RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 YTHDC2Q9H6S0 1430 aaKnown RBP3.35□□□□□ -1.87
PRPF39-205ENST00000554081 EIF2S2P20042 333 aaKnown RBP3.35□□□□□ -1.87
PRPF39-205ENST00000554081 YY1P25490 414 aa3.35□□□□□ -1.87
PRPF39-205ENST00000554081 SULT6B1Q6IMI4 303 aa3.35□□□□□ -1.87
PRPF39-205ENST00000554081 FAM9BQ8IZU0 186 aa3.35□□□□□ -1.87
PRPF39-205ENST00000554081 AK7Q96M32 723 aa3.35□□□□□ -1.87
PRPF39-205ENST00000554081 C3P01024 1663 aa3.35□□□□□ -1.87
PRPF39-205ENST00000554081 POLD1P28340 1107 aa3.35□□□□□ -1.87
PRPF39-205ENST00000554081 TEFQ10587 303 aa3.35□□□□□ -1.87
PRPF39-205ENST00000554081 ZNF530Q6P9A1 599 aaPredicted RBP3.35□□□□□ -1.87
PRPF39-205ENST00000554081 RTF1Q92541 710 aaKnown RBP3.35□□□□□ -1.87
PRPF39-205ENST00000554081 TTC21BQ7Z4L5 1316 aa3.35□□□□□ -1.87
PRPF39-205ENST00000554081 RNF17Q9BXT8 1623 aaKnown RBP3.35□□□□□ -1.87
PRPF39-205ENST00000554081 ADAMTSL3P82987 1691 aa3.35□□□□□ -1.87
PRPF39-205ENST00000554081 PTPRUQ92729 1446 aa3.35□□□□□ -1.87
PRPF39-205ENST00000554081 CABP4P57796 275 aa3.34□□□□□ -1.87
PRPF39-205ENST00000554081 SLC39A6Q13433 755 aa3.34□□□□□ -1.87
PRPF39-205ENST00000554081 KCNH5Q8NCM2 988 aa3.34□□□□□ -1.87
PRPF39-205ENST00000554081 SPON1Q9HCB6 807 aa3.34□□□□□ -1.87
PRPF39-205ENST00000554081 CCNL1Q9UK58 526 aaPredicted RBP3.34□□□□□ -1.87
PRPF39-205ENST00000554081 BCS1LQ9Y276 419 aa3.34□□□□□ -1.87
PRPF39-205ENST00000554081 ROCK1Q13464 1354 aa3.34□□□□□ -1.87
PRPF39-205ENST00000554081 HFM1A2PYH4 1435 aa3.34□□□□□ -1.87
PRPF39-205ENST00000554081 AGLP35573 1532 aa3.34□□□□□ -1.87
PRPF39-205ENST00000554081 IL2RBP14784 551 aa3.34□□□□□ -1.87
PRPF39-205ENST00000554081 MTHFSP49914 203 aa3.34□□□□□ -1.87
PRPF39-205ENST00000554081 AIMP1Q12904 312 aaKnown RBP3.34□□□□□ -1.87
PRPF39-205ENST00000554081 CCDC146Q8IYE0 955 aa3.34□□□□□ -1.87
PRPF39-205ENST00000554081 TTC5Q8N0Z6 440 aa3.34□□□□□ -1.87
PRPF39-205ENST00000554081 ZCRB1Q8TBF4 217 aaKnown RBP3.34□□□□□ -1.87
PRPF39-205ENST00000554081 MIS18AQ9NYP9 233 aa3.34□□□□□ -1.87
PRPF39-205ENST00000554081 CEP152O94986 1710 aa3.34□□□□□ -1.87
PRPF39-205ENST00000554081 C1orf167Q5SNV9 1468 aa3.34□□□□□ -1.87
PRPF39-205ENST00000554081 KDM5CP41229 1560 aa3.34□□□□□ -1.88
PRPF39-205ENST00000554081 DNMT1P26358 1616 aaKnown RBP3.34□□□□□ -1.88
PRPF39-205ENST00000554081 LRRIQ1Q96JM4 1722 aa3.34□□□□□ -1.88
PRPF39-205ENST00000554081 POTEFA5A3E0 1075 aa3.34□□□□□ -1.88
PRPF39-205ENST00000554081 GNPATO15228 680 aa3.34□□□□□ -1.88
PRPF39-205ENST00000554081 ECM2O94769 699 aaPredicted RBP3.34□□□□□ -1.88
PRPF39-205ENST00000554081 ATP6V1AP38606 617 aa3.34□□□□□ -1.88
PRPF39-205ENST00000554081 TMOD3Q9NYL9 352 aa3.34□□□□□ -1.88
PRPF39-205ENST00000554081 EIF3AQ14152 1382 aaKnown RBP3.34□□□□□ -1.88
PRPF39-205ENST00000554081 PPIP5K1Q6PFW1 1433 aa3.34□□□□□ -1.88
PRPF39-205ENST00000554081 SIGLEC1Q9BZZ2 1709 aa3.33□□□□□ -1.88
PRPF39-205ENST00000554081 ZNF622Q969S3 477 aaKnown RBP eCLIP3.33□□□□□ -1.881e-6■□□□□ 11.2
PRPF39-205ENST00000554081 ATAD2Q6PL18 1390 aa3.33□□□□□ -1.88
PRPF39-205ENST00000554081 ZMYM4Q5VZL5 1548 aa3.33□□□□□ -1.88
PRPF39-205ENST00000554081 DCTN1Q14203 1278 aa3.33□□□□□ -1.88
PRPF39-205ENST00000554081 WDR43Q15061 677 aaKnown RBP eCLIP3.33□□□□□ -1.889e-15■□□□□ 10.1
PRPF39-205ENST00000554081 TXNRD1Q16881 649 aa3.33□□□□□ -1.88
PRPF39-205ENST00000554081 CFAP53Q96M91 514 aa3.33□□□□□ -1.88
PRPF39-205ENST00000554081 CCDC85AQ96PX6 553 aaPredicted RBP3.33□□□□□ -1.88
PRPF39-205ENST00000554081 PNPLA6Q8IY17 1366 aa3.33□□□□□ -1.88
PRPF39-205ENST00000554081 FAM135BQ49AJ0 1406 aa3.33□□□□□ -1.88
PRPF39-205ENST00000554081 ADAMTS13Q76LX8 1427 aa3.33□□□□□ -1.88
PRPF39-205ENST00000554081 PCNTO95613 3336 aa3.33□□□□□ -1.88
PRPF39-205ENST00000554081 SOS2Q07890 1332 aaPredicted RBP3.32□□□□□ -1.88
PRPF39-205ENST00000554081 MAPK8IP3Q9UPT6 1336 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 RFC4P35249 363 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 ARHGAP27Q6ZUM4 889 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 FBXW7Q969H0 707 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 NUDCQ9Y266 331 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 PIK3C2BO00750 1634 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 TCOF1Q13428 1488 aaKnown RBP3.32□□□□□ -1.88
PRPF39-205ENST00000554081 ARHGEF10O15013 1369 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 USP47Q96K76 1375 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 CEP350Q5VT06 3117 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 CGNL1Q0VF96 1302 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 G3V3G9 751 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 VPS72Q15906 364 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 DCAF8Q5TAQ9 597 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 NBPF6Q5VWK0 638 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 AEBP1Q8IUX7 1158 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 NBPF4Q96M43 638 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 PLA2R1Q13018 1463 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 MAP3K19Q56UN5 1328 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 MYL6BP14649 208 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 NFATC2IPQ8NCF5 419 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 THUMPD2Q9BTF0 503 aaKnown RBP3.32□□□□□ -1.88
PRPF39-205ENST00000554081 TBC1D2BQ9UPU7 963 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 PREX1Q8TCU6 1659 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 SPATA31D1Q6ZQQ2 1576 aa3.32□□□□□ -1.88
PRPF39-205ENST00000554081 ABCC11Q96J66 1382 aa3.31□□□□□ -1.88
PRPF39-205ENST00000554081 ZPR1O75312 459 aa3.31□□□□□ -1.88
PRPF39-205ENST00000554081 MARCH10Q8NA82 808 aaPredicted RBP3.31□□□□□ -1.88
PRPF39-205ENST00000554081 SPG7Q9UQ90 795 aa3.31□□□□□ -1.88
PRPF39-205ENST00000554081 CHMP3Q9Y3E7 222 aa3.31□□□□□ -1.88
PRPF39-205ENST00000554081 FYB1O15117 783 aa3.31□□□□□ -1.88
PRPF39-205ENST00000554081 HRCP23327 699 aa3.31□□□□□ -1.88
PRPF39-205ENST00000554081 IER5LQ5T953 404 aa3.31□□□□□ -1.88
PRPF39-205ENST00000554081 C16orf71Q8IYS4 520 aaPredicted RBP3.31□□□□□ -1.88
PRPF39-205ENST00000554081 FNBP4Q8N3X1 1017 aaPredicted RBP3.31□□□□□ -1.88
PRPF39-205ENST00000554081 PHF12Q96QT6 1004 aa3.31□□□□□ -1.88
PRPF39-205ENST00000554081 FHDC1Q9C0D6 1143 aaPredicted RBP3.31□□□□□ -1.88
PRPF39-205ENST00000554081 ASAP1Q9ULH1 1129 aa3.31□□□□□ -1.88
PRPF39-205ENST00000554081 CPS1P31327 1500 aa3.31□□□□□ -1.88
PRPF39-205ENST00000554081 FCHSD2O94868 740 aa3.31□□□□□ -1.88
PRPF39-205ENST00000554081 ANXA1P04083 346 aa3.31□□□□□ -1.88
PRPF39-205ENST00000554081 GPTP24298 496 aa3.31□□□□□ -1.88
PRPF39-205ENST00000554081 TMX4Q9H1E5 349 aaPredicted RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms