RNA–Protein interactions for RNA: ENST00000553444.1

HNRNPC-206, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-206ENST00000553444 SLIT3O75094 1523 aa17.02■□□□□ 0.32
HNRNPC-206ENST00000553444 CDCA7Q9BWT1 371 aaPredicted RBP17.02■□□□□ 0.32
HNRNPC-206ENST00000553444 CABP1Q9NZU7 370 aa17.02■□□□□ 0.32
HNRNPC-206ENST00000553444 AXIN2Q9Y2T1 843 aa17.02■□□□□ 0.32
HNRNPC-206ENST00000553444 ZNF784Q8NCA9 323 aaPredicted RBP17.01■□□□□ 0.31
HNRNPC-206ENST00000553444 LRRC37A3O60309 1634 aa17■□□□□ 0.31
HNRNPC-206ENST00000553444 TXNRD1Q16881 649 aa17■□□□□ 0.31
HNRNPC-206ENST00000553444 STK32BQ9NY57 414 aa16.99■□□□□ 0.31
HNRNPC-206ENST00000553444 ATF5Q9Y2D1 282 aaPredicted RBP16.99■□□□□ 0.31
HNRNPC-206ENST00000553444 RGPD3A6NKT7 1758 aaPredicted RBP16.99■□□□□ 0.31
HNRNPC-206ENST00000553444 RGPD4Q7Z3J3 1758 aa16.99■□□□□ 0.31
HNRNPC-206ENST00000553444 CASZ1Q86V15 1759 aa16.99■□□□□ 0.31
HNRNPC-206ENST00000553444 CPSF1Q10570 1443 aaKnown RBP16.98■□□□□ 0.31
HNRNPC-206ENST00000553444 SLC15A2Q16348 729 aa16.98■□□□□ 0.31
HNRNPC-206ENST00000553444 ARHGEF25Q86VW2 580 aa16.98■□□□□ 0.31
HNRNPC-206ENST00000553444 CARD10Q9BWT7 1032 aa16.98■□□□□ 0.31
HNRNPC-206ENST00000553444 UTRNP46939 3433 aa16.98■□□□□ 0.31
HNRNPC-206ENST00000553444 SGIP1Q9BQI5 828 aa16.97■□□□□ 0.31
HNRNPC-206ENST00000553444 SYT17Q9BSW7 474 aa16.97■□□□□ 0.31
HNRNPC-206ENST00000553444 FHDC1Q9C0D6 1143 aaPredicted RBP16.97■□□□□ 0.31
HNRNPC-206ENST00000553444 MTFR1LQ9H019 292 aa16.96■□□□□ 0.31
HNRNPC-206ENST00000553444 CSB-PGBD3P0DP91 1061 aa16.95■□□□□ 0.3
HNRNPC-206ENST00000553444 EXOC5O00471 708 aa16.94■□□□□ 0.3
HNRNPC-206ENST00000553444 KCNH5Q8NCM2 988 aa16.94■□□□□ 0.3
HNRNPC-206ENST00000553444 TTC21BQ7Z4L5 1316 aa16.94■□□□□ 0.3
HNRNPC-206ENST00000553444 KIAA1210Q9ULL0 1709 aa16.93■□□□□ 0.3
HNRNPC-206ENST00000553444 MYOM1P52179 1685 aa16.92■□□□□ 0.3
HNRNPC-206ENST00000553444 SOX12O15370 315 aa16.92■□□□□ 0.3
HNRNPC-206ENST00000553444 COL18A1P39060 1754 aa16.92■□□□□ 0.3
HNRNPC-206ENST00000553444 CCDC7Q96M83 1385 aa16.91■□□□□ 0.3
HNRNPC-206ENST00000553444 TNS2Q63HR2 1409 aa16.91■□□□□ 0.3
HNRNPC-206ENST00000553444 EVC2Q86UK5 1308 aa16.91■□□□□ 0.3
HNRNPC-206ENST00000553444 ARXQ96QS3 562 aa16.9■□□□□ 0.3
HNRNPC-206ENST00000553444 ZNF692Q9BU19 519 aaPredicted RBP16.9■□□□□ 0.3
HNRNPC-206ENST00000553444 MAP3K5Q99683 1374 aa16.89■□□□□ 0.3
HNRNPC-206ENST00000553444 PIK3C2AO00443 1686 aa16.89■□□□□ 0.29
HNRNPC-206ENST00000553444 TTC21AQ8NDW8 1320 aa16.89■□□□□ 0.29
HNRNPC-206ENST00000553444 SBF2Q86WG5 1849 aa16.89■□□□□ 0.29
HNRNPC-206ENST00000553444 SENP3-EIF4A1A0A087X0R7 540 aa16.88■□□□□ 0.29
HNRNPC-206ENST00000553444 C1QTNF8P60827 252 aa16.88■□□□□ 0.29
HNRNPC-206ENST00000553444 NFAT5O94916 1531 aa16.87■□□□□ 0.29
HNRNPC-206ENST00000553444 ACSBG1Q96GR2 724 aa16.87■□□□□ 0.29
HNRNPC-206ENST00000553444 ZNF827Q17R98 1081 aa16.86■□□□□ 0.29
HNRNPC-206ENST00000553444 ERBB3P21860 1342 aa16.85■□□□□ 0.29
HNRNPC-206ENST00000553444 TRPM1Q7Z4N2 1603 aa16.85■□□□□ 0.29
HNRNPC-206ENST00000553444 ABCC6O95255 1503 aa16.84■□□□□ 0.29
HNRNPC-206ENST00000553444 WNK3Q9BYP7 1800 aa16.84■□□□□ 0.29
HNRNPC-206ENST00000553444 QRICH2Q9H0J4 1663 aa16.83■□□□□ 0.28
HNRNPC-206ENST00000553444 LRRC4BQ9NT99 713 aa16.83■□□□□ 0.28
HNRNPC-206ENST00000553444 PAPPAQ13219 1627 aa16.82■□□□□ 0.28
HNRNPC-206ENST00000553444 USP31Q70CQ4 1352 aa16.82■□□□□ 0.28
HNRNPC-206ENST00000553444 KTN1Q86UP2 1357 aaKnown RBP16.82■□□□□ 0.28
HNRNPC-206ENST00000553444 IL2RBP14784 551 aa16.82■□□□□ 0.28
HNRNPC-206ENST00000553444 L3MBTL2Q969R5 705 aa16.82■□□□□ 0.28
HNRNPC-206ENST00000553444 NLRP2Q9NX02 1062 aa16.82■□□□□ 0.28
HNRNPC-206ENST00000553444 GPR162Q16538 588 aa16.81■□□□□ 0.28
HNRNPC-206ENST00000553444 AKT1S1Q96B36 256 aa16.81■□□□□ 0.28
HNRNPC-206ENST00000553444 AKAP12Q02952 1782 aa16.79■□□□□ 0.28
HNRNPC-206ENST00000553444 NHSQ6T4R5 1651 aa16.79■□□□□ 0.28
HNRNPC-206ENST00000553444 SLC16A10Q8TF71 515 aa16.79■□□□□ 0.28
HNRNPC-206ENST00000553444 SLC27A3Q5K4L6 730 aa16.78■□□□□ 0.28
HNRNPC-206ENST00000553444 NME9Q86XW9 330 aa16.78■□□□□ 0.28
HNRNPC-206ENST00000553444 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.78■□□□□ 0.28
HNRNPC-206ENST00000553444 ANKRD24Q8TF21 1146 aa16.78■□□□□ 0.28
HNRNPC-206ENST00000553444 ROCK2O75116 1388 aaKnown RBP16.77■□□□□ 0.28
HNRNPC-206ENST00000553444 GIGYF1O75420 1035 aaPredicted RBP16.77■□□□□ 0.28
HNRNPC-206ENST00000553444 POLD1P28340 1107 aa16.77■□□□□ 0.28
HNRNPC-206ENST00000553444 SBNO2Q9Y2G9 1366 aa16.77■□□□□ 0.27
HNRNPC-206ENST00000553444 PNPLA7Q6ZV29 1317 aa16.76■□□□□ 0.27
HNRNPC-206ENST00000553444 KLHL34Q8N239 644 aa16.76■□□□□ 0.27
HNRNPC-206ENST00000553444 CD163L1Q9NR16 1453 aa16.73■□□□□ 0.27
HNRNPC-206ENST00000553444 PELP1Q8IZL8 1130 aaKnown RBP16.73■□□□□ 0.27
HNRNPC-206ENST00000553444 NLGN2Q8NFZ4 835 aa16.73■□□□□ 0.27
HNRNPC-206ENST00000553444 DDX54Q8TDD1 881 aaKnown RBP16.72■□□□□ 0.27
HNRNPC-206ENST00000553444 TFCP2L1Q9NZI6 479 aa16.72■□□□□ 0.27
HNRNPC-206ENST00000553444 RGPD5Q99666 1765 aa16.72■□□□□ 0.27
HNRNPC-206ENST00000553444 KCNQ4P56696 695 aa16.71■□□□□ 0.27
HNRNPC-206ENST00000553444 IFFO2Q5TF58 517 aa16.71■□□□□ 0.27
HNRNPC-206ENST00000553444 GOLGB1Q14789 3259 aaKnown RBP16.71■□□□□ 0.26
HNRNPC-206ENST00000553444 NSD2O96028 1365 aa16.69■□□□□ 0.26
HNRNPC-206ENST00000553444 PRIM1P49642 420 aaKnown RBP16.69■□□□□ 0.26
HNRNPC-206ENST00000553444 HDGFL2Q7Z4V5 671 aaPredicted RBP16.69■□□□□ 0.26
HNRNPC-206ENST00000553444 TMC1Q8TDI8 760 aa16.69■□□□□ 0.26
HNRNPC-206ENST00000553444 IP6K1Q92551 441 aa16.69■□□□□ 0.26
HNRNPC-206ENST00000553444 SIN3AQ96ST3 1273 aa16.69■□□□□ 0.26
HNRNPC-206ENST00000553444 SLC12A5Q9H2X9 1139 aa16.69■□□□□ 0.26
HNRNPC-206ENST00000553444 EDC4Q6P2E9 1401 aaKnown RBP16.69■□□□□ 0.26
HNRNPC-206ENST00000553444 BTAF1O14981 1849 aa16.68■□□□□ 0.26
HNRNPC-206ENST00000553444 ANKRD36BQ8N2N9 1353 aa16.68■□□□□ 0.26
HNRNPC-206ENST00000553444 GRIN3BO60391 1043 aa16.68■□□□□ 0.26
HNRNPC-206ENST00000553444 YBX3P16989 372 aaKnown RBP eCLIP16.68■□□□□ 0.26
HNRNPC-206ENST00000553444 SYTL4Q96C24 671 aaPredicted RBP16.68■□□□□ 0.26
HNRNPC-206ENST00000553444 USP54Q70EL1 1684 aa16.67■□□□□ 0.26
HNRNPC-206ENST00000553444 LTV1Q96GA3 475 aaPredicted RBP16.67■□□□□ 0.26
HNRNPC-206ENST00000553444 CHD4Q14839 1912 aa16.66■□□□□ 0.26
HNRNPC-206ENST00000553444 MON2Q7Z3U7 1717 aa16.66■□□□□ 0.26
HNRNPC-206ENST00000553444 CCNL1Q9UK58 526 aaPredicted RBP16.66■□□□□ 0.26
HNRNPC-206ENST00000553444 CEP350Q5VT06 3117 aa16.66■□□□□ 0.26
HNRNPC-206ENST00000553444 A0A1W2PP64 1363 aa16.65■□□□□ 0.26
HNRNPC-206ENST00000553444 COL23A1Q86Y22 540 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms