RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 GIGYF1O75420 1035 aaPredicted RBP12.7□□□□□ -0.38
CHPT1-209ENST00000552329 POM121CA8CG34 1229 aa12.69□□□□□ -0.38
CHPT1-209ENST00000552329 WDR4P57081 412 aaKnown RBP12.69□□□□□ -0.38
CHPT1-209ENST00000552329 NR5A1Q13285 461 aa12.69□□□□□ -0.38
CHPT1-209ENST00000552329 NBPF20Q3BBV1 942 aa12.69□□□□□ -0.38
CHPT1-209ENST00000552329 ZNF330Q9Y3S2 320 aaPredicted RBP12.69□□□□□ -0.38
CHPT1-209ENST00000552329 INTS6LQ5JSJ4 861 aaKnown RBP12.68□□□□□ -0.38
CHPT1-209ENST00000552329 TRAF7Q6Q0C0 670 aa12.68□□□□□ -0.38
CHPT1-209ENST00000552329 ZFAND3Q9H8U3 227 aa12.68□□□□□ -0.38
CHPT1-209ENST00000552329 EIF4G2P78344 907 aaKnown RBP eCLIP12.67□□□□□ -0.38
CHPT1-209ENST00000552329 WASHC4Q2M389 1173 aa12.67□□□□□ -0.38
CHPT1-209ENST00000552329 PROSER2Q86WR7 435 aaPredicted RBP12.67□□□□□ -0.38
CHPT1-209ENST00000552329 WWC1Q8IX03 1113 aa12.67□□□□□ -0.38
CHPT1-209ENST00000552329 CCDC116Q8IYX3 515 aa12.67□□□□□ -0.38
CHPT1-209ENST00000552329 CDV3Q9UKY7 258 aaKnown RBP12.67□□□□□ -0.38
CHPT1-209ENST00000552329 AXIN1O15169 862 aa12.66□□□□□ -0.38
CHPT1-209ENST00000552329 ZIC2O95409 532 aaPredicted RBP12.66□□□□□ -0.38
CHPT1-209ENST00000552329 AVPP01185 164 aa12.66□□□□□ -0.38
CHPT1-209ENST00000552329 ITPKCQ96DU7 683 aa12.66□□□□□ -0.38
CHPT1-209ENST00000552329 AAASQ9NRG9 546 aa12.66□□□□□ -0.38
CHPT1-209ENST00000552329 TMPRSS4Q9NRS4 437 aa12.66□□□□□ -0.38
CHPT1-209ENST00000552329 DACH1Q9UI36 760 aa12.66□□□□□ -0.38
CHPT1-209ENST00000552329 CAPN5O15484 640 aaPredicted RBP12.65□□□□□ -0.38
CHPT1-209ENST00000552329 PPP1R26Q5T8A7 1209 aaPredicted RBP12.65□□□□□ -0.38
CHPT1-209ENST00000552329 ERVH48-1M5A8F1 160 aa12.63□□□□□ -0.39
CHPT1-209ENST00000552329 BMP1P13497 986 aa12.63□□□□□ -0.39
CHPT1-209ENST00000552329 TIMP2P16035 220 aa12.63□□□□□ -0.39
CHPT1-209ENST00000552329 SEMA3FQ13275 785 aa12.63□□□□□ -0.39
CHPT1-209ENST00000552329 CEP126Q9P2H0 1117 aa12.63□□□□□ -0.39
CHPT1-209ENST00000552329 KLF16Q9BXK1 252 aaPredicted RBP12.62□□□□□ -0.39
CHPT1-209ENST00000552329 FNBP4Q8N3X1 1017 aaPredicted RBP12.61□□□□□ -0.39
CHPT1-209ENST00000552329 ESPNB1AK53 854 aa12.6□□□□□ -0.39
CHPT1-209ENST00000552329 CBLBQ13191 982 aa12.6□□□□□ -0.39
CHPT1-209ENST00000552329 CTC1Q2NKJ3 1217 aa12.6□□□□□ -0.39
CHPT1-209ENST00000552329 TSGA10IPQ3SY00 556 aa12.59□□□□□ -0.39
CHPT1-209ENST00000552329 ZNF784Q8NCA9 323 aaPredicted RBP12.59□□□□□ -0.39
CHPT1-209ENST00000552329 CYLDQ9NQC7 956 aa12.59□□□□□ -0.39
CHPT1-209ENST00000552329 EMILIN1Q9Y6C2 1016 aa12.59□□□□□ -0.39
CHPT1-209ENST00000552329 A6NJR5 290 aa12.58□□□□□ -0.4
CHPT1-209ENST00000552329 C14orf37Q86TY3 774 aa12.58□□□□□ -0.4
CHPT1-209ENST00000552329 ADAMTS19Q8TE59 1207 aa12.58□□□□□ -0.4
CHPT1-209ENST00000552329 PCDHB11Q9Y5F2 797 aa12.58□□□□□ -0.4
CHPT1-209ENST00000552329 DHX9Q08211 1270 aaKnown RBP12.57□□□□□ -0.4
CHPT1-209ENST00000552329 SLFNL1Q499Z3 407 aa12.57□□□□□ -0.4
CHPT1-209ENST00000552329 HDGFL1Q5TGJ6 251 aa12.57□□□□□ -0.4
CHPT1-209ENST00000552329 PGPEP1Q9NXJ5 209 aa12.57□□□□□ -0.4
CHPT1-209ENST00000552329 ZNF777Q9ULD5 760 aaPredicted RBP12.57□□□□□ -0.4
CHPT1-209ENST00000552329 MCCD1P59942 119 aaPredicted RBP12.56□□□□□ -0.4
CHPT1-209ENST00000552329 CRIPAKQ8N1N5 446 aa12.56□□□□□ -0.4
CHPT1-209ENST00000552329 CCDC85AQ96PX6 553 aaPredicted RBP12.56□□□□□ -0.4
CHPT1-209ENST00000552329 ALG2Q9H553 416 aa12.56□□□□□ -0.4
CHPT1-209ENST00000552329 PIK3CDO00329 1044 aa12.55□□□□□ -0.4
CHPT1-209ENST00000552329 SMCPP49901 116 aaPredicted RBP12.55□□□□□ -0.4
CHPT1-209ENST00000552329 RNF135Q8IUD6 432 aa12.55□□□□□ -0.4
CHPT1-209ENST00000552329 ZNF592Q92610 1267 aa12.55□□□□□ -0.4
CHPT1-209ENST00000552329 CDCA7Q9BWT1 371 aaPredicted RBP12.55□□□□□ -0.4
CHPT1-209ENST00000552329 C6orf118Q5T5N4 469 aa12.54□□□□□ -0.4
CHPT1-209ENST00000552329 RNF20Q5VTR2 975 aa12.54□□□□□ -0.4
CHPT1-209ENST00000552329 AGBL1Q96MI9 1066 aa12.54□□□□□ -0.4
CHPT1-209ENST00000552329 ZMYND15Q9H091 742 aa12.54□□□□□ -0.4
CHPT1-209ENST00000552329 ATP13A2Q9NQ11 1180 aa12.54□□□□□ -0.4
CHPT1-209ENST00000552329 POTECB2RU33 542 aa12.53□□□□□ -0.4
CHPT1-209ENST00000552329 TRAK2O60296 914 aa12.53□□□□□ -0.4
CHPT1-209ENST00000552329 SCTRP47872 440 aa12.53□□□□□ -0.4
CHPT1-209ENST00000552329 TRIM46Q7Z4K8 759 aa12.53□□□□□ -0.4
CHPT1-209ENST00000552329 SEPT12Q8IYM1 358 aa12.53□□□□□ -0.4
CHPT1-209ENST00000552329 ADD1P35611 737 aaKnown RBP12.52□□□□□ -0.41
CHPT1-209ENST00000552329 SOX11P35716 441 aa12.52□□□□□ -0.41
CHPT1-209ENST00000552329 GLMNQ92990 594 aa12.52□□□□□ -0.41
CHPT1-209ENST00000552329 PURBQ96QR8 312 aaKnown RBP12.52□□□□□ -0.41
CHPT1-209ENST00000552329 OXLD1Q5BKU9 147 aa12.51□□□□□ -0.41
CHPT1-209ENST00000552329 GMPR2Q9P2T1 348 aaKnown RBP12.51□□□□□ -0.41
CHPT1-209ENST00000552329 LILRA1O75019 489 aa12.5□□□□□ -0.41
CHPT1-209ENST00000552329 RELBQ01201 579 aa12.5□□□□□ -0.41
CHPT1-209ENST00000552329 MRPL14Q6P1L8 145 aaKnown RBP12.5□□□□□ -0.41
CHPT1-209ENST00000552329 PHTF2Q8N3S3 785 aa12.5□□□□□ -0.41
CHPT1-209ENST00000552329 DOLKQ9UPQ8 538 aa12.5□□□□□ -0.41
CHPT1-209ENST00000552329 MEIOBQ8N635 442 aa12.49□□□□□ -0.41
CHPT1-209ENST00000552329 CALR3Q96L12 384 aaKnown RBP12.49□□□□□ -0.41
CHPT1-209ENST00000552329 BMP2P12643 396 aa12.48□□□□□ -0.41
CHPT1-209ENST00000552329 SKIP12755 728 aa12.48□□□□□ -0.41
CHPT1-209ENST00000552329 ZFP42Q96MM3 310 aa12.47□□□□□ -0.41
CHPT1-209ENST00000552329 ESF1Q9H501 851 aaKnown RBP12.47□□□□□ -0.41
CHPT1-209ENST00000552329 ZNF395Q9H8N7 513 aaPredicted RBP12.47□□□□□ -0.41
CHPT1-209ENST00000552329 LINC00528Q8N1L1 170 aa12.46□□□□□ -0.41
CHPT1-209ENST00000552329 DEPDC4Q8N2C3 294 aa12.46□□□□□ -0.41
CHPT1-209ENST00000552329 PLPP7Q8NBV4 271 aa12.46□□□□□ -0.41
CHPT1-209ENST00000552329 ARID3CA6NKF2 412 aa12.45□□□□□ -0.42
CHPT1-209ENST00000552329 UPP2O95045 317 aa12.45□□□□□ -0.42
CHPT1-209ENST00000552329 SCARF1Q14162 830 aa12.45□□□□□ -0.42
CHPT1-209ENST00000552329 CC2D2BQ6DHV5 1058 aa12.45□□□□□ -0.42
CHPT1-209ENST00000552329 Q6ZVU0 165 aa12.45□□□□□ -0.42
CHPT1-209ENST00000552329 UCN2Q96RP3 112 aa12.45□□□□□ -0.42
CHPT1-209ENST00000552329 TBC1D9Q6ZT07 1266 aa12.44□□□□□ -0.42
CHPT1-209ENST00000552329 C11orf95C9JLR9 678 aaPredicted RBP12.43□□□□□ -0.42
CHPT1-209ENST00000552329 SNRPBP14678 240 aaKnown RBP12.43□□□□□ -0.42
CHPT1-209ENST00000552329 ERVK-9P63128 1117 aa12.43□□□□□ -0.42
CHPT1-209ENST00000552329 ZNF787Q6DD87 383 aa12.43□□□□□ -0.42
CHPT1-209ENST00000552329 ADH1AP07327 375 aa12.42□□□□□ -0.42
CHPT1-209ENST00000552329 TSEN34Q9BSV6 310 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms