RNA–Protein interactions for RNA: ENST00000551406.5

PPHLN1-216, Transcript of periphilin 1, humanhuman

TSL 2

Gene PPHLN1, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPHLN1-216ENST00000551406 ONECUT3O60422 494 aaPredicted RBP17.35■□□□□ 0.37
PPHLN1-216ENST00000551406 COG3Q96JB2 828 aa17.35■□□□□ 0.37
PPHLN1-216ENST00000551406 GGNBP2Q9H3C7 697 aa17.35■□□□□ 0.37
PPHLN1-216ENST00000551406 LARP1Q6PKG0 1096 aaKnown RBP17.34■□□□□ 0.37
PPHLN1-216ENST00000551406 SPATA31A1Q5TZJ5 1347 aa17.33■□□□□ 0.36
PPHLN1-216ENST00000551406 EVA1CP58658 441 aa17.33■□□□□ 0.36
PPHLN1-216ENST00000551406 PANK3Q9H999 370 aa17.33■□□□□ 0.36
PPHLN1-216ENST00000551406 FBLN1P23142 703 aa17.32■□□□□ 0.36
PPHLN1-216ENST00000551406 FAM98CQ17RN3 349 aaKnown RBP17.32■□□□□ 0.36
PPHLN1-216ENST00000551406 ABCC6O95255 1503 aa17.31■□□□□ 0.36
PPHLN1-216ENST00000551406 KIF20BQ96Q89 1820 aa17.31■□□□□ 0.36
PPHLN1-216ENST00000551406 SEPT12Q8IYM1 358 aa17.31■□□□□ 0.36
PPHLN1-216ENST00000551406 EP400Q96L91 3159 aa17.31■□□□□ 0.36
PPHLN1-216ENST00000551406 WASHC2AQ641Q2 1341 aa17.3■□□□□ 0.36
PPHLN1-216ENST00000551406 LTN1O94822 1766 aa17.3■□□□□ 0.36
PPHLN1-216ENST00000551406 CGNL1Q0VF96 1302 aa17.29■□□□□ 0.36
PPHLN1-216ENST00000551406 USP35Q9P2H5 1018 aa17.29■□□□□ 0.36
PPHLN1-216ENST00000551406 CRB1P82279 1406 aa17.29■□□□□ 0.36
PPHLN1-216ENST00000551406 CCDC7Q96M83 1385 aa17.28■□□□□ 0.36
PPHLN1-216ENST00000551406 RGPD5Q99666 1765 aa17.28■□□□□ 0.36
PPHLN1-216ENST00000551406 MAP3K19Q56UN5 1328 aa17.28■□□□□ 0.36
PPHLN1-216ENST00000551406 WDR17Q8IZU2 1322 aa17.28■□□□□ 0.36
PPHLN1-216ENST00000551406 THSD7AQ9UPZ6 1657 aa17.28■□□□□ 0.36
PPHLN1-216ENST00000551406 BRWD3Q6RI45 1802 aa17.26■□□□□ 0.35
PPHLN1-216ENST00000551406 CACNB1Q02641 598 aaPredicted RBP17.26■□□□□ 0.35
PPHLN1-216ENST00000551406 RRS1Q15050 365 aaKnown RBP17.26■□□□□ 0.35
PPHLN1-216ENST00000551406 BARGINQ6ZT62 677 aa17.26■□□□□ 0.35
PPHLN1-216ENST00000551406 TCP11L2Q8N4U5 519 aa17.26■□□□□ 0.35
PPHLN1-216ENST00000551406 IP6K1Q92551 441 aa17.26■□□□□ 0.35
PPHLN1-216ENST00000551406 ERBB3P21860 1342 aa17.25■□□□□ 0.35
PPHLN1-216ENST00000551406 TOM1L2Q6ZVM7 507 aa17.25■□□□□ 0.35
PPHLN1-216ENST00000551406 UPF1Q92900 1129 aaKnown RBP eCLIP17.25■□□□□ 0.35
PPHLN1-216ENST00000551406 BLMP54132 1417 aaPredicted RBP17.24■□□□□ 0.35
PPHLN1-216ENST00000551406 A0A0G2JS52 829 aa17.24■□□□□ 0.35
PPHLN1-216ENST00000551406 MYT1Q01538 1121 aa17.24■□□□□ 0.35
PPHLN1-216ENST00000551406 THRAP3Q9Y2W1 955 aaKnown RBP17.24■□□□□ 0.35
PPHLN1-216ENST00000551406 CSB-PGBD3P0DP91 1061 aa17.23■□□□□ 0.35
PPHLN1-216ENST00000551406 HOXC9P31274 260 aa17.23■□□□□ 0.35
PPHLN1-216ENST00000551406 KRT27Q7Z3Y8 459 aa17.23■□□□□ 0.35
PPHLN1-216ENST00000551406 ANKRD24Q8TF21 1146 aa17.23■□□□□ 0.35
PPHLN1-216ENST00000551406 PER1O15534 1290 aaPredicted RBP17.22■□□□□ 0.35
PPHLN1-216ENST00000551406 AMPHP49418 695 aa17.22■□□□□ 0.35
PPHLN1-216ENST00000551406 CARD10Q9BWT7 1032 aa17.22■□□□□ 0.35
PPHLN1-216ENST00000551406 RTL1A6NKG5 1358 aa17.22■□□□□ 0.35
PPHLN1-216ENST00000551406 KNSTRNQ9Y448 316 aa17.21■□□□□ 0.35
PPHLN1-216ENST00000551406 PEAK1Q9H792 1746 aa17.21■□□□□ 0.35
PPHLN1-216ENST00000551406 NSD2O96028 1365 aa17.2■□□□□ 0.34
PPHLN1-216ENST00000551406 AMER1Q5JTC6 1135 aaPredicted RBP17.2■□□□□ 0.34
PPHLN1-216ENST00000551406 EMILIN1Q9Y6C2 1016 aa17.2■□□□□ 0.34
PPHLN1-216ENST00000551406 ANKRD26Q9UPS8 1709 aa17.2■□□□□ 0.34
PPHLN1-216ENST00000551406 LTV1Q96GA3 475 aaPredicted RBP17.19■□□□□ 0.34
PPHLN1-216ENST00000551406 NLRP2Q9NX02 1062 aa17.19■□□□□ 0.34
PPHLN1-216ENST00000551406 KIF24Q5T7B8 1368 aa17.18■□□□□ 0.34
PPHLN1-216ENST00000551406 TNNT2P45379 298 aaPredicted RBP17.18■□□□□ 0.34
PPHLN1-216ENST00000551406 FAM182BQ5T319 152 aa17.18■□□□□ 0.34
PPHLN1-216ENST00000551406 DISP2A7MBM2 1401 aa17.18■□□□□ 0.34
PPHLN1-216ENST00000551406 FLT4P35916 1363 aa17.17■□□□□ 0.34
PPHLN1-216ENST00000551406 HSP90AB2PQ58FF8 381 aa17.17■□□□□ 0.34
PPHLN1-216ENST00000551406 POLKQ9UBT6 870 aa17.17■□□□□ 0.34
PPHLN1-216ENST00000551406 PARP4Q9UKK3 1724 aaKnown RBP17.17■□□□□ 0.34
PPHLN1-216ENST00000551406 INSRP06213 1382 aa17.16■□□□□ 0.34
PPHLN1-216ENST00000551406 MAPK8IP2Q13387 824 aaPredicted RBP17.16■□□□□ 0.34
PPHLN1-216ENST00000551406 WNK3Q9BYP7 1800 aa17.16■□□□□ 0.34
PPHLN1-216ENST00000551406 LRRC37A3O60309 1634 aa17.15■□□□□ 0.34
PPHLN1-216ENST00000551406 MORC1Q86VD1 984 aa17.15■□□□□ 0.34
PPHLN1-216ENST00000551406 PPM1GO15355 546 aaPredicted RBP17.14■□□□□ 0.33
PPHLN1-216ENST00000551406 ZEB1P37275 1124 aaPredicted RBP17.14■□□□□ 0.33
PPHLN1-216ENST00000551406 CDCA7Q9BWT1 371 aaPredicted RBP17.14■□□□□ 0.33
PPHLN1-216ENST00000551406 FAM208AQ9UK61 1670 aaKnown RBP17.13■□□□□ 0.33
PPHLN1-216ENST00000551406 MAP2P11137 1827 aaKnown RBP17.13■□□□□ 0.33
PPHLN1-216ENST00000551406 PDE3BQ13370 1112 aa17.13■□□□□ 0.33
PPHLN1-216ENST00000551406 NBPF6Q5VWK0 638 aa17.13■□□□□ 0.33
PPHLN1-216ENST00000551406 NBPF4Q96M43 638 aa17.13■□□□□ 0.33
PPHLN1-216ENST00000551406 DDB1Q16531 1140 aa17.12■□□□□ 0.33
PPHLN1-216ENST00000551406 RGPD2P0DJD1 1756 aa17.12■□□□□ 0.33
PPHLN1-216ENST00000551406 SMG6Q86US8 1419 aaKnown RBP17.12■□□□□ 0.33
PPHLN1-216ENST00000551406 IL2RBP14784 551 aa17.11■□□□□ 0.33
PPHLN1-216ENST00000551406 CC2D1BQ5T0F9 858 aaKnown RBP17.11■□□□□ 0.33
PPHLN1-216ENST00000551406 NPC1L1Q9UHC9 1359 aa17.11■□□□□ 0.33
PPHLN1-216ENST00000551406 FAM196AQ6ZSG2 479 aa17.1■□□□□ 0.33
PPHLN1-216ENST00000551406 CCDC125Q86Z20 511 aa17.1■□□□□ 0.33
PPHLN1-216ENST00000551406 USHBP1Q8N6Y0 703 aa17.09■□□□□ 0.33
PPHLN1-216ENST00000551406 MARCH10Q8NA82 808 aaPredicted RBP17.09■□□□□ 0.33
PPHLN1-216ENST00000551406 TNS2Q63HR2 1409 aa17.09■□□□□ 0.33
PPHLN1-216ENST00000551406 EXOC5O00471 708 aa17.08■□□□□ 0.32
PPHLN1-216ENST00000551406 MEGF6O75095 1541 aa17.07■□□□□ 0.32
PPHLN1-216ENST00000551406 EIF4A2Q14240 407 aaKnown RBP17.07■□□□□ 0.32
PPHLN1-216ENST00000551406 OVOS2A0A0G2JMS6 1433 aa17.06■□□□□ 0.32
PPHLN1-216ENST00000551406 NCAPD2Q15021 1401 aa17.06■□□□□ 0.32
PPHLN1-216ENST00000551406 CNGB1Q14028 1251 aaPredicted RBP17.06■□□□□ 0.32
PPHLN1-216ENST00000551406 TRIM37O94972 964 aa17.05■□□□□ 0.32
PPHLN1-216ENST00000551406 EYA1Q99502 592 aa17.05■□□□□ 0.32
PPHLN1-216ENST00000551406 DEFB132Q7Z7B7 95 aa17.04■□□□□ 0.32
PPHLN1-216ENST00000551406 BCL9O00512 1426 aa17.04■□□□□ 0.32
PPHLN1-216ENST00000551406 MTHFSP49914 203 aa17.03■□□□□ 0.32
PPHLN1-216ENST00000551406 TNS1Q9HBL0 1735 aaKnown RBP17.03■□□□□ 0.32
PPHLN1-216ENST00000551406 RGPD1P0DJD0 1748 aa17.02■□□□□ 0.32
PPHLN1-216ENST00000551406 SF3B2Q13435 895 aaKnown RBP17.02■□□□□ 0.32
PPHLN1-216ENST00000551406 PTF1AQ7RTS3 328 aa17.01■□□□□ 0.31
PPHLN1-216ENST00000551406 RAPGEF4Q8WZA2 1011 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms