RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 RGPD5Q99666 1765 aa26.81■■□□□ 1.88
CDKN3-209ENST00000556102 TOM1L2Q6ZVM7 507 aa26.8■■□□□ 1.88
CDKN3-209ENST00000556102 AXIN2Q9Y2T1 843 aa26.8■■□□□ 1.88
CDKN3-209ENST00000556102 WDR17Q8IZU2 1322 aa26.8■■□□□ 1.88
CDKN3-209ENST00000556102 PEAK1Q9H792 1746 aa26.79■■□□□ 1.88
CDKN3-209ENST00000556102 NUP188Q5SRE5 1749 aa26.79■■□□□ 1.88
CDKN3-209ENST00000556102 OVOS2A0A0G2JMS6 1433 aa26.78■■□□□ 1.88
CDKN3-209ENST00000556102 OVOS2A0A0J9YW53 1432 aa26.78■■□□□ 1.88
CDKN3-209ENST00000556102 OVOS2Q6IE36 1432 aa26.78■■□□□ 1.88
CDKN3-209ENST00000556102 NFAT5O94916 1531 aa26.78■■□□□ 1.88
CDKN3-209ENST00000556102 TONSLQ96HA7 1378 aa26.76■■□□□ 1.87
CDKN3-209ENST00000556102 SOX12O15370 315 aa26.76■■□□□ 1.87
CDKN3-209ENST00000556102 SBF2Q86WG5 1849 aa26.76■■□□□ 1.87
CDKN3-209ENST00000556102 DDB1Q16531 1140 aa26.75■■□□□ 1.87
CDKN3-209ENST00000556102 USP54Q70EL1 1684 aa26.75■■□□□ 1.87
CDKN3-209ENST00000556102 ABCC6O95255 1503 aa26.75■■□□□ 1.87
CDKN3-209ENST00000556102 CDCA7Q9BWT1 371 aaPredicted RBP26.73■■□□□ 1.87
CDKN3-209ENST00000556102 CD163L1Q9NR16 1453 aa26.73■■□□□ 1.87
CDKN3-209ENST00000556102 USP31Q70CQ4 1352 aa26.72■■□□□ 1.87
CDKN3-209ENST00000556102 CARD10Q9BWT7 1032 aa26.71■■□□□ 1.87
CDKN3-209ENST00000556102 RGPD3A6NKT7 1758 aaPredicted RBP26.71■■□□□ 1.87
CDKN3-209ENST00000556102 RGPD4Q7Z3J3 1758 aa26.71■■□□□ 1.87
CDKN3-209ENST00000556102 CSB-PGBD3P0DP91 1061 aa26.7■■□□□ 1.86
CDKN3-209ENST00000556102 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.7■■□□□ 1.86
CDKN3-209ENST00000556102 NBPF14Q5TI25 921 aa26.69■■□□□ 1.86
CDKN3-209ENST00000556102 TMC1Q8TDI8 760 aa26.68■■□□□ 1.86
CDKN3-209ENST00000556102 HDGFL2Q7Z4V5 671 aaPredicted RBP26.67■■□□□ 1.86
CDKN3-209ENST00000556102 CCDC7Q96M83 1385 aa26.67■■□□□ 1.86
CDKN3-209ENST00000556102 BCL9O00512 1426 aa26.66■■□□□ 1.86
CDKN3-209ENST00000556102 NME9Q86XW9 330 aa26.66■■□□□ 1.86
CDKN3-209ENST00000556102 LTN1O94822 1766 aa26.66■■□□□ 1.86
CDKN3-209ENST00000556102 EDC4Q6P2E9 1401 aaKnown RBP26.65■■□□□ 1.86
CDKN3-209ENST00000556102 MARCH10Q8NA82 808 aaPredicted RBP26.65■■□□□ 1.86
CDKN3-209ENST00000556102 PUS7Q96PZ0 661 aaKnown RBP26.65■■□□□ 1.86
CDKN3-209ENST00000556102 SLC12A5Q9H2X9 1139 aa26.65■■□□□ 1.86
CDKN3-209ENST00000556102 PLSCR1O15162 318 aa26.64■■□□□ 1.86
CDKN3-209ENST00000556102 BCL11BQ9C0K0 894 aaPredicted RBP26.64■■□□□ 1.86
CDKN3-209ENST00000556102 TERF2IPQ9NYB0 399 aa26.63■■□□□ 1.85
CDKN3-209ENST00000556102 A0A1W2PP64 1363 aa26.62■■□□□ 1.85
CDKN3-209ENST00000556102 ERBB3P21860 1342 aa26.61■■□□□ 1.85
CDKN3-209ENST00000556102 TNS2Q63HR2 1409 aa26.6■■□□□ 1.85
CDKN3-209ENST00000556102 EXOC5O00471 708 aa26.6■■□□□ 1.85
CDKN3-209ENST00000556102 PTF1AQ7RTS3 328 aa26.59■■□□□ 1.85
CDKN3-209ENST00000556102 NINLQ9Y2I6 1382 aa26.58■■□□□ 1.84
CDKN3-209ENST00000556102 TESK2Q96S53 571 aa26.57■■□□□ 1.84
CDKN3-209ENST00000556102 ST20-MTHFSA0A0A6YYL1 179 aa26.55■■□□□ 1.84
CDKN3-209ENST00000556102 NLRP2Q9NX02 1062 aa26.55■■□□□ 1.84
CDKN3-209ENST00000556102 SLC24A1O60721 1099 aa26.54■■□□□ 1.84
CDKN3-209ENST00000556102 ANKRD24Q8TF21 1146 aa26.53■■□□□ 1.84
CDKN3-209ENST00000556102 ANO8Q9HCE9 1232 aaPredicted RBP26.52■■□□□ 1.84
CDKN3-209ENST00000556102 NHSQ6T4R5 1651 aa26.51■■□□□ 1.83
CDKN3-209ENST00000556102 IL2RBP14784 551 aa26.51■■□□□ 1.83
CDKN3-209ENST00000556102 TRIM26Q12899 539 aaPredicted RBP26.51■■□□□ 1.83
CDKN3-209ENST00000556102 PROM2Q8N271 834 aa26.51■■□□□ 1.83
CDKN3-209ENST00000556102 SPON1Q9HCB6 807 aa26.51■■□□□ 1.83
CDKN3-209ENST00000556102 KCNQ2O43526 872 aa26.5■■□□□ 1.83
CDKN3-209ENST00000556102 CASZ1Q86V15 1759 aa26.49■■□□□ 1.83
CDKN3-209ENST00000556102 FAM208AQ9UK61 1670 aaKnown RBP26.49■■□□□ 1.83
CDKN3-209ENST00000556102 IP6K1Q92551 441 aa26.47■■□□□ 1.83
CDKN3-209ENST00000556102 TXNRD1Q16881 649 aa26.46■■□□□ 1.83
CDKN3-209ENST00000556102 COG3Q96JB2 828 aa26.46■■□□□ 1.83
CDKN3-209ENST00000556102 KAT6BQ8WYB5 2073 aa26.45■■□□□ 1.83
CDKN3-209ENST00000556102 PPP1R1BQ9UD71 204 aaPredicted RBP26.45■■□□□ 1.82
CDKN3-209ENST00000556102 ANKRD36BQ8N2N9 1353 aa26.45■■□□□ 1.82
CDKN3-209ENST00000556102 ACSBG1Q96GR2 724 aa26.43■■□□□ 1.82
CDKN3-209ENST00000556102 USP47Q96K76 1375 aa26.43■■□□□ 1.82
CDKN3-209ENST00000556102 BTAF1O14981 1849 aa26.42■■□□□ 1.82
CDKN3-209ENST00000556102 TMF1P82094 1093 aa26.41■■□□□ 1.82
CDKN3-209ENST00000556102 STK32BQ9NY57 414 aa26.41■■□□□ 1.82
CDKN3-209ENST00000556102 MAP3K19Q56UN5 1328 aa26.4■■□□□ 1.82
CDKN3-209ENST00000556102 LTV1Q96GA3 475 aaPredicted RBP26.4■■□□□ 1.82
CDKN3-209ENST00000556102 HOXC9P31274 260 aa26.38■■□□□ 1.81
CDKN3-209ENST00000556102 SLC15A2Q16348 729 aa26.38■■□□□ 1.81
CDKN3-209ENST00000556102 PDGFDQ9GZP0 370 aaPredicted RBP26.38■■□□□ 1.81
CDKN3-209ENST00000556102 AMPHP49418 695 aa26.37■■□□□ 1.81
CDKN3-209ENST00000556102 RGPD2P0DJD1 1756 aa26.36■■□□□ 1.81
CDKN3-209ENST00000556102 PAPPAQ13219 1627 aa26.36■■□□□ 1.81
CDKN3-209ENST00000556102 RTL1A6NKG5 1358 aa26.35■■□□□ 1.81
CDKN3-209ENST00000556102 FBLN1P23142 703 aa26.35■■□□□ 1.81
CDKN3-209ENST00000556102 ZBTB7AO95365 584 aa26.34■■□□□ 1.81
CDKN3-209ENST00000556102 FYB1O15117 783 aa26.33■■□□□ 1.81
CDKN3-209ENST00000556102 KIF20BQ96Q89 1820 aa26.32■■□□□ 1.8
CDKN3-209ENST00000556102 CDCA8Q53HL2 280 aa26.32■■□□□ 1.8
CDKN3-209ENST00000556102 DDX54Q8TDD1 881 aaKnown RBP26.32■■□□□ 1.8
CDKN3-209ENST00000556102 MYOM1P52179 1685 aa26.31■■□□□ 1.8
CDKN3-209ENST00000556102 GGNBP2Q9H3C7 697 aa26.31■■□□□ 1.8
CDKN3-209ENST00000556102 PTGER2P43116 358 aa26.3■■□□□ 1.8
CDKN3-209ENST00000556102 SHANK3Q9BYB0 1731 aa26.3■■□□□ 1.8
CDKN3-209ENST00000556102 RRS1Q15050 365 aaKnown RBP26.29■■□□□ 1.8
CDKN3-209ENST00000556102 ATF5Q9Y2D1 282 aaPredicted RBP26.29■■□□□ 1.8
CDKN3-209ENST00000556102 DCAF8L1A6NGE4 600 aa26.28■■□□□ 1.8
CDKN3-209ENST00000556102 MEGF6O75095 1541 aa26.28■■□□□ 1.8
CDKN3-209ENST00000556102 DOT1LQ8TEK3 1739 aa26.28■■□□□ 1.8
CDKN3-209ENST00000556102 MTFR1LQ9H019 292 aa26.27■■□□□ 1.8
CDKN3-209ENST00000556102 SMG6Q86US8 1419 aaKnown RBP26.26■■□□□ 1.79
CDKN3-209ENST00000556102 ZCRB1Q8TBF4 217 aaKnown RBP26.26■■□□□ 1.79
CDKN3-209ENST00000556102 TIMELESSQ9UNS1 1208 aa26.26■■□□□ 1.79
CDKN3-209ENST00000556102 LRRC4BQ9NT99 713 aa26.25■■□□□ 1.79
CDKN3-209ENST00000556102 NBPF6Q5VWK0 638 aa26.24■■□□□ 1.79
CDKN3-209ENST00000556102 NBPF4Q96M43 638 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms