RNA–Protein interactions for RNA: ENST00000552742.5

PFDN5-218, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-218ENST00000552742 LMO7Q8WWI1 1683 aa13.59□□□□□ -0.23
PFDN5-218ENST00000552742 NFAT5O94916 1531 aa13.59□□□□□ -0.23
PFDN5-218ENST00000552742 USP35Q9P2H5 1018 aa13.59□□□□□ -0.23
PFDN5-218ENST00000552742 SPATA31A1Q5TZJ5 1347 aa13.59□□□□□ -0.23
PFDN5-218ENST00000552742 OVOS2A0A0J9YW53 1432 aa13.58□□□□□ -0.24
PFDN5-218ENST00000552742 OVOS2Q6IE36 1432 aa13.58□□□□□ -0.24
PFDN5-218ENST00000552742 BRWD3Q6RI45 1802 aa13.58□□□□□ -0.24
PFDN5-218ENST00000552742 KIF7Q2M1P5 1343 aa13.58□□□□□ -0.24
PFDN5-218ENST00000552742 NSD3Q9BZ95 1437 aa13.57□□□□□ -0.24
PFDN5-218ENST00000552742 LTN1O94822 1766 aa13.57□□□□□ -0.24
PFDN5-218ENST00000552742 KIF20BQ96Q89 1820 aa13.56□□□□□ -0.24
PFDN5-218ENST00000552742 A0A0G2JS52 829 aa13.56□□□□□ -0.24
PFDN5-218ENST00000552742 MYT1Q01538 1121 aa13.56□□□□□ -0.24
PFDN5-218ENST00000552742 COL5A2P05997 1499 aaPredicted RBP13.55□□□□□ -0.24
PFDN5-218ENST00000552742 UPF1Q92900 1129 aaKnown RBP eCLIP13.55□□□□□ -0.24
PFDN5-218ENST00000552742 TOM1L2Q6ZVM7 507 aa13.54□□□□□ -0.24
PFDN5-218ENST00000552742 TCP11L2Q8N4U5 519 aa13.54□□□□□ -0.24
PFDN5-218ENST00000552742 CGNL1Q0VF96 1302 aa13.54□□□□□ -0.24
PFDN5-218ENST00000552742 CSB-PGBD3P0DP91 1061 aa13.53□□□□□ -0.24
PFDN5-218ENST00000552742 RRS1Q15050 365 aaKnown RBP13.53□□□□□ -0.24
PFDN5-218ENST00000552742 IP6K1Q92551 441 aa13.53□□□□□ -0.24
PFDN5-218ENST00000552742 MAP3K19Q56UN5 1328 aa13.53□□□□□ -0.24
PFDN5-218ENST00000552742 WDR17Q8IZU2 1322 aa13.53□□□□□ -0.24
PFDN5-218ENST00000552742 AMPHP49418 695 aa13.52□□□□□ -0.25
PFDN5-218ENST00000552742 BARGINQ6ZT62 677 aa13.52□□□□□ -0.25
PFDN5-218ENST00000552742 KRT27Q7Z3Y8 459 aa13.52□□□□□ -0.25
PFDN5-218ENST00000552742 LTV1Q96GA3 475 aaPredicted RBP13.52□□□□□ -0.25
PFDN5-218ENST00000552742 WASHC2AQ641Q2 1341 aa13.52□□□□□ -0.25
PFDN5-218ENST00000552742 CCDC7Q96M83 1385 aa13.52□□□□□ -0.25
PFDN5-218ENST00000552742 CRB1P82279 1406 aa13.52□□□□□ -0.25
PFDN5-218ENST00000552742 MAP2P11137 1827 aaKnown RBP13.51□□□□□ -0.25
PFDN5-218ENST00000552742 FAM182BQ5T319 152 aa13.51□□□□□ -0.25
PFDN5-218ENST00000552742 ANKRD24Q8TF21 1146 aa13.51□□□□□ -0.25
PFDN5-218ENST00000552742 CARD10Q9BWT7 1032 aa13.51□□□□□ -0.25
PFDN5-218ENST00000552742 THRAP3Q9Y2W1 955 aaKnown RBP13.51□□□□□ -0.25
PFDN5-218ENST00000552742 HOXC9P31274 260 aa13.5□□□□□ -0.25
PFDN5-218ENST00000552742 TNNT2P45379 298 aaPredicted RBP13.5□□□□□ -0.25
PFDN5-218ENST00000552742 NLRP2Q9NX02 1062 aa13.5□□□□□ -0.25
PFDN5-218ENST00000552742 KNSTRNQ9Y448 316 aa13.5□□□□□ -0.25
PFDN5-218ENST00000552742 THSD7AQ9UPZ6 1657 aa13.49□□□□□ -0.25
PFDN5-218ENST00000552742 ABCC6O95255 1503 aa13.49□□□□□ -0.25
PFDN5-218ENST00000552742 ERBB3P21860 1342 aa13.48□□□□□ -0.25
PFDN5-218ENST00000552742 PER1O15534 1290 aaPredicted RBP13.48□□□□□ -0.25
PFDN5-218ENST00000552742 EMILIN1Q9Y6C2 1016 aa13.48□□□□□ -0.25
PFDN5-218ENST00000552742 PPM1GO15355 546 aaPredicted RBP13.47□□□□□ -0.25
PFDN5-218ENST00000552742 PDE3BQ13370 1112 aa13.47□□□□□ -0.25
PFDN5-218ENST00000552742 HSP90AB2PQ58FF8 381 aa13.47□□□□□ -0.25
PFDN5-218ENST00000552742 RGPD2P0DJD1 1756 aa13.47□□□□□ -0.25
PFDN5-218ENST00000552742 AMER1Q5JTC6 1135 aaPredicted RBP13.46□□□□□ -0.25
PFDN5-218ENST00000552742 MORC1Q86VD1 984 aa13.46□□□□□ -0.25
PFDN5-218ENST00000552742 POLKQ9UBT6 870 aa13.46□□□□□ -0.25
PFDN5-218ENST00000552742 ANKRD26Q9UPS8 1709 aa13.46□□□□□ -0.25
PFDN5-218ENST00000552742 BLMP54132 1417 aaPredicted RBP13.46□□□□□ -0.26
PFDN5-218ENST00000552742 PEAK1Q9H792 1746 aa13.45□□□□□ -0.26
PFDN5-218ENST00000552742 CNGB1Q14028 1251 aaPredicted RBP13.44□□□□□ -0.26
PFDN5-218ENST00000552742 DDB1Q16531 1140 aa13.44□□□□□ -0.26
PFDN5-218ENST00000552742 CDCA7Q9BWT1 371 aaPredicted RBP13.44□□□□□ -0.26
PFDN5-218ENST00000552742 KAT6BQ8WYB5 2073 aa13.43□□□□□ -0.26
PFDN5-218ENST00000552742 EXOC5O00471 708 aa13.43□□□□□ -0.26
PFDN5-218ENST00000552742 ZEB1P37275 1124 aaPredicted RBP13.43□□□□□ -0.26
PFDN5-218ENST00000552742 CC2D1BQ5T0F9 858 aaKnown RBP13.43□□□□□ -0.26
PFDN5-218ENST00000552742 NBPF6Q5VWK0 638 aa13.43□□□□□ -0.26
PFDN5-218ENST00000552742 CCDC125Q86Z20 511 aa13.43□□□□□ -0.26
PFDN5-218ENST00000552742 NBPF4Q96M43 638 aa13.43□□□□□ -0.26
PFDN5-218ENST00000552742 PARP4Q9UKK3 1724 aaKnown RBP13.43□□□□□ -0.26
PFDN5-218ENST00000552742 RTL1A6NKG5 1358 aa13.43□□□□□ -0.26
PFDN5-218ENST00000552742 NSD2O96028 1365 aa13.43□□□□□ -0.26
PFDN5-218ENST00000552742 INSRP06213 1382 aa13.43□□□□□ -0.26
PFDN5-218ENST00000552742 FLT4P35916 1363 aa13.43□□□□□ -0.26
PFDN5-218ENST00000552742 WNK3Q9BYP7 1800 aa13.42□□□□□ -0.26
PFDN5-218ENST00000552742 FAM196AQ6ZSG2 479 aa13.42□□□□□ -0.26
PFDN5-218ENST00000552742 MARCH10Q8NA82 808 aaPredicted RBP13.42□□□□□ -0.26
PFDN5-218ENST00000552742 KIF24Q5T7B8 1368 aa13.42□□□□□ -0.26
PFDN5-218ENST00000552742 DISP2A7MBM2 1401 aa13.41□□□□□ -0.26
PFDN5-218ENST00000552742 IL2RBP14784 551 aa13.41□□□□□ -0.26
PFDN5-218ENST00000552742 USHBP1Q8N6Y0 703 aa13.41□□□□□ -0.26
PFDN5-218ENST00000552742 TRIM37O94972 964 aa13.4□□□□□ -0.26
PFDN5-218ENST00000552742 FAM208AQ9UK61 1670 aaKnown RBP13.4□□□□□ -0.26
PFDN5-218ENST00000552742 SF3B2Q13435 895 aaKnown RBP13.39□□□□□ -0.27
PFDN5-218ENST00000552742 DEFB132Q7Z7B7 95 aa13.39□□□□□ -0.27
PFDN5-218ENST00000552742 LRRC37A3O60309 1634 aa13.39□□□□□ -0.27
PFDN5-218ENST00000552742 SMG6Q86US8 1419 aaKnown RBP13.38□□□□□ -0.27
PFDN5-218ENST00000552742 EIF4A2Q14240 407 aaKnown RBP13.37□□□□□ -0.27
PFDN5-218ENST00000552742 DDX54Q8TDD1 881 aaKnown RBP13.37□□□□□ -0.27
PFDN5-218ENST00000552742 EYA1Q99502 592 aa13.37□□□□□ -0.27
PFDN5-218ENST00000552742 SBF2Q86WG5 1849 aa13.36□□□□□ -0.27
PFDN5-218ENST00000552742 MTHFSP49914 203 aa13.36□□□□□ -0.27
PFDN5-218ENST00000552742 NPC1L1Q9UHC9 1359 aa13.35□□□□□ -0.27
PFDN5-218ENST00000552742 PTF1AQ7RTS3 328 aa13.35□□□□□ -0.27
PFDN5-218ENST00000552742 ZCRB1Q8TBF4 217 aaKnown RBP13.35□□□□□ -0.27
PFDN5-218ENST00000552742 RAPGEF4Q8WZA2 1011 aa13.35□□□□□ -0.27
PFDN5-218ENST00000552742 RGPD1P0DJD0 1748 aa13.34□□□□□ -0.27
PFDN5-218ENST00000552742 OVOS2A0A0G2JMS6 1433 aa13.34□□□□□ -0.27
PFDN5-218ENST00000552742 APBA3O96018 575 aa13.34□□□□□ -0.27
PFDN5-218ENST00000552742 TATP17735 454 aaPredicted RBP13.34□□□□□ -0.27
PFDN5-218ENST00000552742 EN1Q05925 392 aaPredicted RBP13.34□□□□□ -0.27
PFDN5-218ENST00000552742 DDX10Q13206 875 aaKnown RBP13.34□□□□□ -0.27
PFDN5-218ENST00000552742 MEGF6O75095 1541 aa13.34□□□□□ -0.27
PFDN5-218ENST00000552742 TNS2Q63HR2 1409 aa13.33□□□□□ -0.28
PFDN5-218ENST00000552742 BAG6P46379 1132 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms