RNA–Protein interactions for RNA: ENST00000554945.1

SRP54-AS1-201, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 3

Gene SRP54-AS1, Length 600 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-201ENST00000554945 NLRP6P59044 892 aa13.53□□□□□ -0.24
SRP54-AS1-201ENST00000554945 SP7Q8TDD2 431 aaPredicted RBP13.53□□□□□ -0.24
SRP54-AS1-201ENST00000554945 USP6P35125 1406 aa13.53□□□□□ -0.24
SRP54-AS1-201ENST00000554945 COL5A2P05997 1499 aaPredicted RBP13.53□□□□□ -0.24
SRP54-AS1-201ENST00000554945 CRB1P82279 1406 aa13.52□□□□□ -0.25
SRP54-AS1-201ENST00000554945 AATKQ6ZMQ8 1374 aa13.51□□□□□ -0.25
SRP54-AS1-201ENST00000554945 EVC2Q86UK5 1308 aa13.51□□□□□ -0.25
SRP54-AS1-201ENST00000554945 MYCNP04198 464 aaPredicted RBP13.51□□□□□ -0.25
SRP54-AS1-201ENST00000554945 NBPF14Q5TI25 921 aa13.51□□□□□ -0.25
SRP54-AS1-201ENST00000554945 L3MBTL2Q969R5 705 aa13.51□□□□□ -0.25
SRP54-AS1-201ENST00000554945 NUP188Q5SRE5 1749 aa13.5□□□□□ -0.25
SRP54-AS1-201ENST00000554945 SLIT3O75094 1523 aa13.5□□□□□ -0.25
SRP54-AS1-201ENST00000554945 ZBTB7CA1YPR0 619 aa13.5□□□□□ -0.25
SRP54-AS1-201ENST00000554945 ZNF692Q9BU19 519 aaPredicted RBP13.5□□□□□ -0.25
SRP54-AS1-201ENST00000554945 TRPM1Q7Z4N2 1603 aa13.5□□□□□ -0.25
SRP54-AS1-201ENST00000554945 SBF2Q86WG5 1849 aa13.48□□□□□ -0.25
SRP54-AS1-201ENST00000554945 COL18A1P39060 1754 aa13.48□□□□□ -0.25
SRP54-AS1-201ENST00000554945 PIK3C2AO00443 1686 aa13.48□□□□□ -0.25
SRP54-AS1-201ENST00000554945 OVOS2A0A0G2JMS6 1433 aa13.47□□□□□ -0.25
SRP54-AS1-201ENST00000554945 OVOS2A0A0J9YW53 1432 aa13.47□□□□□ -0.25
SRP54-AS1-201ENST00000554945 OVOS2Q6IE36 1432 aa13.47□□□□□ -0.25
SRP54-AS1-201ENST00000554945 PEAK1Q9H792 1746 aa13.47□□□□□ -0.25
SRP54-AS1-201ENST00000554945 DDB1Q16531 1140 aa13.47□□□□□ -0.25
SRP54-AS1-201ENST00000554945 TOM1L2Q6ZVM7 507 aa13.47□□□□□ -0.25
SRP54-AS1-201ENST00000554945 KCNH5Q8NCM2 988 aa13.47□□□□□ -0.25
SRP54-AS1-201ENST00000554945 AKAP12Q02952 1782 aa13.47□□□□□ -0.25
SRP54-AS1-201ENST00000554945 RGPD3A6NKT7 1758 aaPredicted RBP13.46□□□□□ -0.25
SRP54-AS1-201ENST00000554945 RGPD4Q7Z3J3 1758 aa13.46□□□□□ -0.25
SRP54-AS1-201ENST00000554945 PLSCR1O15162 318 aa13.46□□□□□ -0.25
SRP54-AS1-201ENST00000554945 CDCA7Q9BWT1 371 aaPredicted RBP13.46□□□□□ -0.25
SRP54-AS1-201ENST00000554945 LRRC37A3O60309 1634 aa13.46□□□□□ -0.26
SRP54-AS1-201ENST00000554945 WNK3Q9BYP7 1800 aa13.46□□□□□ -0.26
SRP54-AS1-201ENST00000554945 ROCK2O75116 1388 aaKnown RBP13.45□□□□□ -0.26
SRP54-AS1-201ENST00000554945 RGPD5Q99666 1765 aa13.45□□□□□ -0.26
SRP54-AS1-201ENST00000554945 TTC21BQ7Z4L5 1316 aa13.45□□□□□ -0.26
SRP54-AS1-201ENST00000554945 WDR17Q8IZU2 1322 aa13.45□□□□□ -0.26
SRP54-AS1-201ENST00000554945 TTC21AQ8NDW8 1320 aa13.45□□□□□ -0.26
SRP54-AS1-201ENST00000554945 ARHGEF25Q86VW2 580 aa13.45□□□□□ -0.26
SRP54-AS1-201ENST00000554945 AXIN2Q9Y2T1 843 aa13.45□□□□□ -0.26
SRP54-AS1-201ENST00000554945 SIN3AQ96ST3 1273 aa13.44□□□□□ -0.26
SRP54-AS1-201ENST00000554945 CPSF1Q10570 1443 aaKnown RBP13.44□□□□□ -0.26
SRP54-AS1-201ENST00000554945 NEUROD1Q13562 356 aa13.43□□□□□ -0.26
SRP54-AS1-201ENST00000554945 AKT1S1Q96B36 256 aa13.43□□□□□ -0.26
SRP54-AS1-201ENST00000554945 BCL11BQ9C0K0 894 aaPredicted RBP13.43□□□□□ -0.26
SRP54-AS1-201ENST00000554945 SPON1Q9HCB6 807 aa13.43□□□□□ -0.26
SRP54-AS1-201ENST00000554945 KCNQ2O43526 872 aa13.42□□□□□ -0.26
SRP54-AS1-201ENST00000554945 CARD10Q9BWT7 1032 aa13.42□□□□□ -0.26
SRP54-AS1-201ENST00000554945 BCL9O00512 1426 aa13.41□□□□□ -0.26
SRP54-AS1-201ENST00000554945 CSB-PGBD3P0DP91 1061 aa13.41□□□□□ -0.26
SRP54-AS1-201ENST00000554945 MARCH10Q8NA82 808 aaPredicted RBP13.41□□□□□ -0.26
SRP54-AS1-201ENST00000554945 KTN1Q86UP2 1357 aaKnown RBP13.41□□□□□ -0.26
SRP54-AS1-201ENST00000554945 MON2Q7Z3U7 1717 aa13.4□□□□□ -0.26
SRP54-AS1-201ENST00000554945 EXOC5O00471 708 aa13.4□□□□□ -0.26
SRP54-AS1-201ENST00000554945 SOX12O15370 315 aa13.4□□□□□ -0.26
SRP54-AS1-201ENST00000554945 PPP1R1BQ9UD71 204 aaPredicted RBP13.4□□□□□ -0.26
SRP54-AS1-201ENST00000554945 NFAT5O94916 1531 aa13.39□□□□□ -0.27
SRP54-AS1-201ENST00000554945 ABCC6O95255 1503 aa13.39□□□□□ -0.27
SRP54-AS1-201ENST00000554945 CCDC7Q96M83 1385 aa13.39□□□□□ -0.27
SRP54-AS1-201ENST00000554945 SBNO2Q9Y2G9 1366 aa13.38□□□□□ -0.27
SRP54-AS1-201ENST00000554945 USP54Q70EL1 1684 aa13.37□□□□□ -0.27
SRP54-AS1-201ENST00000554945 PTF1AQ7RTS3 328 aa13.37□□□□□ -0.27
SRP54-AS1-201ENST00000554945 PROM2Q8N271 834 aa13.37□□□□□ -0.27
SRP54-AS1-201ENST00000554945 USP31Q70CQ4 1352 aa13.36□□□□□ -0.27
SRP54-AS1-201ENST00000554945 NINLQ9Y2I6 1382 aa13.36□□□□□ -0.27
SRP54-AS1-201ENST00000554945 CASZ1Q86V15 1759 aa13.36□□□□□ -0.27
SRP54-AS1-201ENST00000554945 ANO8Q9HCE9 1232 aaPredicted RBP13.36□□□□□ -0.27
SRP54-AS1-201ENST00000554945 LTN1O94822 1766 aa13.35□□□□□ -0.27
SRP54-AS1-201ENST00000554945 HDGFL2Q7Z4V5 671 aaPredicted RBP13.35□□□□□ -0.27
SRP54-AS1-201ENST00000554945 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.35□□□□□ -0.27
SRP54-AS1-201ENST00000554945 CARD11Q9BXL7 1154 aa13.35□□□□□ -0.27
SRP54-AS1-201ENST00000554945 TNS2Q63HR2 1409 aa13.34□□□□□ -0.27
SRP54-AS1-201ENST00000554945 YY1P25490 414 aa13.34□□□□□ -0.27
SRP54-AS1-201ENST00000554945 TXNRD1Q16881 649 aa13.34□□□□□ -0.27
SRP54-AS1-201ENST00000554945 PIP4P2Q8N4L2 257 aa13.34□□□□□ -0.27
SRP54-AS1-201ENST00000554945 NME9Q86XW9 330 aa13.33□□□□□ -0.28
SRP54-AS1-201ENST00000554945 TMC1Q8TDI8 760 aa13.33□□□□□ -0.28
SRP54-AS1-201ENST00000554945 NLRP2Q9NX02 1062 aa13.33□□□□□ -0.28
SRP54-AS1-201ENST00000554945 STK32BQ9NY57 414 aa13.33□□□□□ -0.28
SRP54-AS1-201ENST00000554945 CD163L1Q9NR16 1453 aa13.33□□□□□ -0.28
SRP54-AS1-201ENST00000554945 ERBB3P21860 1342 aa13.33□□□□□ -0.28
SRP54-AS1-201ENST00000554945 NHSQ6T4R5 1651 aa13.32□□□□□ -0.28
SRP54-AS1-201ENST00000554945 SLC15A2Q16348 729 aa13.32□□□□□ -0.28
SRP54-AS1-201ENST00000554945 REM2Q8IYK8 340 aaPredicted RBP13.32□□□□□ -0.28
SRP54-AS1-201ENST00000554945 PUS7Q96PZ0 661 aaKnown RBP13.32□□□□□ -0.28
SRP54-AS1-201ENST00000554945 TERF2IPQ9NYB0 399 aa13.32□□□□□ -0.28
SRP54-AS1-201ENST00000554945 EDC4Q6P2E9 1401 aaKnown RBP13.31□□□□□ -0.28
SRP54-AS1-201ENST00000554945 IL2RBP14784 551 aa13.31□□□□□ -0.28
SRP54-AS1-201ENST00000554945 PDGFDQ9GZP0 370 aaPredicted RBP13.31□□□□□ -0.28
SRP54-AS1-201ENST00000554945 SLC12A5Q9H2X9 1139 aa13.31□□□□□ -0.28
SRP54-AS1-201ENST00000554945 KAT6BQ8WYB5 2073 aa13.3□□□□□ -0.28
SRP54-AS1-201ENST00000554945 ZBTB7AO95365 584 aa13.3□□□□□ -0.28
SRP54-AS1-201ENST00000554945 ANKRD24Q8TF21 1146 aa13.3□□□□□ -0.28
SRP54-AS1-201ENST00000554945 PTGER2P43116 358 aa13.29□□□□□ -0.28
SRP54-AS1-201ENST00000554945 ACSBG1Q96GR2 724 aa13.29□□□□□ -0.28
SRP54-AS1-201ENST00000554945 ATF5Q9Y2D1 282 aaPredicted RBP13.29□□□□□ -0.28
SRP54-AS1-201ENST00000554945 TONSLQ96HA7 1378 aa13.29□□□□□ -0.28
SRP54-AS1-201ENST00000554945 BTAF1O14981 1849 aa13.28□□□□□ -0.28
SRP54-AS1-201ENST00000554945 SLC24A1O60721 1099 aa13.28□□□□□ -0.28
SRP54-AS1-201ENST00000554945 MTFR1LQ9H019 292 aa13.28□□□□□ -0.28
SRP54-AS1-201ENST00000554945 ZBTB12Q9Y330 459 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms