RNA–Protein interactions for RNA: ENST00000555309.5

HNRNPC-219, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-219ENST00000555309 KCNH5Q8NCM2 988 aa14.01□□□□□ -0.17
HNRNPC-219ENST00000555309 RGPD5Q99666 1765 aa14.01□□□□□ -0.17
HNRNPC-219ENST00000555309 TCP11L2Q8N4U5 519 aa14□□□□□ -0.17
HNRNPC-219ENST00000555309 HSPA5P11021 654 aaKnown RBP13.98□□□□□ -0.17
HNRNPC-219ENST00000555309 BARGINQ6ZT62 677 aa13.98□□□□□ -0.17
HNRNPC-219ENST00000555309 TOM1L2Q6ZVM7 507 aa13.98□□□□□ -0.17
HNRNPC-219ENST00000555309 CARD14Q9BXL6 1004 aa13.98□□□□□ -0.17
HNRNPC-219ENST00000555309 OVOS2A0A0J9YW53 1432 aa13.97□□□□□ -0.17
HNRNPC-219ENST00000555309 BLMP54132 1417 aaPredicted RBP13.97□□□□□ -0.17
HNRNPC-219ENST00000555309 CRB1P82279 1406 aa13.97□□□□□ -0.17
HNRNPC-219ENST00000555309 OVOS2Q6IE36 1432 aa13.97□□□□□ -0.17
HNRNPC-219ENST00000555309 POLR3GLQ9BT43 218 aa13.97□□□□□ -0.17
HNRNPC-219ENST00000555309 ANKRD36BQ8N2N9 1353 aa13.97□□□□□ -0.17
HNRNPC-219ENST00000555309 CSB-PGBD3P0DP91 1061 aa13.96□□□□□ -0.17
HNRNPC-219ENST00000555309 CCDC125Q86Z20 511 aa13.96□□□□□ -0.17
HNRNPC-219ENST00000555309 GGNBP2Q9H3C7 697 aa13.96□□□□□ -0.17
HNRNPC-219ENST00000555309 WDR17Q8IZU2 1322 aa13.96□□□□□ -0.17
HNRNPC-219ENST00000555309 C11orf95C9JLR9 678 aaPredicted RBP13.95□□□□□ -0.18
HNRNPC-219ENST00000555309 FYB1O15117 783 aa13.95□□□□□ -0.18
HNRNPC-219ENST00000555309 SLC24A1O60721 1099 aa13.95□□□□□ -0.18
HNRNPC-219ENST00000555309 TRIM37O94972 964 aa13.95□□□□□ -0.18
HNRNPC-219ENST00000555309 NINLQ9Y2I6 1382 aa13.95□□□□□ -0.18
HNRNPC-219ENST00000555309 USP54Q70EL1 1684 aa13.94□□□□□ -0.18
HNRNPC-219ENST00000555309 PDE3BQ13370 1112 aa13.94□□□□□ -0.18
HNRNPC-219ENST00000555309 EN1Q05925 392 aaPredicted RBP13.93□□□□□ -0.18
HNRNPC-219ENST00000555309 COG3Q96JB2 828 aa13.93□□□□□ -0.18
HNRNPC-219ENST00000555309 THRAP3Q9Y2W1 955 aaKnown RBP13.93□□□□□ -0.18
HNRNPC-219ENST00000555309 MYOM1P52179 1685 aa13.93□□□□□ -0.18
HNRNPC-219ENST00000555309 LTN1O94822 1766 aa13.93□□□□□ -0.18
HNRNPC-219ENST00000555309 EIF4G2P78344 907 aaKnown RBP eCLIP13.93□□□□□ -0.18
HNRNPC-219ENST00000555309 RRS1Q15050 365 aaKnown RBP13.93□□□□□ -0.18
HNRNPC-219ENST00000555309 PTF1AQ7RTS3 328 aa13.93□□□□□ -0.18
HNRNPC-219ENST00000555309 LTV1Q96GA3 475 aaPredicted RBP13.93□□□□□ -0.18
HNRNPC-219ENST00000555309 ERBB3P21860 1342 aa13.92□□□□□ -0.18
HNRNPC-219ENST00000555309 MAP3K19Q56UN5 1328 aa13.92□□□□□ -0.18
HNRNPC-219ENST00000555309 SF3B2Q13435 895 aaKnown RBP13.92□□□□□ -0.18
HNRNPC-219ENST00000555309 ANKRD24Q8TF21 1146 aa13.92□□□□□ -0.18
HNRNPC-219ENST00000555309 CARD10Q9BWT7 1032 aa13.92□□□□□ -0.18
HNRNPC-219ENST00000555309 NLRP2Q9NX02 1062 aa13.92□□□□□ -0.18
HNRNPC-219ENST00000555309 CDCA8Q53HL2 280 aa13.91□□□□□ -0.18
HNRNPC-219ENST00000555309 FAM196AQ6ZSG2 479 aa13.91□□□□□ -0.18
HNRNPC-219ENST00000555309 MARCH10Q8NA82 808 aaPredicted RBP13.9□□□□□ -0.18
HNRNPC-219ENST00000555309 IP6K1Q92551 441 aa13.9□□□□□ -0.18
HNRNPC-219ENST00000555309 PARP4Q9UKK3 1724 aaKnown RBP13.9□□□□□ -0.18
HNRNPC-219ENST00000555309 EZH2Q15910 746 aaKnown RBP13.9□□□□□ -0.18
HNRNPC-219ENST00000555309 DDB1Q16531 1140 aa13.9□□□□□ -0.18
HNRNPC-219ENST00000555309 NSD3Q9BZ95 1437 aa13.89□□□□□ -0.19
HNRNPC-219ENST00000555309 LRRC37A3O60309 1634 aa13.89□□□□□ -0.19
HNRNPC-219ENST00000555309 HOXC9P31274 260 aa13.89□□□□□ -0.19
HNRNPC-219ENST00000555309 DISP2A7MBM2 1401 aa13.89□□□□□ -0.19
HNRNPC-219ENST00000555309 APBA3O96018 575 aa13.88□□□□□ -0.19
HNRNPC-219ENST00000555309 TNS1Q9HBL0 1735 aaKnown RBP13.88□□□□□ -0.19
HNRNPC-219ENST00000555309 BAG6P46379 1132 aa13.87□□□□□ -0.19
HNRNPC-219ENST00000555309 AMPHP49418 695 aa13.87□□□□□ -0.19
HNRNPC-219ENST00000555309 CAMKK2Q96RR4 588 aa13.87□□□□□ -0.19
HNRNPC-219ENST00000555309 WNK3Q9BYP7 1800 aa13.86□□□□□ -0.19
HNRNPC-219ENST00000555309 PEAK1Q9H792 1746 aa13.86□□□□□ -0.19
HNRNPC-219ENST00000555309 PSDA5PKW4 1024 aaPredicted RBP13.86□□□□□ -0.19
HNRNPC-219ENST00000555309 ABCC6O95255 1503 aa13.85□□□□□ -0.19
HNRNPC-219ENST00000555309 RGPD1P0DJD0 1748 aa13.85□□□□□ -0.19
HNRNPC-219ENST00000555309 EXOC5O00471 708 aa13.85□□□□□ -0.19
HNRNPC-219ENST00000555309 HSP90AB2PQ58FF8 381 aa13.85□□□□□ -0.19
HNRNPC-219ENST00000555309 PANK3Q9H999 370 aa13.85□□□□□ -0.19
HNRNPC-219ENST00000555309 EMILIN1Q9Y6C2 1016 aa13.85□□□□□ -0.19
HNRNPC-219ENST00000555309 CCDC7Q96M83 1385 aa13.84□□□□□ -0.19
HNRNPC-219ENST00000555309 USHBP1Q8N6Y0 703 aa13.84□□□□□ -0.19
HNRNPC-219ENST00000555309 RGPD2P0DJD1 1756 aa13.84□□□□□ -0.19
HNRNPC-219ENST00000555309 KIF20BQ96Q89 1820 aa13.84□□□□□ -0.19
HNRNPC-219ENST00000555309 KCNQ2O43526 872 aa13.84□□□□□ -0.19
HNRNPC-219ENST00000555309 NBPF6Q5VWK0 638 aa13.84□□□□□ -0.19
HNRNPC-219ENST00000555309 NBPF4Q96M43 638 aa13.84□□□□□ -0.19
HNRNPC-219ENST00000555309 IL2RBP14784 551 aa13.83□□□□□ -0.2
HNRNPC-219ENST00000555309 TNNT2P45379 298 aaPredicted RBP13.83□□□□□ -0.2
HNRNPC-219ENST00000555309 CDCA7Q9BWT1 371 aaPredicted RBP13.83□□□□□ -0.2
HNRNPC-219ENST00000555309 OVOS2A0A0G2JMS6 1433 aa13.83□□□□□ -0.2
HNRNPC-219ENST00000555309 ACSBG1Q96GR2 724 aa13.82□□□□□ -0.2
HNRNPC-219ENST00000555309 PPM1GO15355 546 aaPredicted RBP13.81□□□□□ -0.2
HNRNPC-219ENST00000555309 MIER1Q8N108 512 aa13.81□□□□□ -0.2
HNRNPC-219ENST00000555309 SBF2Q86WG5 1849 aa13.81□□□□□ -0.2
HNRNPC-219ENST00000555309 R3HDM1Q15032 1099 aaKnown RBP13.81□□□□□ -0.2
HNRNPC-219ENST00000555309 KIF7Q2M1P5 1343 aa13.81□□□□□ -0.2
HNRNPC-219ENST00000555309 TNS2Q63HR2 1409 aa13.8□□□□□ -0.2
HNRNPC-219ENST00000555309 DDX54Q8TDD1 881 aaKnown RBP13.8□□□□□ -0.2
HNRNPC-219ENST00000555309 CGNL1Q0VF96 1302 aa13.8□□□□□ -0.2
HNRNPC-219ENST00000555309 PROM2Q8N271 834 aa13.79□□□□□ -0.2
HNRNPC-219ENST00000555309 FAM208AQ9UK61 1670 aaKnown RBP13.79□□□□□ -0.2
HNRNPC-219ENST00000555309 BCL11BQ9C0K0 894 aaPredicted RBP13.78□□□□□ -0.2
HNRNPC-219ENST00000555309 POLKQ9UBT6 870 aa13.78□□□□□ -0.2
HNRNPC-219ENST00000555309 MEGF6O75095 1541 aa13.78□□□□□ -0.2
HNRNPC-219ENST00000555309 RTL1A6NKG5 1358 aa13.78□□□□□ -0.2
HNRNPC-219ENST00000555309 INSRP06213 1382 aa13.77□□□□□ -0.21
HNRNPC-219ENST00000555309 FLT4P35916 1363 aa13.76□□□□□ -0.21
HNRNPC-219ENST00000555309 MAP2P11137 1827 aaKnown RBP13.76□□□□□ -0.21
HNRNPC-219ENST00000555309 BCL9O00512 1426 aa13.76□□□□□ -0.21
HNRNPC-219ENST00000555309 KAT6BQ8WYB5 2073 aa13.75□□□□□ -0.21
HNRNPC-219ENST00000555309 RREB1Q92766 1687 aa13.74□□□□□ -0.21
HNRNPC-219ENST00000555309 PLSCR1O15162 318 aa13.74□□□□□ -0.21
HNRNPC-219ENST00000555309 ZCRB1Q8TBF4 217 aaKnown RBP13.74□□□□□ -0.21
HNRNPC-219ENST00000555309 ANO8Q9HCE9 1232 aaPredicted RBP13.74□□□□□ -0.21
HNRNPC-219ENST00000555309 NUP188Q5SRE5 1749 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms