RNA–Protein interactions for RNA: ENST00000552794.1

PPHLN1-222, Transcript of periphilin 1, human

TSL 4

Gene PPHLN1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-222	ENST00000552794	NINL	Q9Y2I6	1382 aa		28.12	■■■□□ 2.09
PPHLN1-222	ENST00000552794	CSB-PGBD3	P0DP91	1061 aa		28.12	■■■□□ 2.09
PPHLN1-222	ENST00000552794	CDCA7	Q9BWT1	371 aa	Predicted RBP	28.12	■■■□□ 2.09
PPHLN1-222	ENST00000552794	ABCC6	O95255	1503 aa		28.12	■■■□□ 2.09
PPHLN1-222	ENST00000552794	USP31	Q70CQ4	1352 aa		28.11	■■■□□ 2.09
PPHLN1-222	ENST00000552794	EDC4	Q6P2E9	1401 aa	Known RBP	28.11	■■■□□ 2.09
PPHLN1-222	ENST00000552794	COL18A1	P39060	1754 aa		28.11	■■■□□ 2.09
PPHLN1-222	ENST00000552794	CD163L1	Q9NR16	1453 aa		28.09	■■■□□ 2.09
PPHLN1-222	ENST00000552794	NFAT5	O94916	1531 aa		28.09	■■■□□ 2.09
PPHLN1-222	ENST00000552794	APBA3	O96018	575 aa		28.09	■■■□□ 2.09
PPHLN1-222	ENST00000552794	DDB1	Q16531	1140 aa		28.09	■■■□□ 2.09
PPHLN1-222	ENST00000552794	SLC12A5	Q9H2X9	1139 aa		28.09	■■■□□ 2.09
PPHLN1-222	ENST00000552794	AXIN2	Q9Y2T1	843 aa		28.09	■■■□□ 2.09
PPHLN1-222	ENST00000552794	ST20-MTHFS	A0A0A6YYL1	179 aa		28.08	■■■□□ 2.09
PPHLN1-222	ENST00000552794	OVOS2	A0A0G2JMS6	1433 aa		28.08	■■■□□ 2.09
PPHLN1-222	ENST00000552794	OVOS2	A0A0J9YW53	1432 aa		28.08	■■■□□ 2.09
PPHLN1-222	ENST00000552794	OVOS2	Q6IE36	1432 aa		28.08	■■■□□ 2.09
PPHLN1-222	ENST00000552794	NME9	Q86XW9	330 aa		28.06	■■■□□ 2.08
PPHLN1-222	ENST00000552794	CARD10	Q9BWT7	1032 aa		28.06	■■■□□ 2.08
PPHLN1-222	ENST00000552794		A0A1W2PP64	1363 aa		28.06	■■■□□ 2.08
PPHLN1-222	ENST00000552794	USP54	Q70EL1	1684 aa		28.06	■■■□□ 2.08
PPHLN1-222	ENST00000552794	EZH2	Q15910	746 aa	Known RBP	28.05	■■■□□ 2.08
PPHLN1-222	ENST00000552794	TESK2	Q96S53	571 aa		28.05	■■■□□ 2.08
PPHLN1-222	ENST00000552794	CAMKK2	Q96RR4	588 aa		28.04	■■■□□ 2.08
PPHLN1-222	ENST00000552794	LRRC37A3	O60309	1634 aa		28.03	■■■□□ 2.08
PPHLN1-222	ENST00000552794	CCDC7	Q96M83	1385 aa		28.03	■■■□□ 2.08
PPHLN1-222	ENST00000552794	PSD	A5PKW4	1024 aa	Predicted RBP	28.03	■■■□□ 2.08
PPHLN1-222	ENST00000552794	SRCAP	Q6ZRS2	3230 aa		28.01	■■■□□ 2.07
PPHLN1-222	ENST00000552794	USP47	Q96K76	1375 aa		27.99	■■■□□ 2.07
PPHLN1-222	ENST00000552794	RGPD5	Q99666	1765 aa		27.99	■■■□□ 2.07
PPHLN1-222	ENST00000552794	TMF1	P82094	1093 aa		27.99	■■■□□ 2.07
PPHLN1-222	ENST00000552794	LRP5	O75197	1615 aa		27.99	■■■□□ 2.07
PPHLN1-222	ENST00000552794	WNK3	Q9BYP7	1800 aa		27.99	■■■□□ 2.07
PPHLN1-222	ENST00000552794	CLSPN	Q9HAW4	1339 aa		27.98	■■■□□ 2.07
PPHLN1-222	ENST00000552794	R3HDM1	Q15032	1099 aa	Known RBP	27.98	■■■□□ 2.07
PPHLN1-222	ENST00000552794	TIMELESS	Q9UNS1	1208 aa		27.98	■■■□□ 2.07
PPHLN1-222	ENST00000552794	ERBB3	P21860	1342 aa		27.97	■■■□□ 2.07
PPHLN1-222	ENST00000552794	CDCA8	Q53HL2	280 aa		27.95	■■■□□ 2.06
PPHLN1-222	ENST00000552794	NBPF14	Q5TI25	921 aa		27.95	■■■□□ 2.06
PPHLN1-222	ENST00000552794	PEAK1	Q9H792	1746 aa		27.95	■■■□□ 2.06
PPHLN1-222	ENST00000552794	LTN1	O94822	1766 aa		27.94	■■■□□ 2.06
PPHLN1-222	ENST00000552794	EXOC5	O00471	708 aa		27.94	■■■□□ 2.06
PPHLN1-222	ENST00000552794	NLRP2	Q9NX02	1062 aa		27.94	■■■□□ 2.06
PPHLN1-222	ENST00000552794	BCL9	O00512	1426 aa		27.93	■■■□□ 2.06
PPHLN1-222	ENST00000552794	COG3	Q96JB2	828 aa		27.93	■■■□□ 2.06
PPHLN1-222	ENST00000552794	ANKRD36B	Q8N2N9	1353 aa		27.93	■■■□□ 2.06
PPHLN1-222	ENST00000552794	RREB1	Q92766	1687 aa		27.93	■■■□□ 2.06
PPHLN1-222	ENST00000552794	BCL11B	Q9C0K0	894 aa	Predicted RBP	27.91	■■■□□ 2.06
PPHLN1-222	ENST00000552794	TNS2	Q63HR2	1409 aa		27.91	■■■□□ 2.06
PPHLN1-222	ENST00000552794	MARCH10	Q8NA82	808 aa	Predicted RBP	27.9	■■■□□ 2.06
PPHLN1-222	ENST00000552794	ANKRD24	Q8TF21	1146 aa		27.9	■■■□□ 2.06
PPHLN1-222	ENST00000552794	PLSCR1	O15162	318 aa		27.88	■■■□□ 2.05
PPHLN1-222	ENST00000552794	PCGF6	Q9BYE7	350 aa		27.88	■■■□□ 2.05
PPHLN1-222	ENST00000552794	RGPD3	A6NKT7	1758 aa	Predicted RBP	27.87	■■■□□ 2.05
PPHLN1-222	ENST00000552794	RGPD4	Q7Z3J3	1758 aa		27.87	■■■□□ 2.05
PPHLN1-222	ENST00000552794	IL2RB	P14784	551 aa		27.87	■■■□□ 2.05
PPHLN1-222	ENST00000552794	SBF2	Q86WG5	1849 aa		27.87	■■■□□ 2.05
PPHLN1-222	ENST00000552794	NUP188	Q5SRE5	1749 aa		27.87	■■■□□ 2.05
PPHLN1-222	ENST00000552794	IP6K1	Q92551	441 aa		27.86	■■■□□ 2.05
PPHLN1-222	ENST00000552794	AMPH	P49418	695 aa		27.82	■■■□□ 2.04
PPHLN1-222	ENST00000552794	FAM208A	Q9UK61	1670 aa	Known RBP	27.81	■■■□□ 2.04
PPHLN1-222	ENST00000552794	MAP3K19	Q56UN5	1328 aa		27.8	■■■□□ 2.04
PPHLN1-222	ENST00000552794	RTL1	A6NKG5	1358 aa		27.78	■■■□□ 2.04
PPHLN1-222	ENST00000552794	LTV1	Q96GA3	475 aa	Predicted RBP	27.78	■■■□□ 2.04
PPHLN1-222	ENST00000552794	HOXC9	P31274	260 aa		27.77	■■■□□ 2.04
PPHLN1-222	ENST00000552794	FYB1	O15117	783 aa		27.76	■■■□□ 2.03
PPHLN1-222	ENST00000552794	GGNBP2	Q9H3C7	697 aa		27.75	■■■□□ 2.03
PPHLN1-222	ENST00000552794	PTF1A	Q7RTS3	328 aa		27.74	■■■□□ 2.03
PPHLN1-222	ENST00000552794	SMG6	Q86US8	1419 aa	Known RBP	27.73	■■■□□ 2.03
PPHLN1-222	ENST00000552794	NHS	Q6T4R5	1651 aa		27.72	■■■□□ 2.03
PPHLN1-222	ENST00000552794	RRS1	Q15050	365 aa	Known RBP	27.7	■■■□□ 2.02
PPHLN1-222	ENST00000552794	TXNRD1	Q16881	649 aa		27.7	■■■□□ 2.02
PPHLN1-222	ENST00000552794	ACSBG1	Q96GR2	724 aa		27.7	■■■□□ 2.02
PPHLN1-222	ENST00000552794	SPON1	Q9HCB6	807 aa		27.7	■■■□□ 2.02
PPHLN1-222	ENST00000552794	KCNQ2	O43526	872 aa		27.69	■■■□□ 2.02
PPHLN1-222	ENST00000552794	KIF20B	Q96Q89	1820 aa		27.69	■■■□□ 2.02
PPHLN1-222	ENST00000552794	FBLN1	P23142	703 aa		27.68	■■■□□ 2.02
PPHLN1-222	ENST00000552794	CCER1	Q8TC90	406 aa	Predicted RBP	27.68	■■■□□ 2.02
PPHLN1-222	ENST00000552794	KIF24	Q5T7B8	1368 aa		27.68	■■■□□ 2.02
PPHLN1-222	ENST00000552794	ANO8	Q9HCE9	1232 aa	Predicted RBP	27.67	■■■□□ 2.02
PPHLN1-222	ENST00000552794	STK32B	Q9NY57	414 aa		27.67	■■■□□ 2.02
PPHLN1-222	ENST00000552794	NSD3	Q9BZ95	1437 aa		27.67	■■■□□ 2.02
PPHLN1-222	ENST00000552794	MYOM1	P52179	1685 aa		27.66	■■■□□ 2.02
PPHLN1-222	ENST00000552794	PROM2	Q8N271	834 aa		27.66	■■■□□ 2.02
PPHLN1-222	ENST00000552794	DDX54	Q8TDD1	881 aa	Known RBP	27.66	■■■□□ 2.02
PPHLN1-222	ENST00000552794	PPP1R1B	Q9UD71	204 aa	Predicted RBP	27.66	■■■□□ 2.02
PPHLN1-222	ENST00000552794	FLT4	P35916	1363 aa		27.65	■■■□□ 2.02
PPHLN1-222	ENST00000552794	KAT6B	Q8WYB5	2073 aa		27.64	■■■□□ 2.02
PPHLN1-222	ENST00000552794	CGNL1	Q0VF96	1302 aa		27.64	■■■□□ 2.01
PPHLN1-222	ENST00000552794	INSR	P06213	1382 aa		27.62	■■■□□ 2.01
PPHLN1-222	ENST00000552794	EIF4G2	P78344	907 aa	Known RBP eCLIP	27.62	■■■□□ 2.01
PPHLN1-222	ENST00000552794	ZCRB1	Q8TBF4	217 aa	Known RBP	27.62	■■■□□ 2.01
PPHLN1-222	ENST00000552794	RAPGEF4	Q8WZA2	1011 aa		27.61	■■■□□ 2.01
PPHLN1-222	ENST00000552794	CARD14	Q9BXL6	1004 aa		27.61	■■■□□ 2.01
PPHLN1-222	ENST00000552794	SLC15A2	Q16348	729 aa		27.6	■■■□□ 2.01
PPHLN1-222	ENST00000552794	BTAF1	O14981	1849 aa		27.6	■■■□□ 2.01
PPHLN1-222	ENST00000552794	POLR3GL	Q9BT43	218 aa		27.59	■■■□□ 2.01
PPHLN1-222	ENST00000552794	MEGF6	O75095	1541 aa		27.58	■■■□□ 2.01
PPHLN1-222	ENST00000552794	NBPF6	Q5VWK0	638 aa		27.58	■■■□□ 2.01
PPHLN1-222	ENST00000552794	NBPF4	Q96M43	638 aa		27.58	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms