RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 XPCQ01831 940 aaPredicted RBP21.1■□□□□ 0.97
PPP4R3A-208ENST00000555462 PLEKHM2Q8IWE5 1019 aa21.1■□□□□ 0.97
PPP4R3A-208ENST00000555462 ANP32BQ92688 251 aaKnown RBP21.1■□□□□ 0.97
PPP4R3A-208ENST00000555462 NSFL1CQ9UNZ2 370 aaKnown RBP21.09■□□□□ 0.97
PPP4R3A-208ENST00000555462 DDIT3P35638 169 aa21.09■□□□□ 0.97
PPP4R3A-208ENST00000555462 CALD1Q05682 793 aaKnown RBP21.09■□□□□ 0.97
PPP4R3A-208ENST00000555462 R3HCC1Q9Y3T6 440 aaKnown RBP21.08■□□□□ 0.97
PPP4R3A-208ENST00000555462 NFE2L2Q16236 605 aa21.08■□□□□ 0.97
PPP4R3A-208ENST00000555462 TXNDC2Q86VQ3 553 aa21.08■□□□□ 0.96
PPP4R3A-208ENST00000555462 MEIS3Q99687 375 aa21.08■□□□□ 0.96
PPP4R3A-208ENST00000555462 TET3O43151 1660 aa21.07■□□□□ 0.96
PPP4R3A-208ENST00000555462 SNX21Q969T3 373 aa21.07■□□□□ 0.96
PPP4R3A-208ENST00000555462 FAM13BQ9NYF5 915 aa21.07■□□□□ 0.96
PPP4R3A-208ENST00000555462 FCHSD2O94868 740 aa21.07■□□□□ 0.96
PPP4R3A-208ENST00000555462 PRIM1P49642 420 aaKnown RBP21.06■□□□□ 0.96
PPP4R3A-208ENST00000555462 ZMYND15Q9H091 742 aa21.06■□□□□ 0.96
PPP4R3A-208ENST00000555462 EXOC6BQ9Y2D4 811 aa21.06■□□□□ 0.96
PPP4R3A-208ENST00000555462 TULP4Q9NRJ4 1543 aa21.06■□□□□ 0.96
PPP4R3A-208ENST00000555462 KIF1BO60333 1816 aa21.06■□□□□ 0.96
PPP4R3A-208ENST00000555462 SBNO2Q9Y2G9 1366 aa21.06■□□□□ 0.96
PPP4R3A-208ENST00000555462 SDSP20132 328 aa21.06■□□□□ 0.96
PPP4R3A-208ENST00000555462 QRICH2Q9H0J4 1663 aa21.05■□□□□ 0.96
PPP4R3A-208ENST00000555462 CT47B1P0C2W7 299 aaPredicted RBP21.05■□□□□ 0.96
PPP4R3A-208ENST00000555462 RBSNQ9H1K0 784 aa21.05■□□□□ 0.96
PPP4R3A-208ENST00000555462 MYOM2P54296 1465 aa21.05■□□□□ 0.96
PPP4R3A-208ENST00000555462 SYCE3A1L190 88 aa21.05■□□□□ 0.96
PPP4R3A-208ENST00000555462 MSNP26038 577 aaKnown RBP21.05■□□□□ 0.96
PPP4R3A-208ENST00000555462 GCC1Q96CN9 775 aa21.05■□□□□ 0.96
PPP4R3A-208ENST00000555462 SULT6B1Q6IMI4 303 aa21.04■□□□□ 0.96
PPP4R3A-208ENST00000555462 MAP4K4O95819 1239 aaPredicted RBP21.04■□□□□ 0.96
PPP4R3A-208ENST00000555462 ABCC11Q96J66 1382 aa21.04■□□□□ 0.96
PPP4R3A-208ENST00000555462 PPRC1Q5VV67 1664 aaKnown RBP21.04■□□□□ 0.96
PPP4R3A-208ENST00000555462 FOXO3O43524 673 aa21.03■□□□□ 0.96
PPP4R3A-208ENST00000555462 ASXL2Q76L83 1435 aa21.03■□□□□ 0.96
PPP4R3A-208ENST00000555462 ALDH1L2Q3SY69 923 aa21.03■□□□□ 0.96
PPP4R3A-208ENST00000555462 RILPL2Q969X0 211 aa21.03■□□□□ 0.96
PPP4R3A-208ENST00000555462 UPF3BQ9BZI7 483 aaKnown RBP21.03■□□□□ 0.96
PPP4R3A-208ENST00000555462 NEK4P51957 841 aa21.02■□□□□ 0.96
PPP4R3A-208ENST00000555462 GNAI1P63096 354 aa21.02■□□□□ 0.96
PPP4R3A-208ENST00000555462 JARID2Q92833 1246 aaPredicted RBP21.02■□□□□ 0.96
PPP4R3A-208ENST00000555462 ZSCAN23Q3MJ62 389 aa21.02■□□□□ 0.96
PPP4R3A-208ENST00000555462 PLCB2Q00722 1185 aa21.02■□□□□ 0.95
PPP4R3A-208ENST00000555462 SLC4A2P04920 1241 aa21■□□□□ 0.95
PPP4R3A-208ENST00000555462 TRIM6-TRIM34B2RNG4 842 aa21■□□□□ 0.95
PPP4R3A-208ENST00000555462 G2E3Q7L622 706 aa21■□□□□ 0.95
PPP4R3A-208ENST00000555462 USP26Q9BXU7 913 aa20.99■□□□□ 0.95
PPP4R3A-208ENST00000555462 TTC22Q5TAA0 569 aa20.99■□□□□ 0.95
PPP4R3A-208ENST00000555462 EFCAB6Q5THR3 1501 aa20.99■□□□□ 0.95
PPP4R3A-208ENST00000555462 SKOR2Q2VWA4 1001 aaPredicted RBP20.99■□□□□ 0.95
PPP4R3A-208ENST00000555462 ADGRB1O14514 1584 aa20.98■□□□□ 0.95
PPP4R3A-208ENST00000555462 GPT2Q8TD30 523 aa20.98■□□□□ 0.95
PPP4R3A-208ENST00000555462 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.98■□□□□ 0.95
PPP4R3A-208ENST00000555462 ZNF830Q96NB3 372 aaPredicted RBP20.98■□□□□ 0.95
PPP4R3A-208ENST00000555462 CIZ1Q9ULV3 898 aaPredicted RBP20.97■□□□□ 0.95
PPP4R3A-208ENST00000555462 SHROOM2Q13796 1616 aa20.97■□□□□ 0.95
PPP4R3A-208ENST00000555462 MROH1Q8NDA8 1641 aa20.97■□□□□ 0.95
PPP4R3A-208ENST00000555462 DDX54Q8TDD1 881 aaKnown RBP20.97■□□□□ 0.95
PPP4R3A-208ENST00000555462 BCL11BQ9C0K0 894 aaPredicted RBP20.97■□□□□ 0.95
PPP4R3A-208ENST00000555462 FAM177BA6PVY3 158 aa20.97■□□□□ 0.95
PPP4R3A-208ENST00000555462 TSC1Q92574 1164 aa20.97■□□□□ 0.95
PPP4R3A-208ENST00000555462 LMBRD1Q9NUN5 540 aa20.97■□□□□ 0.95
PPP4R3A-208ENST00000555462 IL16Q14005 1332 aa20.96■□□□□ 0.95
PPP4R3A-208ENST00000555462 GLIPR1L2Q4G1C9 344 aa20.96■□□□□ 0.95
PPP4R3A-208ENST00000555462 KLHL40Q2TBA0 621 aa20.95■□□□□ 0.94
PPP4R3A-208ENST00000555462 PKNOX2Q96KN3 472 aa20.95■□□□□ 0.94
PPP4R3A-208ENST00000555462 ANO2Q9NQ90 1003 aa20.95■□□□□ 0.94
PPP4R3A-208ENST00000555462 IL13P35225 146 aa20.95■□□□□ 0.94
PPP4R3A-208ENST00000555462 NUTM2GQ5VZR2 741 aa20.95■□□□□ 0.94
PPP4R3A-208ENST00000555462 TMEM63CQ9P1W3 806 aa20.95■□□□□ 0.94
PPP4R3A-208ENST00000555462 ZDHHC9Q9Y397 364 aa20.95■□□□□ 0.94
PPP4R3A-208ENST00000555462 PTMAP06454 111 aaKnown RBP20.95■□□□□ 0.94
PPP4R3A-208ENST00000555462 IL1RAPL2Q9NP60 686 aa20.95■□□□□ 0.94
PPP4R3A-208ENST00000555462 HSP90AB2PQ58FF8 381 aa20.94■□□□□ 0.94
PPP4R3A-208ENST00000555462 COG3Q96JB2 828 aa20.94■□□□□ 0.94
PPP4R3A-208ENST00000555462 API5Q9BZZ5 524 aaKnown RBP20.94■□□□□ 0.94
PPP4R3A-208ENST00000555462 PALD1Q9ULE6 856 aa20.94■□□□□ 0.94
PPP4R3A-208ENST00000555462 INTS3Q68E01 1043 aaKnown RBP20.94■□□□□ 0.94
PPP4R3A-208ENST00000555462 CFAP44Q96MT7 982 aa20.94■□□□□ 0.94
PPP4R3A-208ENST00000555462 RABEP1Q15276 862 aa20.93■□□□□ 0.94
PPP4R3A-208ENST00000555462 ZSCAN30Q86W11 494 aa20.93■□□□□ 0.94
PPP4R3A-208ENST00000555462 RPGRIP1LQ68CZ1 1315 aa20.93■□□□□ 0.94
PPP4R3A-208ENST00000555462 CEP85Q6P2H3 762 aa20.93■□□□□ 0.94
PPP4R3A-208ENST00000555462 DCTPP1Q9H773 170 aa20.93■□□□□ 0.94
PPP4R3A-208ENST00000555462 GLI2P10070 1586 aa20.93■□□□□ 0.94
PPP4R3A-208ENST00000555462 CCDC173Q0VFZ6 552 aa20.93■□□□□ 0.94
PPP4R3A-208ENST00000555462 C17orf53Q8N3J3 647 aaPredicted RBP20.93■□□□□ 0.94
PPP4R3A-208ENST00000555462 IFT57Q9NWB7 429 aa20.93■□□□□ 0.94
PPP4R3A-208ENST00000555462 NCOA3Q9Y6Q9 1424 aa20.92■□□□□ 0.94
PPP4R3A-208ENST00000555462 LTV1Q96GA3 475 aaPredicted RBP20.92■□□□□ 0.94
PPP4R3A-208ENST00000555462 NSD2O96028 1365 aa20.92■□□□□ 0.94
PPP4R3A-208ENST00000555462 ST18O60284 1047 aa20.91■□□□□ 0.94
PPP4R3A-208ENST00000555462 ABCC4O15439 1325 aa20.91■□□□□ 0.94
PPP4R3A-208ENST00000555462 MSH6P52701 1360 aa20.91■□□□□ 0.94
PPP4R3A-208ENST00000555462 ADGRB3O60242 1522 aa20.9■□□□□ 0.94
PPP4R3A-208ENST00000555462 LRRC7Q96NW7 1537 aa20.9■□□□□ 0.94
PPP4R3A-208ENST00000555462 YTHDC2Q9H6S0 1430 aaKnown RBP20.9■□□□□ 0.94
PPP4R3A-208ENST00000555462 NRXN1Q9ULB1 1477 aa20.9■□□□□ 0.94
PPP4R3A-208ENST00000555462 DNTTIP2Q5QJE6 756 aaKnown RBP20.9■□□□□ 0.94
PPP4R3A-208ENST00000555462 CHMP3Q9Y3E7 222 aa20.9■□□□□ 0.94
PPP4R3A-208ENST00000555462 CAMSAP1Q5T5Y3 1602 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms