RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 AEBP2Q6ZN18 517 aaPredicted RBP33.77■■■■□ 3
CHPT1-209ENST00000552329 CHIC1Q5VXU3 224 aa32.85■■■□□ 2.85
CHPT1-209ENST00000552329 PHF23Q9BUL5 403 aaPredicted RBP28.97■■■□□ 2.23
CHPT1-209ENST00000552329 SENP3Q9H4L4 574 aaPredicted RBP28.54■■■□□ 2.16
CHPT1-209ENST00000552329 PLPPR3Q6T4P5 718 aa26.66■■□□□ 1.86
CHPT1-209ENST00000552329 FOXD1Q16676 465 aa26.58■■□□□ 1.85
CHPT1-209ENST00000552329 ADRA2BP18089 450 aa25.62■■□□□ 1.69
CHPT1-209ENST00000552329 PPP6R1Q9UPN7 881 aa25.62■■□□□ 1.69
CHPT1-209ENST00000552329 PIAS4Q8N2W9 510 aaPredicted RBP25.09■■□□□ 1.61
CHPT1-209ENST00000552329 MSH5O43196 834 aa24.41■■□□□ 1.5
CHPT1-209ENST00000552329 PPP4R3CPQ6ZMV5 832 aa23.55■■□□□ 1.36
CHPT1-209ENST00000552329 MAPK8IP2Q13387 824 aaPredicted RBP23.29■■□□□ 1.32
CHPT1-209ENST00000552329 SCAF1Q9H7N4 1312 aaKnown RBP23.27■■□□□ 1.32
CHPT1-209ENST00000552329 KCNA4P22459 653 aa23.03■■□□□ 1.28
CHPT1-209ENST00000552329 NCBP3Q53F19 620 aaKnown RBP22.85■■□□□ 1.25
CHPT1-209ENST00000552329 CNKSR2Q8WXI2 1034 aa22.82■■□□□ 1.24
CHPT1-209ENST00000552329 DMRT2Q9Y5R5 561 aa22.78■■□□□ 1.24
CHPT1-209ENST00000552329 NPM3O75607 178 aaKnown RBP22.6■■□□□ 1.21
CHPT1-209ENST00000552329 POTEDQ86YR6 584 aa22.39■■□□□ 1.17
CHPT1-209ENST00000552329 RNF216Q9NWF9 866 aaPredicted RBP22.36■■□□□ 1.17
CHPT1-209ENST00000552329 HOXD11P31277 338 aaPredicted RBP22.27■■□□□ 1.16
CHPT1-209ENST00000552329 DCAF8L1A6NGE4 600 aa22.03■■□□□ 1.12
CHPT1-209ENST00000552329 SLC4A1APQ9BWU0 796 aaKnown RBP21.9■■□□□ 1.1
CHPT1-209ENST00000552329 DNAJC5BQ9UF47 199 aa21.64■■□□□ 1.05
CHPT1-209ENST00000552329 EHMT2Q96KQ7 1210 aa21.41■■□□□ 1.02
CHPT1-209ENST00000552329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.36■■□□□ 1.01
CHPT1-209ENST00000552329 SLC4A2P04920 1241 aa21.34■■□□□ 1.01
CHPT1-209ENST00000552329 ZBTB22O15209 634 aa21.21■□□□□ 0.99
CHPT1-209ENST00000552329 FOXD4L1Q9NU39 408 aa21.12■□□□□ 0.97
CHPT1-209ENST00000552329 CSRNP3Q8WYN3 585 aa21.02■□□□□ 0.96
CHPT1-209ENST00000552329 U3KPZ7 1027 aaPredicted RBP20.98■□□□□ 0.95
CHPT1-209ENST00000552329 RNF39Q9H2S5 420 aa20.96■□□□□ 0.95
CHPT1-209ENST00000552329 MYCNP04198 464 aaPredicted RBP20.81■□□□□ 0.92
CHPT1-209ENST00000552329 C1QBPQ07021 282 aaKnown RBP20.66■□□□□ 0.9
CHPT1-209ENST00000552329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.58■□□□□ 0.89
CHPT1-209ENST00000552329 HNRNPUL2Q1KMD3 747 aaKnown RBP20.58■□□□□ 0.89
CHPT1-209ENST00000552329 SAMD1Q6SPF0 538 aaPredicted RBP20.54■□□□□ 0.88
CHPT1-209ENST00000552329 CACNB1Q02641 598 aaPredicted RBP20.53■□□□□ 0.88
CHPT1-209ENST00000552329 SPINK5Q9NQ38 1064 aaPredicted RBP20.48■□□□□ 0.87
CHPT1-209ENST00000552329 ATF5Q9Y2D1 282 aaPredicted RBP20.41■□□□□ 0.86
CHPT1-209ENST00000552329 CAPN15O75808 1086 aa20.39■□□□□ 0.85
CHPT1-209ENST00000552329 APLP2Q06481 763 aa20.34■□□□□ 0.85
CHPT1-209ENST00000552329 TRHP20396 242 aaPredicted RBP20.32■□□□□ 0.84
CHPT1-209ENST00000552329 ATXN8OSP0DMR3 200 aa20.26■□□□□ 0.83
CHPT1-209ENST00000552329 ZNF219Q9P2Y4 722 aaPredicted RBP20.14■□□□□ 0.81
CHPT1-209ENST00000552329 ABCB7O75027 752 aa20.07■□□□□ 0.8
CHPT1-209ENST00000552329 DSG3P32926 999 aa19.96■□□□□ 0.79
CHPT1-209ENST00000552329 POLA2Q14181 598 aa19.93■□□□□ 0.78
CHPT1-209ENST00000552329 MKRN4PQ13434 485 aaPredicted RBP19.46■□□□□ 0.71
CHPT1-209ENST00000552329 FBLN2P98095 1184 aa19.44■□□□□ 0.7
CHPT1-209ENST00000552329 ZBTB12Q9Y330 459 aaPredicted RBP19.43■□□□□ 0.7
CHPT1-209ENST00000552329 OSCARQ8IYS5 282 aa19.28■□□□□ 0.68
CHPT1-209ENST00000552329 FKBP8Q14318 412 aa19.07■□□□□ 0.64
CHPT1-209ENST00000552329 SPDYE4A6NLX3 237 aa19.01■□□□□ 0.63
CHPT1-209ENST00000552329 ZNF692Q9BU19 519 aaPredicted RBP18.98■□□□□ 0.63
CHPT1-209ENST00000552329 SPDYE2BA6NHP3 402 aa18.94■□□□□ 0.62
CHPT1-209ENST00000552329 SPDYE6P0CI01 402 aa18.94■□□□□ 0.62
CHPT1-209ENST00000552329 SPDYE2Q495Y8 402 aa18.94■□□□□ 0.62
CHPT1-209ENST00000552329 RBM42Q9BTD8 480 aaKnown RBP18.94■□□□□ 0.62
CHPT1-209ENST00000552329 SSUH2Q9Y2M2 353 aa18.8■□□□□ 0.6
CHPT1-209ENST00000552329 PABPN1Q86U42 306 aaKnown RBP eCLIP18.74■□□□□ 0.59
CHPT1-209ENST00000552329 AKT1S1Q96B36 256 aa18.72■□□□□ 0.59
CHPT1-209ENST00000552329 REM2Q8IYK8 340 aaPredicted RBP18.63■□□□□ 0.57
CHPT1-209ENST00000552329 PROM2Q8N271 834 aa18.54■□□□□ 0.56
CHPT1-209ENST00000552329 CLEC11AQ9Y240 323 aa18.5■□□□□ 0.55
CHPT1-209ENST00000552329 PITPNM1O00562 1244 aa18.44■□□□□ 0.54
CHPT1-209ENST00000552329 SPDYE1Q8NFV5 336 aaPredicted RBP18.42■□□□□ 0.54
CHPT1-209ENST00000552329 STAG3Q9UJ98 1225 aa18.28■□□□□ 0.52
CHPT1-209ENST00000552329 CHRDL2Q6WN34 429 aa18.26■□□□□ 0.51
CHPT1-209ENST00000552329 PRR29P0C7W0 189 aa18.24■□□□□ 0.51
CHPT1-209ENST00000552329 FBXO3Q9UK99 471 aa18.24■□□□□ 0.51
CHPT1-209ENST00000552329 MIER1Q8N108 512 aa18.08■□□□□ 0.48
CHPT1-209ENST00000552329 VASPP50552 380 aaPredicted RBP18.07■□□□□ 0.48
CHPT1-209ENST00000552329 CHADLQ6NUI6 762 aa18.07■□□□□ 0.48
CHPT1-209ENST00000552329 PLCD3Q8N3E9 789 aa18.04■□□□□ 0.48
CHPT1-209ENST00000552329 PIP4P2Q8N4L2 257 aa18.04■□□□□ 0.48
CHPT1-209ENST00000552329 FXR2P51116 673 aaKnown RBP eCLIP18.01■□□□□ 0.47
CHPT1-209ENST00000552329 PRKAR2AP13861 404 aaKnown RBP17.99■□□□□ 0.47
CHPT1-209ENST00000552329 CREBZFQ9NS37 354 aa17.98■□□□□ 0.47
CHPT1-209ENST00000552329 PLEKHG5O94827 1062 aa17.88■□□□□ 0.45
CHPT1-209ENST00000552329 IFNLR1Q8IU57 520 aaPredicted RBP17.86■□□□□ 0.45
CHPT1-209ENST00000552329 KLHL34Q8N239 644 aa17.86■□□□□ 0.45
CHPT1-209ENST00000552329 FARP1Q9Y4F1 1045 aaPredicted RBP17.78■□□□□ 0.44
CHPT1-209ENST00000552329 MNX1P50219 401 aaPredicted RBP17.76■□□□□ 0.43
CHPT1-209ENST00000552329 POTEHQ6S545 545 aa17.72■□□□□ 0.43
CHPT1-209ENST00000552329 ZBTB47Q9UFB7 747 aaPredicted RBP17.68■□□□□ 0.42
CHPT1-209ENST00000552329 NPM1P06748 294 aaKnown RBP eCLIP17.63■□□□□ 0.41
CHPT1-209ENST00000552329 SPOCK2Q92563 424 aa17.6■□□□□ 0.41
CHPT1-209ENST00000552329 RASEFQ8IZ41 740 aa17.54■□□□□ 0.4
CHPT1-209ENST00000552329 HAX1O00165 279 aa17.53■□□□□ 0.4
CHPT1-209ENST00000552329 NUBP1P53384 320 aa17.53■□□□□ 0.4
CHPT1-209ENST00000552329 TSPYL2Q9H2G4 693 aaPredicted RBP17.5■□□□□ 0.39
CHPT1-209ENST00000552329 CD44P16070 742 aaKnown RBP17.47■□□□□ 0.39
CHPT1-209ENST00000552329 DCAF8Q5TAQ9 597 aa17.45■□□□□ 0.38
CHPT1-209ENST00000552329 CIZ1Q9ULV3 898 aaPredicted RBP17.45■□□□□ 0.38
CHPT1-209ENST00000552329 C19orf67A6NJJ6 358 aa17.41■□□□□ 0.38
CHPT1-209ENST00000552329 EVX2Q03828 476 aa17.4■□□□□ 0.38
CHPT1-209ENST00000552329 FAM212AQ96EL1 285 aa17.4■□□□□ 0.38
CHPT1-209ENST00000552329 ZRANB1Q9UGI0 708 aa17.39■□□□□ 0.37
CHPT1-209ENST00000552329 PAK3O75914 559 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms