RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 AXIN2Q9Y2T1 843 aa21.05■□□□□ 0.96
ACTN1-217ENST00000556203 USP54Q70EL1 1684 aa21.05■□□□□ 0.96
ACTN1-217ENST00000556203 FYB1O15117 783 aa21.04■□□□□ 0.96
ACTN1-217ENST00000556203 NSD3Q9BZ95 1437 aa21.04■□□□□ 0.96
ACTN1-217ENST00000556203 UPF1Q92900 1129 aaKnown RBP eCLIP21.03■□□□□ 0.96
ACTN1-217ENST00000556203 GGNBP2Q9H3C7 697 aa21.03■□□□□ 0.96
ACTN1-217ENST00000556203 TCP11L2Q8N4U5 519 aa21■□□□□ 0.95
ACTN1-217ENST00000556203 COL18A1P39060 1754 aa21■□□□□ 0.95
ACTN1-217ENST00000556203 CRB1P82279 1406 aa20.99■□□□□ 0.95
ACTN1-217ENST00000556203 TOM1L2Q6ZVM7 507 aa20.99■□□□□ 0.95
ACTN1-217ENST00000556203 CSB-PGBD3P0DP91 1061 aa20.98■□□□□ 0.95
ACTN1-217ENST00000556203 BARGINQ6ZT62 677 aa20.98■□□□□ 0.95
ACTN1-217ENST00000556203 KRT27Q7Z3Y8 459 aa20.98■□□□□ 0.95
ACTN1-217ENST00000556203 PANK3Q9H999 370 aa20.98■□□□□ 0.95
ACTN1-217ENST00000556203 KIF7Q2M1P5 1343 aa20.98■□□□□ 0.95
ACTN1-217ENST00000556203 WDR17Q8IZU2 1322 aa20.98■□□□□ 0.95
ACTN1-217ENST00000556203 FBLN1P23142 703 aa20.97■□□□□ 0.95
ACTN1-217ENST00000556203 ABCC6O95255 1503 aa20.97■□□□□ 0.95
ACTN1-217ENST00000556203 THRAP3Q9Y2W1 955 aaKnown RBP20.96■□□□□ 0.95
ACTN1-217ENST00000556203 CGNL1Q0VF96 1302 aa20.96■□□□□ 0.95
ACTN1-217ENST00000556203 MAP3K19Q56UN5 1328 aa20.95■□□□□ 0.94
ACTN1-217ENST00000556203 THSD7AQ9UPZ6 1657 aa20.94■□□□□ 0.94
ACTN1-217ENST00000556203 AMPHP49418 695 aa20.93■□□□□ 0.94
ACTN1-217ENST00000556203 RRS1Q15050 365 aaKnown RBP20.93■□□□□ 0.94
ACTN1-217ENST00000556203 IP6K1Q92551 441 aa20.93■□□□□ 0.94
ACTN1-217ENST00000556203 ERBB3P21860 1342 aa20.93■□□□□ 0.94
ACTN1-217ENST00000556203 ANKRD24Q8TF21 1146 aa20.92■□□□□ 0.94
ACTN1-217ENST00000556203 CARD10Q9BWT7 1032 aa20.92■□□□□ 0.94
ACTN1-217ENST00000556203 BRWD3Q6RI45 1802 aa20.92■□□□□ 0.94
ACTN1-217ENST00000556203 BLMP54132 1417 aaPredicted RBP20.91■□□□□ 0.94
ACTN1-217ENST00000556203 KIF20BQ96Q89 1820 aa20.91■□□□□ 0.94
ACTN1-217ENST00000556203 LTN1O94822 1766 aa20.9■□□□□ 0.94
ACTN1-217ENST00000556203 HOXC9P31274 260 aa20.9■□□□□ 0.94
ACTN1-217ENST00000556203 FAM182BQ5T319 152 aa20.89■□□□□ 0.93
ACTN1-217ENST00000556203 LTV1Q96GA3 475 aaPredicted RBP20.89■□□□□ 0.93
ACTN1-217ENST00000556203 NLRP2Q9NX02 1062 aa20.89■□□□□ 0.93
ACTN1-217ENST00000556203 RGPD5Q99666 1765 aa20.89■□□□□ 0.93
ACTN1-217ENST00000556203 CCDC7Q96M83 1385 aa20.88■□□□□ 0.93
ACTN1-217ENST00000556203 PDE3BQ13370 1112 aa20.88■□□□□ 0.93
ACTN1-217ENST00000556203 RTL1A6NKG5 1358 aa20.87■□□□□ 0.93
ACTN1-217ENST00000556203 WASHC2AQ641Q2 1341 aa20.86■□□□□ 0.93
ACTN1-217ENST00000556203 CCDC125Q86Z20 511 aa20.86■□□□□ 0.93
ACTN1-217ENST00000556203 CDCA7Q9BWT1 371 aaPredicted RBP20.85■□□□□ 0.93
ACTN1-217ENST00000556203 KNSTRNQ9Y448 316 aa20.85■□□□□ 0.93
ACTN1-217ENST00000556203 NSD2O96028 1365 aa20.84■□□□□ 0.93
ACTN1-217ENST00000556203 TNNT2P45379 298 aaPredicted RBP20.83■□□□□ 0.93
ACTN1-217ENST00000556203 DDB1Q16531 1140 aa20.83■□□□□ 0.93
ACTN1-217ENST00000556203 EMILIN1Q9Y6C2 1016 aa20.83■□□□□ 0.93
ACTN1-217ENST00000556203 DISP2A7MBM2 1401 aa20.83■□□□□ 0.93
ACTN1-217ENST00000556203 FLT4P35916 1363 aa20.83■□□□□ 0.92
ACTN1-217ENST00000556203 PPM1GO15355 546 aaPredicted RBP20.82■□□□□ 0.92
ACTN1-217ENST00000556203 HSP90AB2PQ58FF8 381 aa20.82■□□□□ 0.92
ACTN1-217ENST00000556203 KIF24Q5T7B8 1368 aa20.82■□□□□ 0.92
ACTN1-217ENST00000556203 SF3B2Q13435 895 aaKnown RBP20.81■□□□□ 0.92
ACTN1-217ENST00000556203 FAM196AQ6ZSG2 479 aa20.81■□□□□ 0.92
ACTN1-217ENST00000556203 PARP4Q9UKK3 1724 aaKnown RBP20.8■□□□□ 0.92
ACTN1-217ENST00000556203 INSRP06213 1382 aa20.8■□□□□ 0.92
ACTN1-217ENST00000556203 LRRC37A3O60309 1634 aa20.79■□□□□ 0.92
ACTN1-217ENST00000556203 IL2RBP14784 551 aa20.79■□□□□ 0.92
ACTN1-217ENST00000556203 AMER1Q5JTC6 1135 aaPredicted RBP20.79■□□□□ 0.92
ACTN1-217ENST00000556203 MORC1Q86VD1 984 aa20.79■□□□□ 0.92
ACTN1-217ENST00000556203 POLKQ9UBT6 870 aa20.79■□□□□ 0.92
ACTN1-217ENST00000556203 EP400Q96L91 3159 aa20.79■□□□□ 0.92
ACTN1-217ENST00000556203 SMG6Q86US8 1419 aaKnown RBP20.78■□□□□ 0.92
ACTN1-217ENST00000556203 PEAK1Q9H792 1746 aa20.78■□□□□ 0.92
ACTN1-217ENST00000556203 EXOC5O00471 708 aa20.78■□□□□ 0.92
ACTN1-217ENST00000556203 PER1O15534 1290 aaPredicted RBP20.77■□□□□ 0.92
ACTN1-217ENST00000556203 WNK3Q9BYP7 1800 aa20.76■□□□□ 0.91
ACTN1-217ENST00000556203 TRIM37O94972 964 aa20.76■□□□□ 0.91
ACTN1-217ENST00000556203 NBPF6Q5VWK0 638 aa20.76■□□□□ 0.91
ACTN1-217ENST00000556203 DEFB132Q7Z7B7 95 aa20.76■□□□□ 0.91
ACTN1-217ENST00000556203 NBPF4Q96M43 638 aa20.76■□□□□ 0.91
ACTN1-217ENST00000556203 ANKRD26Q9UPS8 1709 aa20.75■□□□□ 0.91
ACTN1-217ENST00000556203 MARCH10Q8NA82 808 aaPredicted RBP20.75■□□□□ 0.91
ACTN1-217ENST00000556203 OVOS2A0A0G2JMS6 1433 aa20.75■□□□□ 0.91
ACTN1-217ENST00000556203 FAM208AQ9UK61 1670 aaKnown RBP20.74■□□□□ 0.91
ACTN1-217ENST00000556203 TNS2Q63HR2 1409 aa20.74■□□□□ 0.91
ACTN1-217ENST00000556203 USHBP1Q8N6Y0 703 aa20.74■□□□□ 0.91
ACTN1-217ENST00000556203 BAG6P46379 1132 aa20.72■□□□□ 0.91
ACTN1-217ENST00000556203 CC2D1BQ5T0F9 858 aaKnown RBP20.72■□□□□ 0.91
ACTN1-217ENST00000556203 CNGB1Q14028 1251 aaPredicted RBP20.69■□□□□ 0.9
ACTN1-217ENST00000556203 MEGF6O75095 1541 aa20.68■□□□□ 0.9
ACTN1-217ENST00000556203 RGPD1P0DJD0 1748 aa20.68■□□□□ 0.9
ACTN1-217ENST00000556203 APBA3O96018 575 aa20.68■□□□□ 0.9
ACTN1-217ENST00000556203 EN1Q05925 392 aaPredicted RBP20.68■□□□□ 0.9
ACTN1-217ENST00000556203 EIF4A2Q14240 407 aaKnown RBP20.68■□□□□ 0.9
ACTN1-217ENST00000556203 RAPGEF4Q8WZA2 1011 aa20.68■□□□□ 0.9
ACTN1-217ENST00000556203 MAP2P11137 1827 aaKnown RBP20.68■□□□□ 0.9
ACTN1-217ENST00000556203 NPC1L1Q9UHC9 1359 aa20.68■□□□□ 0.9
ACTN1-217ENST00000556203 BCL9O00512 1426 aa20.68■□□□□ 0.9
ACTN1-217ENST00000556203 ZEB1P37275 1124 aaPredicted RBP20.67■□□□□ 0.9
ACTN1-217ENST00000556203 RGPD2P0DJD1 1756 aa20.67■□□□□ 0.9
ACTN1-217ENST00000556203 DDX54Q8TDD1 881 aaKnown RBP20.66■□□□□ 0.9
ACTN1-217ENST00000556203 EYA1Q99502 592 aa20.66■□□□□ 0.9
ACTN1-217ENST00000556203 TATP17735 454 aaPredicted RBP20.65■□□□□ 0.9
ACTN1-217ENST00000556203 ZCRB1Q8TBF4 217 aaKnown RBP20.65■□□□□ 0.9
ACTN1-217ENST00000556203 TNS1Q9HBL0 1735 aaKnown RBP20.64■□□□□ 0.9
ACTN1-217ENST00000556203 PTF1AQ7RTS3 328 aa20.63■□□□□ 0.89
ACTN1-217ENST00000556203 BCL11BQ9C0K0 894 aaPredicted RBP20.63■□□□□ 0.89
ACTN1-217ENST00000556203 NCAPD2Q15021 1401 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms