RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 COL5A2P05997 1499 aaPredicted RBP19.57■□□□□ 0.72
SLIRP-207ENST00000556831 ONECUT3O60422 494 aaPredicted RBP19.57■□□□□ 0.72
SLIRP-207ENST00000556831 EVA1CP58658 441 aa19.57■□□□□ 0.72
SLIRP-207ENST00000556831 AXIN2Q9Y2T1 843 aa19.57■□□□□ 0.72
SLIRP-207ENST00000556831 HSPA5P11021 654 aaKnown RBP19.56■□□□□ 0.72
SLIRP-207ENST00000556831 SPATA31A1Q5TZJ5 1347 aa19.55■□□□□ 0.72
SLIRP-207ENST00000556831 FAM182BQ5T319 152 aa19.55■□□□□ 0.72
SLIRP-207ENST00000556831 USP35Q9P2H5 1018 aa19.55■□□□□ 0.72
SLIRP-207ENST00000556831 USP31Q70CQ4 1352 aa19.55■□□□□ 0.72
SLIRP-207ENST00000556831 OVOS2A0A0J9YW53 1432 aa19.54■□□□□ 0.72
SLIRP-207ENST00000556831 OVOS2Q6IE36 1432 aa19.54■□□□□ 0.72
SLIRP-207ENST00000556831 LTN1O94822 1766 aa19.53■□□□□ 0.72
SLIRP-207ENST00000556831 ARHGEF25Q86VW2 580 aa19.53■□□□□ 0.72
SLIRP-207ENST00000556831 FBLN1P23142 703 aa19.52■□□□□ 0.72
SLIRP-207ENST00000556831 AATKQ6ZMQ8 1374 aa19.52■□□□□ 0.72
SLIRP-207ENST00000556831 SF3B2Q13435 895 aaKnown RBP19.51■□□□□ 0.71
SLIRP-207ENST00000556831 COG3Q96JB2 828 aa19.5■□□□□ 0.71
SLIRP-207ENST00000556831 CARD14Q9BXL6 1004 aa19.49■□□□□ 0.71
SLIRP-207ENST00000556831 C11orf95C9JLR9 678 aaPredicted RBP19.48■□□□□ 0.71
SLIRP-207ENST00000556831 KRT27Q7Z3Y8 459 aa19.48■□□□□ 0.71
SLIRP-207ENST00000556831 KIF20BQ96Q89 1820 aa19.46■□□□□ 0.71
SLIRP-207ENST00000556831 WNK3Q9BYP7 1800 aa19.46■□□□□ 0.71
SLIRP-207ENST00000556831 ABCC6O95255 1503 aa19.46■□□□□ 0.71
SLIRP-207ENST00000556831 DCAF8L1A6NGE4 600 aa19.46■□□□□ 0.71
SLIRP-207ENST00000556831 CSB-PGBD3P0DP91 1061 aa19.46■□□□□ 0.71
SLIRP-207ENST00000556831 CRB1P82279 1406 aa19.45■□□□□ 0.7
SLIRP-207ENST00000556831 NSD3Q9BZ95 1437 aa19.45■□□□□ 0.7
SLIRP-207ENST00000556831 GGNBP2Q9H3C7 697 aa19.45■□□□□ 0.7
SLIRP-207ENST00000556831 LRRC37A3O60309 1634 aa19.43■□□□□ 0.7
SLIRP-207ENST00000556831 PARP4Q9UKK3 1724 aaKnown RBP19.43■□□□□ 0.7
SLIRP-207ENST00000556831 FYB1O15117 783 aa19.43■□□□□ 0.7
SLIRP-207ENST00000556831 TOM1L2Q6ZVM7 507 aa19.43■□□□□ 0.7
SLIRP-207ENST00000556831 DEFB132Q7Z7B7 95 aa19.43■□□□□ 0.7
SLIRP-207ENST00000556831 TCP11L2Q8N4U5 519 aa19.43■□□□□ 0.7
SLIRP-207ENST00000556831 WDR17Q8IZU2 1322 aa19.43■□□□□ 0.7
SLIRP-207ENST00000556831 PSDA5PKW4 1024 aaPredicted RBP19.42■□□□□ 0.7
SLIRP-207ENST00000556831 BARGINQ6ZT62 677 aa19.42■□□□□ 0.7
SLIRP-207ENST00000556831 THRAP3Q9Y2W1 955 aaKnown RBP19.41■□□□□ 0.7
SLIRP-207ENST00000556831 CGNL1Q0VF96 1302 aa19.41■□□□□ 0.7
SLIRP-207ENST00000556831 TNS1Q9HBL0 1735 aaKnown RBP19.4■□□□□ 0.7
SLIRP-207ENST00000556831 PEAK1Q9H792 1746 aa19.39■□□□□ 0.7
SLIRP-207ENST00000556831 C1QTNF8P60827 252 aa19.39■□□□□ 0.69
SLIRP-207ENST00000556831 MAP3K19Q56UN5 1328 aa19.39■□□□□ 0.69
SLIRP-207ENST00000556831 RGPD2P0DJD1 1756 aa19.39■□□□□ 0.69
SLIRP-207ENST00000556831 DISP2A7MBM2 1401 aa19.38■□□□□ 0.69
SLIRP-207ENST00000556831 AMPHP49418 695 aa19.38■□□□□ 0.69
SLIRP-207ENST00000556831 RRS1Q15050 365 aaKnown RBP19.38■□□□□ 0.69
SLIRP-207ENST00000556831 ERBB3P21860 1342 aa19.37■□□□□ 0.69
SLIRP-207ENST00000556831 PDE3BQ13370 1112 aa19.36■□□□□ 0.69
SLIRP-207ENST00000556831 ANKRD24Q8TF21 1146 aa19.36■□□□□ 0.69
SLIRP-207ENST00000556831 LTV1Q96GA3 475 aaPredicted RBP19.35■□□□□ 0.69
SLIRP-207ENST00000556831 RGPD1P0DJD0 1748 aa19.34■□□□□ 0.69
SLIRP-207ENST00000556831 RTL1A6NKG5 1358 aa19.34■□□□□ 0.69
SLIRP-207ENST00000556831 CCDC7Q96M83 1385 aa19.34■□□□□ 0.69
SLIRP-207ENST00000556831 KIF7Q2M1P5 1343 aa19.34■□□□□ 0.69
SLIRP-207ENST00000556831 IP6K1Q92551 441 aa19.34■□□□□ 0.69
SLIRP-207ENST00000556831 CARD10Q9BWT7 1032 aa19.34■□□□□ 0.69
SLIRP-207ENST00000556831 PANK3Q9H999 370 aa19.34■□□□□ 0.69
SLIRP-207ENST00000556831 NLRP2Q9NX02 1062 aa19.34■□□□□ 0.69
SLIRP-207ENST00000556831 SMG6Q86US8 1419 aaKnown RBP19.34■□□□□ 0.69
SLIRP-207ENST00000556831 HOXC9P31274 260 aa19.33■□□□□ 0.68
SLIRP-207ENST00000556831 ZNF784Q8NCA9 323 aaPredicted RBP19.33■□□□□ 0.68
SLIRP-207ENST00000556831 CDCA7Q9BWT1 371 aaPredicted RBP19.33■□□□□ 0.68
SLIRP-207ENST00000556831 FAM208AQ9UK61 1670 aaKnown RBP19.33■□□□□ 0.68
SLIRP-207ENST00000556831 TRIM37O94972 964 aa19.32■□□□□ 0.68
SLIRP-207ENST00000556831 PTF1AQ7RTS3 328 aa19.32■□□□□ 0.68
SLIRP-207ENST00000556831 KNSTRNQ9Y448 316 aa19.32■□□□□ 0.68
SLIRP-207ENST00000556831 CEP350Q5VT06 3117 aa19.31■□□□□ 0.68
SLIRP-207ENST00000556831 ANKRD26Q9UPS8 1709 aa19.31■□□□□ 0.68
SLIRP-207ENST00000556831 BAG6P46379 1132 aa19.31■□□□□ 0.68
SLIRP-207ENST00000556831 NSD2O96028 1365 aa19.31■□□□□ 0.68
SLIRP-207ENST00000556831 DDB1Q16531 1140 aa19.3■□□□□ 0.68
SLIRP-207ENST00000556831 MARCH10Q8NA82 808 aaPredicted RBP19.3■□□□□ 0.68
SLIRP-207ENST00000556831 EMILIN1Q9Y6C2 1016 aa19.3■□□□□ 0.68
SLIRP-207ENST00000556831 SBF2Q86WG5 1849 aa19.3■□□□□ 0.68
SLIRP-207ENST00000556831 EN1Q05925 392 aaPredicted RBP19.29■□□□□ 0.68
SLIRP-207ENST00000556831 KIF24Q5T7B8 1368 aa19.29■□□□□ 0.68
SLIRP-207ENST00000556831 HSP90AB2PQ58FF8 381 aa19.28■□□□□ 0.68
SLIRP-207ENST00000556831 FLT4P35916 1363 aa19.28■□□□□ 0.68
SLIRP-207ENST00000556831 PPM1GO15355 546 aaPredicted RBP19.27■□□□□ 0.68
SLIRP-207ENST00000556831 FAM196AQ6ZSG2 479 aa19.27■□□□□ 0.68
SLIRP-207ENST00000556831 USHBP1Q8N6Y0 703 aa19.27■□□□□ 0.68
SLIRP-207ENST00000556831 TNS2Q63HR2 1409 aa19.26■□□□□ 0.67
SLIRP-207ENST00000556831 MAP2P11137 1827 aaKnown RBP19.26■□□□□ 0.67
SLIRP-207ENST00000556831 OVOS2A0A0G2JMS6 1433 aa19.25■□□□□ 0.67
SLIRP-207ENST00000556831 TNNT2P45379 298 aaPredicted RBP19.25■□□□□ 0.67
SLIRP-207ENST00000556831 SHANK3Q9BYB0 1731 aa19.25■□□□□ 0.67
SLIRP-207ENST00000556831 MEGF6O75095 1541 aa19.25■□□□□ 0.67
SLIRP-207ENST00000556831 IL2RBP14784 551 aa19.24■□□□□ 0.67
SLIRP-207ENST00000556831 EZH2Q15910 746 aaKnown RBP19.24■□□□□ 0.67
SLIRP-207ENST00000556831 NBPF6Q5VWK0 638 aa19.24■□□□□ 0.67
SLIRP-207ENST00000556831 MORC1Q86VD1 984 aa19.24■□□□□ 0.67
SLIRP-207ENST00000556831 NBPF4Q96M43 638 aa19.24■□□□□ 0.67
SLIRP-207ENST00000556831 INSRP06213 1382 aa19.23■□□□□ 0.67
SLIRP-207ENST00000556831 EXOC5O00471 708 aa19.23■□□□□ 0.67
SLIRP-207ENST00000556831 R3HDM1Q15032 1099 aaKnown RBP19.23■□□□□ 0.67
SLIRP-207ENST00000556831 WASHC2AQ641Q2 1341 aa19.22■□□□□ 0.67
SLIRP-207ENST00000556831 RREB1Q92766 1687 aa19.21■□□□□ 0.67
SLIRP-207ENST00000556831 APBA3O96018 575 aa19.21■□□□□ 0.67
SLIRP-207ENST00000556831 CAMKK2Q96RR4 588 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms