RNA–Protein interactions for RNA: ENST00000552412.1

CCDC59-206, Transcript of coiled-coil domain containing 59, humanhuman

TSL 3

Gene CCDC59, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-206ENST00000552412 ROBO2Q9HCK4 1378 aa8.86□□□□□ -0.99
CCDC59-206ENST00000552412 NALCNQ8IZF0 1738 aa8.85□□□□□ -0.99
CCDC59-206ENST00000552412 DIAPH1O60610 1272 aaKnown RBP8.85□□□□□ -0.99
CCDC59-206ENST00000552412 FCHSD2O94868 740 aa8.85□□□□□ -0.99
CCDC59-206ENST00000552412 MS4A3Q96HJ5 214 aa8.85□□□□□ -0.99
CCDC59-206ENST00000552412 PLEKHF1Q96S99 279 aa8.85□□□□□ -0.99
CCDC59-206ENST00000552412 CRBNQ96SW2 442 aa8.85□□□□□ -0.99
CCDC59-206ENST00000552412 CEP170BQ9Y4F5 1589 aaPredicted RBP8.85□□□□□ -0.99
CCDC59-206ENST00000552412 SETD1BQ9UPS6 1966 aaKnown RBP8.84□□□□□ -0.99
CCDC59-206ENST00000552412 MAPK8IP3Q9UPT6 1336 aa8.84□□□□□ -0.99
CCDC59-206ENST00000552412 PLEKHG3A1L390 1219 aa8.84□□□□□ -0.99
CCDC59-206ENST00000552412 NUBP1P53384 320 aa8.84□□□□□ -0.99
CCDC59-206ENST00000552412 CENPQQ7L2Z9 268 aaPredicted RBP8.84□□□□□ -0.99
CCDC59-206ENST00000552412 ANKARQ7Z5J8 1434 aa8.84□□□□□ -0.99
CCDC59-206ENST00000552412 TXNDC2Q86VQ3 553 aa8.84□□□□□ -0.99
CCDC59-206ENST00000552412 FAM212AQ96EL1 285 aa8.84□□□□□ -0.99
CCDC59-206ENST00000552412 PTPRUQ92729 1446 aa8.83□□□□□ -1
CCDC59-206ENST00000552412 NEFMP07197 916 aa8.83□□□□□ -1
CCDC59-206ENST00000552412 LTKP29376 864 aa8.83□□□□□ -1
CCDC59-206ENST00000552412 DCAF8Q5TAQ9 597 aa8.83□□□□□ -1
CCDC59-206ENST00000552412 COG3Q96JB2 828 aa8.83□□□□□ -1
CCDC59-206ENST00000552412 TTC21AQ8NDW8 1320 aa8.82□□□□□ -1
CCDC59-206ENST00000552412 KDM2BQ8NHM5 1336 aa8.82□□□□□ -1
CCDC59-206ENST00000552412 USP54Q70EL1 1684 aa8.82□□□□□ -1
CCDC59-206ENST00000552412 OVOS2A0A0J9YW53 1432 aa8.82□□□□□ -1
CCDC59-206ENST00000552412 USP6P35125 1406 aa8.82□□□□□ -1
CCDC59-206ENST00000552412 OVOS2Q6IE36 1432 aa8.82□□□□□ -1
CCDC59-206ENST00000552412 PLIN1O60240 522 aa8.82□□□□□ -1
CCDC59-206ENST00000552412 TMPOP42166 694 aaKnown RBP8.82□□□□□ -1
CCDC59-206ENST00000552412 CALD1Q05682 793 aaKnown RBP8.82□□□□□ -1
CCDC59-206ENST00000552412 ZNF428Q96B54 188 aa8.82□□□□□ -1
CCDC59-206ENST00000552412 KIF12Q96FN5 646 aa8.82□□□□□ -1
CCDC59-206ENST00000552412 POLKQ9UBT6 870 aa8.82□□□□□ -1
CCDC59-206ENST00000552412 ADAMTSL3P82987 1691 aa8.81□□□□□ -1
CCDC59-206ENST00000552412 U2SURPO15042 1029 aaKnown RBP8.81□□□□□ -1
CCDC59-206ENST00000552412 RARSP54136 660 aaKnown RBP8.81□□□□□ -1
CCDC59-206ENST00000552412 LHX8Q68G74 356 aa8.81□□□□□ -1
CCDC59-206ENST00000552412 USP31Q70CQ4 1352 aa8.81□□□□□ -1
CCDC59-206ENST00000552412 PRR36Q9H6K5 1346 aa8.8□□□□□ -1
CCDC59-206ENST00000552412 SSH2Q76I76 1423 aa8.8□□□□□ -1
CCDC59-206ENST00000552412 MAP3K13O43283 966 aa8.8□□□□□ -1
CCDC59-206ENST00000552412 LMOD3Q0VAK6 560 aa8.8□□□□□ -1
CCDC59-206ENST00000552412 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.8□□□□□ -1
CCDC59-206ENST00000552412 RSPH6AQ9H0K4 717 aa8.8□□□□□ -1
CCDC59-206ENST00000552412 FMN2Q9NZ56 1722 aa8.8□□□□□ -1
CCDC59-206ENST00000552412 KIF24Q5T7B8 1368 aa8.79□□□□□ -1
CCDC59-206ENST00000552412 C20orf194Q5TEA3 1177 aa8.79□□□□□ -1
CCDC59-206ENST00000552412 TRIM35Q9UPQ4 493 aa8.79□□□□□ -1
CCDC59-206ENST00000552412 CHD2O14647 1828 aaKnown RBP8.79□□□□□ -1
CCDC59-206ENST00000552412 TTC21BQ7Z4L5 1316 aa8.79□□□□□ -1
CCDC59-206ENST00000552412 BCAR3O75815 825 aa8.78□□□□□ -1
CCDC59-206ENST00000552412 IL13P35225 146 aa8.78□□□□□ -1
CCDC59-206ENST00000552412 CEBPAP49715 358 aaPredicted RBP8.78□□□□□ -1
CCDC59-206ENST00000552412 BRPF1P55201 1214 aaPredicted RBP8.78□□□□□ -1
CCDC59-206ENST00000552412 NEUROD2Q15784 382 aa8.78□□□□□ -1
CCDC59-206ENST00000552412 NFE2L2Q16236 605 aa8.78□□□□□ -1
CCDC59-206ENST00000552412 NME9Q86XW9 330 aa8.78□□□□□ -1
CCDC59-206ENST00000552412 AMOTL2Q9Y2J4 779 aa8.78□□□□□ -1
CCDC59-206ENST00000552412 RRP7AQ9Y3A4 280 aaKnown RBP8.78□□□□□ -1
CCDC59-206ENST00000552412 ACEP12821 1306 aa8.78□□□□□ -1
CCDC59-206ENST00000552412 RGPD1P0DJD0 1748 aa8.77□□□□□ -1
CCDC59-206ENST00000552412 CANXP27824 592 aaKnown RBP8.77□□□□□ -1.01
CCDC59-206ENST00000552412 RIPK4P57078 832 aa8.77□□□□□ -1.01
CCDC59-206ENST00000552412 ALDH1L2Q3SY69 923 aa8.77□□□□□ -1.01
CCDC59-206ENST00000552412 CLUAP1Q96AJ1 413 aa8.77□□□□□ -1.01
CCDC59-206ENST00000552412 KIF16BQ96L93 1317 aa8.77□□□□□ -1.01
CCDC59-206ENST00000552412 ANP32AP39687 249 aaKnown RBP8.76□□□□□ -1.01
CCDC59-206ENST00000552412 PMFBP1Q8TBY8 1022 aa8.76□□□□□ -1.01
CCDC59-206ENST00000552412 PCDHB13Q9Y5F0 798 aa8.76□□□□□ -1.01
CCDC59-206ENST00000552412 DLG5Q8TDM6 1919 aa8.76□□□□□ -1.01
CCDC59-206ENST00000552412 ARHGEF10O15013 1369 aa8.75□□□□□ -1.01
CCDC59-206ENST00000552412 PRKAR2BP31323 418 aa8.75□□□□□ -1.01
CCDC59-206ENST00000552412 ZKSCAN2Q63HK3 967 aa8.75□□□□□ -1.01
CCDC59-206ENST00000552412 SLC26A8Q96RN1 970 aa8.75□□□□□ -1.01
CCDC59-206ENST00000552412 BACH2Q9BYV9 841 aa8.75□□□□□ -1.01
CCDC59-206ENST00000552412 IFT57Q9NWB7 429 aa8.75□□□□□ -1.01
CCDC59-206ENST00000552412 EMILIN1Q9Y6C2 1016 aa8.75□□□□□ -1.01
CCDC59-206ENST00000552412 SBNO1A3KN83 1393 aa8.74□□□□□ -1.01
CCDC59-206ENST00000552412 NWD1Q149M9 1564 aa8.74□□□□□ -1.01
CCDC59-206ENST00000552412 IPO8O15397 1037 aaKnown RBP8.74□□□□□ -1.01
CCDC59-206ENST00000552412 HAP1P54257 671 aaPredicted RBP8.74□□□□□ -1.01
CCDC59-206ENST00000552412 GNAI1P63096 354 aa8.74□□□□□ -1.01
CCDC59-206ENST00000552412 ANKLE2Q86XL3 938 aa8.74□□□□□ -1.01
CCDC59-206ENST00000552412 ANP32EQ9BTT0 268 aa8.74□□□□□ -1.01
CCDC59-206ENST00000552412 CHMP4BQ9H444 224 aaKnown RBP8.74□□□□□ -1.01
CCDC59-206ENST00000552412 VIRMAQ69YN4 1812 aaKnown RBP8.74□□□□□ -1.01
CCDC59-206ENST00000552412 PIK3C2AO00443 1686 aa8.74□□□□□ -1.01
CCDC59-206ENST00000552412 FLT4P35916 1363 aa8.73□□□□□ -1.01
CCDC59-206ENST00000552412 ATMINO43313 823 aaPredicted RBP8.73□□□□□ -1.01
CCDC59-206ENST00000552412 ZNF853P0CG23 659 aa8.73□□□□□ -1.01
CCDC59-206ENST00000552412 PYGBP11216 843 aa8.73□□□□□ -1.01
CCDC59-206ENST00000552412 PDE4AP27815 886 aa8.73□□□□□ -1.01
CCDC59-206ENST00000552412 MVPQ14764 893 aaKnown RBP8.73□□□□□ -1.01
CCDC59-206ENST00000552412 DZIP1LQ8IYY4 767 aaKnown RBP8.73□□□□□ -1.01
CCDC59-206ENST00000552412 PEAK1Q9H792 1746 aa8.73□□□□□ -1.01
CCDC59-206ENST00000552412 RGPD8O14715 1765 aaPredicted RBP8.73□□□□□ -1.01
CCDC59-206ENST00000552412 RTL1A6NKG5 1358 aa8.73□□□□□ -1.01
CCDC59-206ENST00000552412 ADGRL3Q9HAR2 1447 aa8.72□□□□□ -1.01
CCDC59-206ENST00000552412 PPM1GO15355 546 aaPredicted RBP8.72□□□□□ -1.01
CCDC59-206ENST00000552412 EXOSC9Q06265 439 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms