANKRD24Q8TF21 1146 aa24.07■■□□□ 1.44
PPP4R3A-211ENST00000557018 SLC24A1O60721 1099 aa24.06■■□□□ 1.44
PPP4R3A-211ENST00000557018 TNS2Q63HR2 1409 aa24.06■■□□□ 1.44
PPP4R3A-211ENST00000557018 RGPD3A6NKT7 1758 aaPredicted RBP24.06■■□□□ 1.44
PPP4R3A-211ENST00000557018 LTN1O94822 1766 aa24.06■■□□□ 1.44
PPP4R3A-211ENST00000557018 RGPD4Q7Z3J3 1758 aa24.06■■□□□ 1.44
PPP4R3A-211ENST00000557018 NINLQ9Y2I6 1382 aa24.05■■□□□ 1.44
PPP4R3A-211ENST00000557018 PROM2Q8N271 834 aa24.05■■□□□ 1.44
PPP4R3A-211ENST00000557018 IL2RBP14784 551 aa24.04■■□□□ 1.44
PPP4R3A-211ENST00000557018 ANO8Q9HCE9 1232 aaPredicted RBP24.03■■□□□ 1.44
PPP4R3A-211ENST00000557018 KCNQ2O43526 872 aa24.02■■□□□ 1.44
PPP4R3A-211ENST00000557018 SPON1Q9HCB6 807 aa24.02■■□□□ 1.44
PPP4R3A-211ENST00000557018 IP6K1Q92551 441 aa24.01■■□□□ 1.43
PPP4R3A-211ENST00000557018 COG3Q96JB2 828 aa24.01■■□□□ 1.43
PPP4R3A-211ENST00000557018 TXNRD1Q16881 649 aa24■■□□□ 1.43
PPP4R3A-211ENST00000557018 LTV1Q96GA3 475 aaPredicted RBP23.99■■□□□ 1.43
PPP4R3A-211ENST00000557018 ACSBG1Q96GR2 724 aa23.99■■□□□ 1.43
PPP4R3A-211ENST00000557018 PPP1R1BQ9UD71 204 aaPredicted RBP23.98■■□□□ 1.43
PPP4R3A-211ENST00000557018 TMF1P82094 1093 aa23.97■■□□□ 1.43
PPP4R3A-211ENST00000557018 ANKRD36BQ8N2N9 1353 aa23.97■■□□□ 1.43
PPP4R3A-211ENST00000557018 USP47Q96K76 1375 aa23.96■■□□□ 1.43
PPP4R3A-211ENST00000557018 FBLN1P23142 703 aa23.96■■□□□ 1.43
PPP4R3A-211ENST00000557018 MAP3K19Q56UN5 1328 aa23.95■■□□□ 1.42
PPP4R3A-211ENST00000557018 PDGFDQ9GZP0 370 aaPredicted RBP23.95■■□□□ 1.42
PPP4R3A-211ENST00000557018 HOXC9P31274 260 aa23.94■■□□□ 1.42
PPP4R3A-211ENST00000557018 STK32BQ9NY57 414 aa23.94■■□□□ 1.42
PPP4R3A-211ENST00000557018 TIMELESSQ9UNS1 1208 aa23.94■■□□□ 1.42
PPP4R3A-211ENST00000557018 NHSQ6T4R5 1651 aa23.93■■□□□ 1.42
PPP4R3A-211ENST00000557018 AMPHP49418 695 aa23.93■■□□□ 1.42
PPP4R3A-211ENST00000557018 SLC15A2Q16348 729 aa23.92■■□□□ 1.42
PPP4R3A-211ENST00000557018 FYB1O15117 783 aa23.9■■□□□ 1.42
PPP4R3A-211ENST00000557018 ZBTB7AO95365 584 aa23.9■■□□□ 1.42
PPP4R3A-211ENST00000557018 CCER1Q8TC90 406 aaPredicted RBP23.9■■□□□ 1.42
PPP4R3A-211ENST00000557018 DDX54Q8TDD1 881 aaKnown RBP23.9■■□□□ 1.42
PPP4R3A-211ENST00000557018 GGNBP2Q9H3C7 697 aa23.9■■□□□ 1.42
PPP4R3A-211ENST00000557018 CASZ1Q86V15 1759 aa23.9■■□□□ 1.42
PPP4R3A-211ENST00000557018 RRS1Q15050 365 aaKnown RBP23.88■■□□□ 1.41
PPP4R3A-211ENST00000557018 CDCA8Q53HL2 280 aa23.88■■□□□ 1.41
PPP4R3A-211ENST00000557018 FAM208AQ9UK61 1670 aaKnown RBP23.88■■□□□ 1.41
PPP4R3A-211ENST00000557018 ATF5Q9Y2D1 282 aaPredicted RBP23.86■■□□□ 1.41
PPP4R3A-211ENST00000557018 BTAF1O14981 1849 aa23.84■■□□□ 1.41
PPP4R3A-211ENST00000557018 KAT6BQ8WYB5 2073 aa23.84■■□□□ 1.41
PPP4R3A-211ENST00000557018 RTL1A6NKG5 1358 aa23.84■■□□□ 1.41
PPP4R3A-211ENST00000557018 PTGER2P43116 358 aa23.83■■□□□ 1.41
PPP4R3A-211ENST00000557018 NBPF6Q5VWK0 638 aa23.82■■□□□ 1.4
PPP4R3A-211ENST00000557018 ZCRB1Q8TBF4 217 aaKnown RBP23.82■■□□□ 1.4
PPP4R3A-211ENST00000557018 NBPF4Q96M43 638 aa23.82■■□□□ 1.4
PPP4R3A-211ENST00000557018 LRRC4BQ9NT99 713 aa23.82■■□□□ 1.4
PPP4R3A-211ENST00000557018 DCAF8L1A6NGE4 600 aa23.81■■□□□ 1.4
PPP4R3A-211ENST00000557018 SYTL4Q96C24 671 aaPredicted RBP23.81■■□□□ 1.4
PPP4R3A-211ENST00000557018 RGPD2P0DJD1 1756 aa23.8■■□□□ 1.4
PPP4R3A-211ENST00000557018 MTFR1LQ9H019 292 aa23.8■■□□□ 1.4
PPP4R3A-211ENST00000557018 MEGF6O75095 1541 aa23.79■■□□□ 1.4
PPP4R3A-211ENST00000557018 PRIM1P49642 420 aaKnown RBP23.79■■□□□ 1.4
PPP4R3A-211ENST00000557018 ZNF827Q17R98 1081 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms